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2025

Journal Article

Molecular epidemiological characteristics of Staphylococcus pseudintermedius, Staphylococcus coagulans, and coagulase-negative staphylococci cultured from clinical canine skin and ear samples in Queensland

Horsman, Sara, Zaugg, Julian, Meler, Erika, Mikkelsen, Deirdre, Soares Magalhães, Ricardo J. and Gibson, Justine S. (2025). Molecular epidemiological characteristics of Staphylococcus pseudintermedius, Staphylococcus coagulans, and coagulase-negative staphylococci cultured from clinical canine skin and ear samples in Queensland. Antibiotics, 14 (1) 80, 1-25. doi: 10.3390/antibiotics14010080

Molecular epidemiological characteristics of Staphylococcus pseudintermedius, Staphylococcus coagulans, and coagulase-negative staphylococci cultured from clinical canine skin and ear samples in Queensland

2025

Journal Article

Prevalence and risk factors of coxiellosis at the human–animal–environment interface in the south asian countries: a systematic review and meta‐analysis

Islam, Md Mazharul, Dutta, Pronesh, Bansal, Devendra, Gongal, Gyanendra, Farag, Elmoubashar, Magalhaes, Ricardo J. Soares, Alawneh, John I., Heller, Jane and Hassan, Mohammad Mahmudul (2025). Prevalence and risk factors of coxiellosis at the human–animal–environment interface in the south asian countries: a systematic review and meta‐analysis. Transboundary and Emerging Diseases, 2025 (1) 2890693, 1-21. doi: 10.1155/tbed/2890693

Prevalence and risk factors of coxiellosis at the human–animal–environment interface in the south asian countries: a systematic review and meta‐analysis

2024

Journal Article

Detection and characterisation of colistin-resistant Escherichia coli in broiler meats

Tanzin, Abu Zubayer, Nath, Chandan, Nayem, Md. Raihan Khan, Sayeed, Md Abu, Khan, Shahneaz Ali, Magalhaes, Ricardo Soares, Alawneh, John I. and Hassan, Mohammad Mahmudul (2024). Detection and characterisation of colistin-resistant Escherichia coli in broiler meats. Microorganisms, 12 (12) 2535, 2535. doi: 10.3390/microorganisms12122535

Detection and characterisation of colistin-resistant Escherichia coli in broiler meats

2024

Journal Article

Climate change: a health emergency for humans, animals, and the environment

Conn, David Bruce and Soares Magalhães, R. J. (2024). Climate change: a health emergency for humans, animals, and the environment. One Health, 19 100867, 1-3. doi: 10.1016/j.onehlt.2024.100867

Climate change: a health emergency for humans, animals, and the environment

2024

Journal Article

Ascertainment of community exposure sites to Ross River virus during the 2020 outbreak in Brisbane, Australia

Proboste, Tatiana, Bista, Damber, Clark, Nicholas J., Arora, Sahil, Devine, Gregor, Darbro, Jonathan M., Malloy, Deena S., Francis, Daniel and Soares Magalhães, Ricardo J. (2024). Ascertainment of community exposure sites to Ross River virus during the 2020 outbreak in Brisbane, Australia. The Journal of Infectious Diseases, 231 (3), e501-e510. doi: 10.1093/infdis/jiae578

Ascertainment of community exposure sites to Ross River virus during the 2020 outbreak in Brisbane, Australia

2024

Journal Article

Design characteristics of integrated surveillance of antimicrobial resistance at the human, animal, and environment interfaces

Hau, Erda Eni Rame, Sly, Peter D., Mikkelsen, Deirdre, Taneja, Neelam, Penjor, Kinley, Ryu, Sukhyun, Donner, Erica, Mollinger, Joanne, Ferreira, Jorge Pinto, Schipp, Mark and Soares Magalhaes, Ricardo J. (2024). Design characteristics of integrated surveillance of antimicrobial resistance at the human, animal, and environment interfaces. CABI Reviews, 19 (1), 1-12. doi: 10.1079/cabireviews.2024.0047

Design characteristics of integrated surveillance of antimicrobial resistance at the human, animal, and environment interfaces

2024

Journal Article

Prevalence of extended‐spectrum beta‐lactamase (ESBL)–producing Escherichia coli in humans, food, and environment in Kathmandu, Nepal: findings from ESBL E. coli tricycle project

Acharya, Jyoti, Jha, Runa, Gompo, Tulsi Ram, Chapagain, Sharmila, Shrestha, Lilee, Rijal, Nisha, Shrestha, Anjana, Koirala, Pragya, Subedi, Suraj, Tamang, Binita, Kattel, Hari Prasad, Khaniya, Bishal, Shrestha, Basudha, Karki, Aruna, Adhikari, Ram Prasad, Kayastha, Sanita, Pradhan, Prasil, Shrestha, Sarada Duwal, Raghubanshi, Bijendra Raj, Tuladhar, Heera, Kansakar, Palpasa, Shrestha, Saugat, Shrestha, Priyanka, Shrestha, Binay, Soares Magalhaes, Ricardo J., Kakkar, Manish, Govindakarnavar, Arunkumar, Gocotano, Allison and Samuel, Reuben (2024). Prevalence of extended‐spectrum beta‐lactamase (ESBL)–producing Escherichia coli in humans, food, and environment in Kathmandu, Nepal: findings from ESBL E. coli tricycle project. International Journal of Microbiology, 2024 (1) 1094816, 1094816. doi: 10.1155/2024/1094816

Prevalence of extended‐spectrum beta‐lactamase (ESBL)–producing Escherichia coli in humans, food, and environment in Kathmandu, Nepal: findings from ESBL E. coli tricycle project

2024

Conference Publication

Geographical variation and co-distribution of antimicrobial resistance and usage for canine skin and ear infections in Queensland: the need for continued integrated surveillance

Horsman, Sara, Gibson, Justine, Meler, Erika, Mikkelsen, Deirdre and Soares Magalhaes, Ricardo (2024). Geographical variation and co-distribution of antimicrobial resistance and usage for canine skin and ear infections in Queensland: the need for continued integrated surveillance. SAAFE CRC 2024 AMR Solutions Summit From AMR Sources to Solutions, Adelaide, SA Australia, 17-18 September 2024.

Geographical variation and co-distribution of antimicrobial resistance and usage for canine skin and ear infections in Queensland: the need for continued integrated surveillance

2024

Conference Publication

Profiling the global frequency of Campylobacter-associated hospitalisations: Systematic review and meta-analyses of outbreak sources and AMR infections

Callaghan, Thomas J., Lau, Colleen, Cobbold, Rowland N., Vilcins, Dwan, Smith, James J., Sherlock, Robin and Soares Magalhães, Ricardo J. (2024). Profiling the global frequency of Campylobacter-associated hospitalisations: Systematic review and meta-analyses of outbreak sources and AMR infections. SAAFE CRC Antimicrobial Resistance Solutions Summit, Adelaide, SA Australia, 17-18 September 2024.

Profiling the global frequency of Campylobacter-associated hospitalisations: Systematic review and meta-analyses of outbreak sources and AMR infections

2024

Journal Article

Assessing perceptions of flea and tick infestation risk in Southeast Queensland, Australia

Proboste, Tatiana, Dennis, Elisa, Soares Magalhães, Ricardo J., Abdullah, Swaid and Clark, Nicholas J. (2024). Assessing perceptions of flea and tick infestation risk in Southeast Queensland, Australia. Veterinary Parasitology: Regional Studies and Reports, 54 101087, 1-7. doi: 10.1016/j.vprsr.2024.101087

Assessing perceptions of flea and tick infestation risk in Southeast Queensland, Australia

2024

Journal Article

A generalizable prioritization protocol for climate-sensitive zoonotic diseases

Castonguay, Adam C., Chowdhury, Sukanta, Shanta, Ireen Sultana, Schrijver, Bente, Schrijver, Remco, Wang, Shiyong and Soares Magalhães, Ricardo J. (2024). A generalizable prioritization protocol for climate-sensitive zoonotic diseases. Tropical Medicine and Infectious Disease, 9 (8) 188, 1-16. doi: 10.3390/tropicalmed9080188

A generalizable prioritization protocol for climate-sensitive zoonotic diseases

2024

Conference Publication

A health impact assessment of tuberculosis notifications attributable to long-term exposure to PM2.5 in Ningxia Hui Autonomous Region, China

Popovic, Igor, Magalhães, Ricardo Soares, Yang, Shukun, Yang, Yurong, Yang, Boyi, Dong, Guanghui, Wei, Xiaolin, Van Buskirk, Joe, Fox, Greg J., Ge, Erjia, Marks, Guy B. and Knibbs, Luke D. (2024). A health impact assessment of tuberculosis notifications attributable to long-term exposure to PM2.5 in Ningxia Hui Autonomous Region, China. ISEE 2024: 36th Annual Conference of the International Society of Environmental Epidemiology, Santiago, Chile, 25-28 August 2024. Research Triangle Park, NC United States: National Institute of Environmental Health Sciences. doi: 10.1289/isee.2024.0569

A health impact assessment of tuberculosis notifications attributable to long-term exposure to PM2.5 in Ningxia Hui Autonomous Region, China

2024

Journal Article

Long-term exposure to ambient fine particulate matter (PM<sub>2.5</sub>) and attributable pulmonary tuberculosis notifications in Ningxia Hui Autonomous Region, China: a health impact assessment

Popovic, Igor, Soares Magalhaes, Ricardo, Yang, Shukun, Yang, Yurong, Yang, Bo-Yi, Dong, Guang-Hui, Wei, Xiaolin, Van Buskirk, Joseph, Fox, Gregory, Ge, Erjia, Marks, Guy and Knibbs, Luke (2024). Long-term exposure to ambient fine particulate matter (PM2.5) and attributable pulmonary tuberculosis notifications in Ningxia Hui Autonomous Region, China: a health impact assessment. BMJ Open, 14 (6) e082312, 1-11. doi: 10.1136/bmjopen-2023-082312

Long-term exposure to ambient fine particulate matter (PM<sub>2.5</sub>) and attributable pulmonary tuberculosis notifications in Ningxia Hui Autonomous Region, China: a health impact assessment

2024

Journal Article

Seroepidemiological survey to cell culture rabies vaccines (CCRV) in Brazil

da Silva, Rodrigo Iais, Chaves, Luciana Botelho, dos Ramos Silva, Sandriana, Katz, Iana Suly Santos, Fernandes, Elaine Raniero, Neto, Rene Cunha, Padovani, Carlos Roberto, Modolo, Jose Rafael, Soares Magalhaes, Ricardo J., Crompton, Holly and Victoria, Cassiano (2024). Seroepidemiological survey to cell culture rabies vaccines (CCRV) in Brazil. One Health, 18 100713, 1-6. doi: 10.1016/j.onehlt.2024.100713

Seroepidemiological survey to cell culture rabies vaccines (CCRV) in Brazil

2024

Journal Article

Introducing CRC SAAFE: a new Cooperative Research Centre (CRC) focused on managing AMR in agriculture and the environment

Donner, E., Soares Magalhães, R. J., Barnes, A. C., Jex, A., Jarocki, V., Drigo, B., Djordjevic, S. and Ashbolt, N. J. (2024). Introducing CRC SAAFE: a new Cooperative Research Centre (CRC) focused on managing AMR in agriculture and the environment. Microbiology Australia, 45 (2), 68-73. doi: 10.1071/ma24021

Introducing CRC SAAFE: a new Cooperative Research Centre (CRC) focused on managing AMR in agriculture and the environment

2024

Journal Article

A scoping review of the evidence on prevalence of feline upper respiratory tract infections and associated risk factors

Kennedy, Uttara, Paterson, Mandy Bryce Allan, Soares Magalhaes, Ricardo, Callaghan, Thomas and Clark, Nicholas (2024). A scoping review of the evidence on prevalence of feline upper respiratory tract infections and associated risk factors. Veterinary Sciences, 11 (6) 232, 232. doi: 10.3390/vetsci11060232

A scoping review of the evidence on prevalence of feline upper respiratory tract infections and associated risk factors

2024

Journal Article

Epidemiological risk factors and modelling approaches for risk assessment of lumpy skin disease virus introduction and spread: methodological review and implications for risk-based surveillance in Australia

Owada, Kei, Mahony, Timothy J., Ambrose, Rebecca K., Hayes, Ben J. and Soares Magalhães, Ricardo J. (2024). Epidemiological risk factors and modelling approaches for risk assessment of lumpy skin disease virus introduction and spread: methodological review and implications for risk-based surveillance in Australia. Transboundary and Emerging Diseases, 2024 (1) 3090226, 1-16. doi: 10.1155/2024/3090226

Epidemiological risk factors and modelling approaches for risk assessment of lumpy skin disease virus introduction and spread: methodological review and implications for risk-based surveillance in Australia

2024

Journal Article

Antimicrobial resistance profiles of Campylobacter spp. recovered from chicken farms in two districts of Bangladesh

Hasan, Mehedi, Talukder, Sudipta, Mandal, Amit Kumar, Tasmim, Syeda Tanjina, Parvin, Sonia, Ali, Yamin, Sikder, Mahmudul Hasan, Callaghan, Thomas J., Soares Magalhaes, Ricardo J. and Islam, Taohidul (2024). Antimicrobial resistance profiles of Campylobacter spp. recovered from chicken farms in two districts of Bangladesh. Foodborne Pathogens and Disease, 22 (2), 118-130. doi: 10.1089/fpd.2023.0079

Antimicrobial resistance profiles of Campylobacter spp. recovered from chicken farms in two districts of Bangladesh

2024

Conference Publication

Molecular epidemiological characteristics of Staphylococcus species cultured from clinical canine skin and ear samples in Queensland

Horsman, Sara, Zaugg, Julian, Mikkelsen, Deirdre, Soares Magalhaes, Ricardo J., Meler, Erika and Gibson, Justine S. (2024). Molecular epidemiological characteristics of Staphylococcus species cultured from clinical canine skin and ear samples in Queensland. Antimicrobials 2024 Annual Scientific Meeting, Sydney, NSW Australia, 15-17 February 2024.

Molecular epidemiological characteristics of Staphylococcus species cultured from clinical canine skin and ear samples in Queensland

2023

Journal Article

Using ecological niche modeling to predict the potential distribution of scrub typhus in Fujian Province, China

Li, Xuan, Wei, Xianyu, Yin, Wenwu, Soares Magalhaes, Ricardo J., Xu, Yuanyong, Wen, Liang, Peng, Hong, Qian, Quan, Sun, Hailong and Zhang, Wenyi (2023). Using ecological niche modeling to predict the potential distribution of scrub typhus in Fujian Province, China. Parasites and Vectors, 16 (1) 44, 44. doi: 10.1186/s13071-023-05668-6

Using ecological niche modeling to predict the potential distribution of scrub typhus in Fujian Province, China