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2025 Journal Article Simulation of a Free Boundary Cell Migration Model through Physics Informed Neural NetworksMalla, Sanchita, Oelz, Dietmar and Roy, Sitikantha (2025). Simulation of a Free Boundary Cell Migration Model through Physics Informed Neural Networks. Journal of the Mechanical Behavior of Biomedical Materials, 167 106961, 106961. doi: 10.1016/j.jmbbm.2025.106961 |
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2025 Journal Article Stretch-induced recruitment of myosin into transversal actin rings stabilises axonal large cargo transportRahman, Nizhum and Oelz, Dietmar B. (2025). Stretch-induced recruitment of myosin into transversal actin rings stabilises axonal large cargo transport. Mathematical Biosciences, 381 109400, 109400-381. doi: 10.1016/j.mbs.2025.109400 |
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2024 Journal Article A new perspective for scientific modelling: sparse reconstruction based approach for learning time-space fractional differential equationsVats, Yash, Mehra, Mani, Oelz, Dietmar and Singh, Abhishek Kumar (2024). A new perspective for scientific modelling: sparse reconstruction based approach for learning time-space fractional differential equations. Journal of Computational and Nonlinear Dynamics, 19 (12) 121003, 1-8. doi: 10.1115/1.4066330 |
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2024 Journal Article Asymptotic limits of transient patterns in a continuous-space interacting particle systemGonzález-Tokman, Cecilia and Oelz, Dietmar B. (2024). Asymptotic limits of transient patterns in a continuous-space interacting particle system. Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences, 480 (2299) 20230754. doi: 10.1098/rspa.2023.0754 |
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2024 Journal Article Compression-dependent microtubule reinforcement enables cells to navigate confined environmentsJu, Robert J., Falconer, Alistair D., Schmidt, Christanny J., Martinez, Marco A. Enriquez, Dean, Kevin M., Fiolka, Reto P., Sester, David P., Nobis, Max, Timpson, Paul, Lomakin, Alexis J., Danuser, Gaudenz, White, Melanie D., Haass, Nikolas K., Oelz, Dietmar B. and Stehbens, Samantha J. (2024). Compression-dependent microtubule reinforcement enables cells to navigate confined environments. Nature Cell Biology, 26 (9), 1520-1534. doi: 10.1038/s41556-024-01476-x |
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2024 Conference Publication Uncovering Microtubule-driven Mechanisms of Melanoma InvasionJu, R. J., Falconer, A. D., Dean, K. M., Fiolka, R. P., Sester, D. P., Nobis, M., Timpson, P., Lomakin, A. J., Danuser, G., White, M. D., Oelz, D. B., Haass, N. K. and Stehbens, S. J. (2024). Uncovering Microtubule-driven Mechanisms of Melanoma Invasion. 50th Annual Meeting of the Dermatological Research Working Group (ADF), Dusseldorf, Germany, 6-9 March 2024. Chichester, West Sussex United Kingdom: Wiley-Blackwell. |
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2023 Journal Article A mathematical model for axonal transport of large cargo vesiclesRahman, Nizhum and Oelz, Dietmar B. (2023). A mathematical model for axonal transport of large cargo vesicles. Journal of Mathematical Biology, 88 (1) 1, 1-22. doi: 10.1007/s00285-023-02022-3 |
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2023 Journal Article Super-resolved trajectory-derived nanoclustering analysis using spatiotemporal indexingWallis, Tristan P., Jiang, Anmin, Young, Kyle, Hou, Huiyi, Kudo, Kye, McCann, Alex J., Durisic, Nela, Joensuu, Merja, Oelz, Dietmar, Nguyen, Hien, Gormal, Rachel S. and Meunier, Frédéric A. (2023). Super-resolved trajectory-derived nanoclustering analysis using spatiotemporal indexing. Nature Communications, 14 (1) 3353, 1-16. doi: 10.1038/s41467-023-38866-y |
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2023 Other Outputs Data for NASTICWallis, Tristan P., Jiang, Anmin, Young, Kyle, Hou, Huioyi, Kudo, Kye, McCann, Alex, Durisic, Nela, Joensuu, Merja, Oelz, Dietmar, Nguyen, Hien, Gormal, Rachel S. and Meunier, Frederic A. (2023). Data for NASTIC. The University of Queensland. (Dataset) doi: 10.48610/0901bca |
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2023 Conference Publication Fractional order modified Treves model: simulation and learningVats, Yash, Mehra, Mani, Oelz, Dietmar and Gandhi, Saurabh R. (2023). Fractional order modified Treves model: simulation and learning. 2023 International Conference on Fractional Differentiation and Its Applications (ICFDA), Ajman, United Arab Emirates, 14-16 March 2023. Piscataway, NJ, United States: IEEE. doi: 10.1109/icfda58234.2023.10153321 |
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2022 Journal Article F-actin bending facilitates net actomyosin contraction By inhibiting expansion with plus-end-located myosin motorsTam, Alexander K. Y., Mogilner, Alex and Oelz, Dietmar B. (2022). F-actin bending facilitates net actomyosin contraction By inhibiting expansion with plus-end-located myosin motors. Journal of Mathematical Biology, 85 (1) 4, 1-35. doi: 10.1007/s00285-022-01737-z |
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2022 Journal Article Classification and stability analysis of polarising and depolarising travelling wave solutions for a model of collective cell migrationRahman, Nizhum, Marangell, Robert and Oelz, Dietmar (2022). Classification and stability analysis of polarising and depolarising travelling wave solutions for a model of collective cell migration. Applied Mathematics and Computation, 421 126954, 126954. doi: 10.1016/j.amc.2022.126954 |
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2022 Journal Article Spatial redistribution of neurosecretory vesicles upon stimulation accelerates their directed transport to the plasma membraneSchenk, Elaine B., Meunier, Frederic A. and Oelz, Dietmar B. (2022). Spatial redistribution of neurosecretory vesicles upon stimulation accelerates their directed transport to the plasma membrane. PLoS One, 17 (3) e0264521, e0264521. doi: 10.1371/journal.pone.0264521 |
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2021 Journal Article Protein friction and filament bending facilitate contraction of disordered actomyosin networksTam, Alexander K.Y., Mogilner, Alex and Oelz, Dietmar B. (2021). Protein friction and filament bending facilitate contraction of disordered actomyosin networks. Biophysical Journal, 120 (18), 4029-4040. doi: 10.1016/j.bpj.2021.08.012 |
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2021 Journal Article Quasi-steady-state reduction of a model for cytoplasmic transport of secretory vesicles in stimulated chromaffin cellsOelz, Dietmar B. (2021). Quasi-steady-state reduction of a model for cytoplasmic transport of secretory vesicles in stimulated chromaffin cells. Journal of Mathematical Biology, 82 (4) 29, 29. doi: 10.1007/s00285-021-01583-5 |
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2019 Journal Article Polarization wave at the onset of collective cell migrationOelz, Dietmar, Khataee, Hamid, Czirok, Andras and Neufeld, Zoltan (2019). Polarization wave at the onset of collective cell migration. Physical Review E, 100 (3) 032403, 032403. doi: 10.1103/PhysRevE.100.032403 |
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2019 Journal Article Bidirectional sliding of two parallel microtubules generated by multiple identical motorsAllard, Jun, Doumic, Marie, Mogilner, Alex and Oelz, Dietmar (2019). Bidirectional sliding of two parallel microtubules generated by multiple identical motors. Journal of Mathematical Biology, 79 (2), 571-594. doi: 10.1007/s00285-019-01369-w |
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2018 Journal Article Space dependent adhesion forces mediated by transient elastic linkages: new convergence and global existence resultsMilišić, Vuk and Oelz, Dietmar (2018). Space dependent adhesion forces mediated by transient elastic linkages: new convergence and global existence results. Journal of Differential Equations, 265 (12), 6049-6082. doi: 10.1016/j.jde.2018.07.007 |
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2018 Journal Article Microtubule dynamics, kinesin-1 sliding, and dynein action drive growth of cell processesOelz, Dietmar B., del Castillo, Urko, Gelfand, Vladimir I. and Mogilner, Alex (2018). Microtubule dynamics, kinesin-1 sliding, and dynein action drive growth of cell processes. Biophysical Journal, 115 (8), 1614-1624. doi: 10.1016/j.bpj.2018.08.046 |
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2017 Book Chapter Numerical treatment of the Filament-Based Lamellipodium Model (FBLM)Manhart, Angelika , Oelz, Dietmar , Schmeiser, Christian and Sfakianakis, Nikolaos (2017). Numerical treatment of the Filament-Based Lamellipodium Model (FBLM). Modeling cellular systems. (pp. 141-159) edited by Frederik Graw, Franziska Matthäus and Jürgen Pahle. Cham, Switzerland: Springer. doi: 10.1007/978-3-319-45833-5_7 |
