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2023 Journal Article Multi-breed genomic predictions and functional variants for fertility of tropical bullsPorto-Neto, Laercio R., Alexandre, Pamela A., Hudson, Nicholas J., Bertram, John, McWilliam, Sean M., Tan, Andre W. L., Fortes, Marina R. S., McGowan, Michael R., Hayes, Ben J. and Reverter, Antonio (2023). Multi-breed genomic predictions and functional variants for fertility of tropical bulls. PLoS One, 18 (1) e0279398, 1-19. doi: 10.1371/journal.pone.0279398 |
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2022 Journal Article Utility of multi-omics data to inform genomic prediction of heifer fertility traitsTahir, Muhammad S., Porto-Neto, Laercio R., Reverter, Antonio, Olasege, Babatunde S., Sajid, Mirza R., Wockner, Kimberley B., Tan, Andre W.L. and Fortes, Marina R.S. (2022). Utility of multi-omics data to inform genomic prediction of heifer fertility traits. Journal of Animal Science, 100 (12) skac340, 1-10. doi: 10.1093/jas/skac340 |
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2022 Journal Article Correlation scan: identifying genomic regions that affect genetic correlations applied to fertility traitsOlasege, Babatunde S., Porto-Neto, Laercio R., Tahir, Muhammad S., Gouveia, Gabriela C., Cánovas, Angela, Hayes, Ben J. and Fortes, Marina R. S. (2022). Correlation scan: identifying genomic regions that affect genetic correlations applied to fertility traits. BMC Genomics, 23 (1) 684, 1-20. doi: 10.1186/s12864-022-08898-7 |
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2022 Journal Article Weak genotype x environment interaction suggests that measuring scrotal circumference at 12 and 18 months of age is helpful to select precocious Brahman cattleNascimento, Bárbara M., Carvalheiro, Roberto, de A. Teixeira, Rodrigo, Dias, Laila T and Fortes, Marina R. S. (2022). Weak genotype x environment interaction suggests that measuring scrotal circumference at 12 and 18 months of age is helpful to select precocious Brahman cattle. Journal of Animal Science, 100 (9) skac236, 1-13. doi: 10.1093/jas/skac236 |
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2022 Journal Article Proteomic analysis of hypothalamus and pituitary gland in pre and postpubertal Brahman heifersNguyen, Loan To, Lau, Li Yieng and Fortes, Marina Rufino Salinas (2022). Proteomic analysis of hypothalamus and pituitary gland in pre and postpubertal Brahman heifers. Frontiers in Genetics, 13 935433, 1-15. doi: 10.3389/fgene.2022.935433 |
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2022 Journal Article Alanine-specific appetite in slow growing chickens is associated with impaired glucose transport and TCA cycleNiknafs, Shahram, Fortes, Marina R. S., Cho, Sungbo, Black, John L. and Roura, Eugeni (2022). Alanine-specific appetite in slow growing chickens is associated with impaired glucose transport and TCA cycle. BMC Genomics, 23 (1) 393, 393. doi: 10.1186/s12864-022-08625-2 |
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2021 Journal Article Deafness in Australian Cattle Dogs associated to QTL on chromosome 20 in genome‐wide association study analysesSeddon, J. M., Fortes, M., Kelly‐Smith, M., Sommerlad, S. F., Hayward, J. J., Burmeister, L., De Risio, L., Mellersh, C., Freeman, J. and Strain, G. M. (2021). Deafness in Australian Cattle Dogs associated to QTL on chromosome 20 in genome‐wide association study analyses. Animal Genetics, 52 (5), 694-702. doi: 10.1111/age.13115 |
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2021 Journal Article Chromatin accessibility and regulatory vocabulary across indicine cattle tissuesAlexandre, Pâmela A., Naval-Sánchez, Marina, Menzies, Moira, Nguyen, Loan T., Porto-Neto, Laercio R., Fortes, Marina R. S. and Reverter, Antonio (2021). Chromatin accessibility and regulatory vocabulary across indicine cattle tissues. Genome Biology, 22 (1) 273, 273. doi: 10.1186/s13059-021-02489-7 |
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2021 Journal Article Genetic parameter estimates for male and female fertility traits using genomic data to improve fertility in Australian beef cattleOlasege, Babatunde S., Tahir, Muhammad S., Gouveia, Gabriela C., Kour, Jagish, Porto-Neto, Laercio R., Hayes, Ben J. and Fortes, Marina R. S. (2021). Genetic parameter estimates for male and female fertility traits using genomic data to improve fertility in Australian beef cattle. Animal Production Science, 61 (18), 1863-1872. doi: 10.1071/an21097 |
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2021 Journal Article Meta-analysis of heifer traits identified reproductive pathways in Bos indicus cattleTahir, Muhammad S., Porto-Neto, Laercio R., Gondro, Cedric, Shittu, Olasege B., Wockner, Kimberley, Tan, Andre W. L., Smith, Hugo R., Gouveia, Gabriela C., Kour, Jagish and Fortes, Marina R. S. (2021). Meta-analysis of heifer traits identified reproductive pathways in Bos indicus cattle. Genes, 12 (5) 768, 768. doi: 10.3390/genes12050768 |
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2021 Journal Article Network analyses predict small RNAs that might modulate gene expression in the testis and epididymis of Bos indicus bullsde Lima, Andressa O., Afonso, Juliana, Edson, Janette, Marcellin, Esteban, Palfreyman, Robin, Porto-Neto, Laercio R., Reverter, Antonio and Fortes, Marina R. S. (2021). Network analyses predict small RNAs that might modulate gene expression in the testis and epididymis of Bos indicus bulls. Frontiers in Genetics, 12 610116, 610116. doi: 10.3389/fgene.2021.610116 |
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2021 Journal Article Single nucleotide polymorphisms affect miRNA target prediction in bovinede Sousa, Marco Antônio Perpétuo, de Athayde, Flavia Regina Florêncio, Maldonado, Mariângela Bueno Cordeiro, de Lima, Andressa Oliveira, Fortes, Marina Rufino S. and Lopes, Flavia Lombardi (2021). Single nucleotide polymorphisms affect miRNA target prediction in bovine. PLoS One, 16 (4 April) e0249406, 1-17. doi: 10.1371/journal.pone.0249406 |
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2020 Journal Article Genome-wide co-expression distributions as a metric to prioritize genes of functional importanceAlexandre, Pâmela A., Hudson, Nicholas J., Lehnert, Sigrid A., Fortes, Marina R. S., Naval-Sánchez, Marina, Nguyen, Loan T., Porto-Neto, Laercio R. and Reverter, Antonio (2020). Genome-wide co-expression distributions as a metric to prioritize genes of functional importance. Genes, 11 (10) 1231, 1231-13. doi: 10.3390/genes11101231 |
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2020 Journal Article X chromosome variants are associated with male fertility traits in two bovine populationsFortes, Marina R. S., Porto-Neto, Laercio R., Satake, Nana, Nguyen, Loan T., Freitas, Ana Claudia, Melo, Thaise P., Scalez, Daiane Cristina Becker, Hayes, Ben, Raidan, Fernanda S. S., Reverter, Antonio and Boe-Hansen, Gry B. (2020). X chromosome variants are associated with male fertility traits in two bovine populations. Genetics Selection Evolution, 52 (1) 46, 46. doi: 10.1186/s12711-020-00563-5 |
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2020 Journal Article Dynamics of gene co-expression networks in time-series data: a case study in Drosophila melanogaster embryogenesisLau, Li Yieng, Reverter, Antonio, Hudson, Nicholas J., Naval-Sanchez, Marina, Fortes, Marina R. S. and Alexandre, Pâmela A. (2020). Dynamics of gene co-expression networks in time-series data: a case study in Drosophila melanogaster embryogenesis. Frontiers in Genetics, 11 517, 517. doi: 10.3389/fgene.2020.00517 |
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2020 Journal Article Genetic regulators of mineral amount in Nelore cattle muscle predicted by a new co-expression and regulatory impact factor approachAfonso, Juliana, Fortes, Marina Rufino Salinas, Reverter, Antonio, Diniz, Wellison Jarles da Silva, Cesar, Aline Silva Mello, Lima, Andressa Oliveira de, Petrini, Juliana, de Souza, Marcela M., Coutinho, Luiz Lehmann, Mourão, Gerson Barreto, Zerlotini, Adhemar, Gromboni, Caio Fernando, Nogueira, Ana Rita Araújo and Regitano, Luciana Correia de Almeida (2020). Genetic regulators of mineral amount in Nelore cattle muscle predicted by a new co-expression and regulatory impact factor approach. Scientific Reports, 10 (1) 8436, 8436. doi: 10.1038/s41598-020-65454-7 |
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2020 Journal Article Gene regulation could be attributed to TCF3 and other key transcription factors in the muscle of pubertal heifersLau, Li Yieng, Nguyen, Loan T., Reverter, Antonio, Moore, Stephen S., Lynn, Aaron, McBride‐Kelly, Liam, Phillips‐Rose, Louis, Plath, Mackenzie, Macfarlane, Rhys, Vasudivan, Vanisha, Morton, Lachlan, Ardley, Ryan, Ye, Yunan and Fortes, Marina R. S. (2020). Gene regulation could be attributed to TCF3 and other key transcription factors in the muscle of pubertal heifers. Veterinary Medicine and Science, 6 (4) vms3.278, 695-710. doi: 10.1002/vms3.278 |
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2019 Journal Article Muscle transcriptome analysis reveals genes and metabolic pathways related to mineral concentration in Bos indicusAfonso, Juliana, Coutinho, Luiz Lehmann, Tizioto, Polyana Cristine, da Silva Diniz, Wellison Jarles, de Lima, Andressa Oliveira, Rocha, Marina Ibelli Pereira, Buss, Carlos Eduardo, Andrade, Bruno Gabriel Nascimento, Piaya, Otávio, da Silva, Juliana Virginio, Lins, Laura Albuquerque, Gromboni, Caio Fernando, Nogueira, Ana Rita Araújo, Fortes, Marina Rufino Salinas, Mourao, Gerson Barreto and de Almeida Regitano, Luciana Correia (2019). Muscle transcriptome analysis reveals genes and metabolic pathways related to mineral concentration in Bos indicus. Scientific Reports, 9 (1) 12715, 12715. doi: 10.1038/s41598-019-49089-x |
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2019 Journal Article Proteomics recapitulates ovarian proteins relevant to puberty and fertility in Brahman heifers (Bos indicus L.)Tahir, Muhammad S., Nguyen, Loan T., Schulz, Benjamin L., Boe-Hansen, Gry A., Thomas, Milton G., Moore, Stephen S., Lau, Li Yieng and Fortes, Marina R S (2019). Proteomics recapitulates ovarian proteins relevant to puberty and fertility in Brahman heifers (Bos indicus L.). Genes, 10 (11) 923, 923. doi: 10.3390/genes10110923 |
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2019 Journal Article Genomic clues of the evolutionary history of Bos indicus cattleUtsunomiya, Y. T., Milanesi, M., Fortes, M. R. S., Porto-Neto, L. R., Utsunomiya, A. T. H., Silva, M. V. G. B., Garcia, J. F. and Ajmone-Marsan, P. (2019). Genomic clues of the evolutionary history of Bos indicus cattle. Animal Genetics, 50 (6) age.12836, 557-568. doi: 10.1111/age.12836 |
