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2025

Journal Article

Development of a zoonotic influenza distribution assessment and ranking system (ZIDAR): Technical application in Nepal to support cross-sectoral risk-based surveillance

Charette-Castonguay, Adam, Gautam, Dipendra, Shrestha, Binay, Ojha, Hemant Chandra, Sharma, Barun Kumar, Upadhayaya, Mukul, Rana, Sujan, Shrestha, Roshika, Chaudhary, Lok Bandu, Kandel, Bhawana, Marasini, Rudra Prasad, Chapagain, Sharmila, Gompo, Tulsi Ram, Karki, Surendra, Poudel, Apsara, Shrestha, Saugat, Kayastha, Avinash Sunny, Govindakarnavar, Arun Kumar, Samuel, Reuben, Gocotano, Allison, Wijesinghe, Pushpa Ranjan, Buddha, Nilesh, Salvador, Edwin Ceniza, Kakkar, Manish and Soares Magalhães, Ricardo J. (2025). Development of a zoonotic influenza distribution assessment and ranking system (ZIDAR): Technical application in Nepal to support cross-sectoral risk-based surveillance. One Health, 20 100975, 1-21. doi: 10.1016/j.onehlt.2025.100975

Development of a zoonotic influenza distribution assessment and ranking system (ZIDAR): Technical application in Nepal to support cross-sectoral risk-based surveillance

2025

Journal Article

High prevalence of low-concentration antimicrobial residues in commercial fish: a public health concern in Bangladesh

Nayem, Md. Raihan Khan, Badsha, Md. Rahim, Rahman, Md. Kaisar, Khan, Shahneaz Ali, Islam, Md Mazharul, Bari, Md. Latiful, Alawneh, John I., Magalhaes, Ricardo J. Soares and Hassan, Mohammad Mahmudul (2025). High prevalence of low-concentration antimicrobial residues in commercial fish: a public health concern in Bangladesh. PLoS One, 20 (5) e0324263, e0324263. doi: 10.1371/journal.pone.0324263

High prevalence of low-concentration antimicrobial residues in commercial fish: a public health concern in Bangladesh

2025

Journal Article

Epidemiology and molecular characterisation of multidrug-resistant Escherichia coli isolated from chicken meat

Khanom, Hamida, Nath, Chandan, Mshelbwala, Philip P., Pasha, Md Ridoan, Magalhaes, Ricardo Soares, Alawneh, John I. and Hassan, Mohammad Mahmudul (2025). Epidemiology and molecular characterisation of multidrug-resistant Escherichia coli isolated from chicken meat. PLoS One, 20 (5) e0323909, e0323909. doi: 10.1371/journal.pone.0323909

Epidemiology and molecular characterisation of multidrug-resistant Escherichia coli isolated from chicken meat

2025

Journal Article

Correction: Rame Hau et al. The prevalence and risk factors associated with the presence of antibiotic residues in milk from peri-urban dairy cattle farms in Kathmandu, Nepal. Antibiotics 2025, 14, 98

Rame Hau, Erda E., Sharma, Minu, Khanal, Bal K. Sharma, Sly, Peter D., Mikkelsen, Deirdre, Clark, Nicholas and Soares Magalhães, Ricardo J. (2025). Correction: Rame Hau et al. The prevalence and risk factors associated with the presence of antibiotic residues in milk from peri-urban dairy cattle farms in Kathmandu, Nepal. Antibiotics 2025, 14, 98. Antibiotics, 14 (5) 473, 1-4. doi: 10.3390/antibiotics14050473

Correction: Rame Hau et al. The prevalence and risk factors associated with the presence of antibiotic residues in milk from peri-urban dairy cattle farms in Kathmandu, Nepal. Antibiotics 2025, 14, 98

2025

Journal Article

Quantifying feral pig interactions to inform disease transmission networks

Proboste, Tatiana, Turnlund, Abigail, Bengsen, Andrew, Gentle, Matthew, Wilson, Cameron, Harriott, Lana, Fuller, Richard A, Marshall, Darren and Soares-Magalhaes, Ricardo J (2025). Quantifying feral pig interactions to inform disease transmission networks. eLife, 13 RP102643. doi: 10.7554/elife.102643

Quantifying feral pig interactions to inform disease transmission networks

2025

Journal Article

Long-term persistent headache after SARS-CoV-2 infection: A follow-up population-based study

Silva, Lenia, Fernandes, Joana, Lopes, Rui, Costa, Sara, Malheiro, Sofia, Aires, Elaine, Pereira, Diogo, Fonte, Joana, Dias, Alexandre, Oliveira, Vanessa, Cavaco, Sara, Magalhaes, Rui, Correia, Manuel, Andrade, Carlos and Maia, Luis F. (2025). Long-term persistent headache after SARS-CoV-2 infection: A follow-up population-based study. European Journal of Neurology, 32 (5) e70130, 1-7. doi: 10.1111/ene.70130

Long-term persistent headache after SARS-CoV-2 infection: A follow-up population-based study

2025

Journal Article

Spatiotemporal analysis of schistosomiasis and soil-transmitted helminth distribution in three highly endemic provinces in Angola

Bartlett, Adam W., Proboste, Tatiana, Mendes, Elsa P., Palmeirim, Marta S., Direito, Ana, Soares Magalhaes, Ricardo J., Lopes, Sergio and Vaz Nery, Susana (2025). Spatiotemporal analysis of schistosomiasis and soil-transmitted helminth distribution in three highly endemic provinces in Angola. PLoS Neglected Tropical Diseases, 19 (4) e0012974, e0012974. doi: 10.1371/journal.pntd.0012974

Spatiotemporal analysis of schistosomiasis and soil-transmitted helminth distribution in three highly endemic provinces in Angola

2025

Journal Article

Identification of visible and near-infrared signature peaks for arboviruses and Plasmodium falciparum

Goh, Brendon, Soares Magalhães, Ricardo J., Ciocchetta, Silvia, Liu, Wenjun and Sikulu-Lord, Maggy T. (2025). Identification of visible and near-infrared signature peaks for arboviruses and Plasmodium falciparum. PLoS One, 20 (4 April) e0321362, 1-17. doi: 10.1371/journal.pone.0321362

Identification of visible and near-infrared signature peaks for arboviruses and Plasmodium falciparum

2025

Journal Article

Environmental exposure and cancer occurrence in dogs: a critical appraisal of evidence

Owada, Kei, Nicholls, Emma, Palmieri, Chiara and Soares Magalhães, Ricardo J. (2025). Environmental exposure and cancer occurrence in dogs: a critical appraisal of evidence. Research in Veterinary Science, 184 105517, 105517-184. doi: 10.1016/j.rvsc.2024.105517

Environmental exposure and cancer occurrence in dogs: a critical appraisal of evidence

2025

Journal Article

Seroprevalence of canine distemper virus antibodies in free-roaming dogs in Cambodia

Wheelhouse, Jaimee, Mak, Sopheap, Legrand, Romain, Eames, Jonathan C., Proboste, Tatiana, Meek, Paul and Soares Magalhães, Ricardo J (2025). Seroprevalence of canine distemper virus antibodies in free-roaming dogs in Cambodia. The Veterinary Journal, 309 106293, 106293. doi: 10.1016/j.tvjl.2024.106293

Seroprevalence of canine distemper virus antibodies in free-roaming dogs in Cambodia

2025

Journal Article

The prevalence and risk factors associated with the presence of antibiotic residues in milk from peri-urban dairy cattle farms in Kathmandu, Nepal

Rame Hau, Erda E. Rame, Sharma, Minu, Khanal, Bal K. Sharma, Sly, Peter D., Mikkelsen, Deirdre, Clark, Nicholas and Soares Magalhães, Ricardo J. Soares (2025). The prevalence and risk factors associated with the presence of antibiotic residues in milk from peri-urban dairy cattle farms in Kathmandu, Nepal. Antibiotics, 14 (1) 98, 1-18. doi: 10.3390/antibiotics14010098

The prevalence and risk factors associated with the presence of antibiotic residues in milk from peri-urban dairy cattle farms in Kathmandu, Nepal

2025

Journal Article

Molecular epidemiological characteristics of Staphylococcus pseudintermedius, Staphylococcus coagulans, and coagulase-negative staphylococci cultured from clinical canine skin and ear samples in Queensland

Horsman, Sara, Zaugg, Julian, Meler, Erika, Mikkelsen, Deirdre, Soares Magalhães, Ricardo J. and Gibson, Justine S. (2025). Molecular epidemiological characteristics of Staphylococcus pseudintermedius, Staphylococcus coagulans, and coagulase-negative staphylococci cultured from clinical canine skin and ear samples in Queensland. Antibiotics, 14 (1) 80, 1-25. doi: 10.3390/antibiotics14010080

Molecular epidemiological characteristics of Staphylococcus pseudintermedius, Staphylococcus coagulans, and coagulase-negative staphylococci cultured from clinical canine skin and ear samples in Queensland

2025

Journal Article

Prevalence and risk factors of coxiellosis at the human–animal–environment interface in the south asian countries: a systematic review and meta‐analysis

Islam, Md Mazharul, Dutta, Pronesh, Bansal, Devendra, Gongal, Gyanendra, Farag, Elmoubashar, Magalhaes, Ricardo J. Soares, Alawneh, John I., Heller, Jane and Hassan, Mohammad Mahmudul (2025). Prevalence and risk factors of coxiellosis at the human–animal–environment interface in the south asian countries: a systematic review and meta‐analysis. Transboundary and Emerging Diseases, 2025 (1) 2890693, 1-21. doi: 10.1155/tbed/2890693

Prevalence and risk factors of coxiellosis at the human–animal–environment interface in the south asian countries: a systematic review and meta‐analysis

2024

Journal Article

Detection and characterisation of colistin-resistant Escherichia coli in broiler meats

Tanzin, Abu Zubayer, Nath, Chandan, Nayem, Md. Raihan Khan, Sayeed, Md Abu, Khan, Shahneaz Ali, Magalhaes, Ricardo Soares, Alawneh, John I. and Hassan, Mohammad Mahmudul (2024). Detection and characterisation of colistin-resistant Escherichia coli in broiler meats. Microorganisms, 12 (12) 2535, 1-13. doi: 10.3390/microorganisms12122535

Detection and characterisation of colistin-resistant Escherichia coli in broiler meats

2024

Journal Article

Climate change: a health emergency for humans, animals, and the environment

Conn, David Bruce and Soares Magalhães, R. J. (2024). Climate change: a health emergency for humans, animals, and the environment. One Health, 19 100867, 1-3. doi: 10.1016/j.onehlt.2024.100867

Climate change: a health emergency for humans, animals, and the environment

2024

Journal Article

Ascertainment of community exposure sites to Ross River virus during the 2020 outbreak in Brisbane, Australia

Proboste, Tatiana, Bista, Damber, Clark, Nicholas J., Arora, Sahil, Devine, Gregor, Darbro, Jonathan M., Malloy, Deena S., Francis, Daniel and Soares Magalhães, Ricardo J. (2024). Ascertainment of community exposure sites to Ross River virus during the 2020 outbreak in Brisbane, Australia. The Journal of Infectious Diseases, 231 (3), e501-e510. doi: 10.1093/infdis/jiae578

Ascertainment of community exposure sites to Ross River virus during the 2020 outbreak in Brisbane, Australia

2024

Journal Article

Design characteristics of integrated surveillance of antimicrobial resistance at the human, animal, and environment interfaces

Hau, Erda Eni Rame, Sly, Peter D., Mikkelsen, Deirdre, Taneja, Neelam, Penjor, Kinley, Ryu, Sukhyun, Donner, Erica, Mollinger, Joanne, Ferreira, Jorge Pinto, Schipp, Mark and Soares Magalhaes, Ricardo J. (2024). Design characteristics of integrated surveillance of antimicrobial resistance at the human, animal, and environment interfaces. CABI Reviews, 19 (1) 0047, 1-12. doi: 10.1079/cabireviews.2024.0047

Design characteristics of integrated surveillance of antimicrobial resistance at the human, animal, and environment interfaces

2024

Journal Article

Chitosan/collagen biomembrane loaded with 2,3-dihydrobenzofuran for the treatment of cutaneous Leishmaniasis

Braz, Elton Marks Araujo, Silva, Solranny Carla Cavalcante Costa, Alves, Michel Mualem Moraes, Carvalho, Fernando Aecio Amorim, Magalhaes, Rui, Osajima, Josy Anteveli, Silva, Durcilene Alves, Oliveira, Ana Leite, Muniz, Edvani Curti and Silva-Filho, Edson Cavalcanti (2024). Chitosan/collagen biomembrane loaded with 2,3-dihydrobenzofuran for the treatment of cutaneous Leishmaniasis. International Journal of Biological Macromolecules, 280 135995, 1-12. doi: 10.1016/j.ijbiomac.2024.135995

Chitosan/collagen biomembrane loaded with 2,3-dihydrobenzofuran for the treatment of cutaneous Leishmaniasis

2024

Journal Article

Prevalence of extended‐spectrum beta‐lactamase (ESBL)–producing Escherichia coli in humans, food, and environment in Kathmandu, Nepal: findings from ESBL E. coli tricycle project

Acharya, Jyoti, Jha, Runa, Gompo, Tulsi Ram, Chapagain, Sharmila, Shrestha, Lilee, Rijal, Nisha, Shrestha, Anjana, Koirala, Pragya, Subedi, Suraj, Tamang, Binita, Kattel, Hari Prasad, Khaniya, Bishal, Shrestha, Basudha, Karki, Aruna, Adhikari, Ram Prasad, Kayastha, Sanita, Pradhan, Prasil, Shrestha, Sarada Duwal, Raghubanshi, Bijendra Raj, Tuladhar, Heera, Kansakar, Palpasa, Shrestha, Saugat, Shrestha, Priyanka, Shrestha, Binay, Soares Magalhaes, Ricardo J., Kakkar, Manish, Govindakarnavar, Arunkumar, Gocotano, Allison and Samuel, Reuben (2024). Prevalence of extended‐spectrum beta‐lactamase (ESBL)–producing Escherichia coli in humans, food, and environment in Kathmandu, Nepal: findings from ESBL E. coli tricycle project. International Journal of Microbiology, 2024 (1) 1094816, 1-14. doi: 10.1155/2024/1094816

Prevalence of extended‐spectrum beta‐lactamase (ESBL)–producing Escherichia coli in humans, food, and environment in Kathmandu, Nepal: findings from ESBL E. coli tricycle project

2024

Conference Publication

Profiling the global frequency of Campylobacter-associated hospitalisations: Systematic review and meta-analyses of outbreak sources and AMR infections

Callaghan, Thomas J., Lau, Colleen, Cobbold, Rowland N., Vilcins, Dwan, Smith, James J., Sherlock, Robin and Soares Magalhães, Ricardo J. (2024). Profiling the global frequency of Campylobacter-associated hospitalisations: Systematic review and meta-analyses of outbreak sources and AMR infections. SAAFE CRC Antimicrobial Resistance Solutions Summit, Adelaide, SA Australia, 17-18 September 2024.

Profiling the global frequency of Campylobacter-associated hospitalisations: Systematic review and meta-analyses of outbreak sources and AMR infections