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2025 Journal Article Analysis of 30 chromosome-level Drosophila genome assemblies reveals dynamic evolution of centromeric satellite repeatsGebert, Daniel, Hay, Amir D., Hoang, Jennifer P., Gibbon, Adam E., Henderson, Ian R. and Teixeira, Felipe Karam (2025). Analysis of 30 chromosome-level Drosophila genome assemblies reveals dynamic evolution of centromeric satellite repeats. Genome Biology, 26 (1) 63, 1-26. doi: 10.1186/s13059-025-03527-4 |
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2025 Journal Article PIRT-Seq: a high-resolution whole-genome assay to identify protein-coding genesGoodall, Emily C. A., Hodges, Freya, Kok, Weine, Permana, Budi, Cuddihy, Thom, Yang, Zihao, Kahler, Nicole, Shires, Kenneth, Pullela, Karthik, Torres, Von Vergel L., Rooke, Jessica L., Delhaye, Antoine, Collet, Jean-François, Bryant, Jack A., Forde, Brian M., Hemm, Matthew R. and Henderson, Ian R. (2025). PIRT-Seq: a high-resolution whole-genome assay to identify protein-coding genes. Nucleic Acids Research, 53 (15) gkaf774, 1-16. doi: 10.1093/nar/gkaf774 |
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2025 Journal Article Loss of cardiolipin and porins bypasses the essentiality of the sigma E cell envelope stress response in Escherichia coliYang, Zihao, Goodall, Emily C. A., Zhang, Bing, Torres, Von V. L., Rooke, Jessica L., Pullela, Karthik, Da Costa, Rochelle M., Icke, Christopher, Blaskovich, Mark A.T., Legood, Simon, Cunningham, Adam F., Vollmer, Waldemar, Bryant, Jack A. and Henderson, Ian R. (2025). Loss of cardiolipin and porins bypasses the essentiality of the sigma E cell envelope stress response in Escherichia coli. mBio, 16 (9) e01613-25, e0161325. doi: 10.1128/mbio.01613-25 |
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2025 Journal Article Histone variant H2A.W7 represses meiotic crossover formation in Arabidopsis heterochromatinKuo, Pallas, Tock, Andrew J., Liu, Xuexia, Topp, Stephanie D., Zhong, Zhenhui, Henderson, Ian R. and Lambing, Christophe (2025). Histone variant H2A.W7 represses meiotic crossover formation in Arabidopsis heterochromatin. Proceedings of the National Academy of Sciences of the United States of America, 122 (22) e2414166122, 22. doi: 10.1073/pnas.2414166122 |
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2025 Journal Article Centrophilic Retrotransposons of Plant GenomesBousios, Alexandros, Kakutani, Tetsuji and Henderson, Ian R. (2025). Centrophilic Retrotransposons of Plant Genomes. Annual Review of Plant Biology, 76 (1), 579-604. doi: 10.1146/annurev-arplant-083123-082220 |
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2025 Journal Article Genome-wide high-throughput transposon mutagenesis unveils key factors for acidic pH adaptation of Corynebacterium diphtheriaeAntunes, Camila Azevedo, Goodall, Emily C. A., Henderson, Ian R., Wild, David, Mehltretter, Alexander, Ott, Philipp, Hölzl, Markus, Ott, Lisa, Seidel, Gerald and Burkovski, Andreas (2025). Genome-wide high-throughput transposon mutagenesis unveils key factors for acidic pH adaptation of Corynebacterium diphtheriae. Microbiology, 171 (4) 001554. doi: 10.1099/mic.0.001554 |
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2025 Journal Article Discrete and conserved inflammatory signatures drive thrombosis in different organs after Salmonella infectionPerez-Toledo, Marisol, Beristain-Covarrubias, Nonantzin, Pillaye, Jamie, Persaud, Ruby R., Marcial-Juarez, Edith, Jossi, Sian E., Hitchcock, Jessica R., Alshayea, Areej, Channell, William M., Wiersma, Niek T. J., Lamerton, Rachel E., Kavanagh, Dean P., Carestia, Agostina, Horsnell, William G., Henderson, Ian R., Mackman, Nigel, Clark, Andrew R., Jenne, Craig N., Rayes, Julie, Watson, Steve P. and Cunningham, Adam F. (2025). Discrete and conserved inflammatory signatures drive thrombosis in different organs after Salmonella infection. Nature Communications, 16 (1) 2356, 1-16. doi: 10.1038/s41467-025-57466-6 |
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2025 Journal Article The gastric microbiota invade the lamina propria in Helicobacter pylori-associated gastritis and precancerGiddings, Harriet J., Teodosio, Ana, Jones, Jordanne, Mcmurray, Jack L., Hunter, Kelly, Alame, Riad, Gardiner, Isaac, Abdawn, Zainab, Butterworth, William, Henderson, Ian R., Cole, Jeffrey A., Shannon-Lowe, Claire D. and Rossiter-Pearson, Amanda E. (2025). The gastric microbiota invade the lamina propria in Helicobacter pylori-associated gastritis and precancer. Helicobacter, 30 (1) e70016, 1-8. doi: 10.1111/hel.70016 |
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2025 Journal Article Centrophilic retrotransposon integration via CENH3 chromatin in ArabidopsisTsukahara, Sayuri, Bousios, Alexandros, Perez-Roman, Estela, Yamaguchi, Sota, Leduque, Basile, Nakano, Aimi, Naish, Matthew, Osakabe, Akihisa, Toyoda, Atsushi, Ito, Hidetaka, Edera, Alejandro, Tominaga, Sayaka, Juliarni,, Kato, Kae, Oda, Shoko, Inagaki, Soichi, Lorković, Zdravko, Nagaki, Kiyotaka, Berger, Frédéric, Kawabe, Akira, Quadrana, Leandro, Henderson, Ian and Kakutani, Tetsuji (2025). Centrophilic retrotransposon integration via CENH3 chromatin in Arabidopsis. Nature, 637 (8046) 1, 744-748. doi: 10.1038/s41586-024-08319-7 |
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2025 Journal Article COmapper: high-resolution mapping of meiotic crossovers by long-read sequencing in ArabidopsisByun, Dohwan, Son, Namil, Kim, Heejin, Kim, Jaeil, Park, Jihye, Park, Sang-jun, Kim, Hyein, Kim, Jaebeom, Kim, Juhyun, Lee, Seula, Hyun, Youbong, Ziolkowski, Piotr A., Henderson, Ian R. and Choi, Kyuha (2025). COmapper: high-resolution mapping of meiotic crossovers by long-read sequencing in Arabidopsis. New Phytologist, 247 (4), 1942-1957. doi: 10.1111/nph.70304 |
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2025 Journal Article Natural product-derived compounds in clinical trials and drug approvalsButler, Mark S., Capon, Robert J., Blaskovich, Mark A. T. and Henderson, Ian R. (2025). Natural product-derived compounds in clinical trials and drug approvals. Natural Product Reports. doi: 10.1039/d5np00031a |
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2024 Journal Article Distinct neutralising and complement-fixing antibody responses can be induced to the same antigen in haemodialysis patients after immunisation with different vaccine platformsWall, Nadezhda, Lamerton, Rachel, Ashford, Fiona, Perez-Toledo, Marisol, Jasiulewicz, Aleksandra, Banham, Gemma D., Newby, Maddy L., Faustini, Sian E., Richter, Alex G., Selvaskandan, Haresh, Billany, Roseanne E., Adenwalla, Sherna F., Henderson, Ian R., Crispin, Max, Graham-Brown, Matthew, Harper, Lorraine and Cunningham, Adam F. (2024). Distinct neutralising and complement-fixing antibody responses can be induced to the same antigen in haemodialysis patients after immunisation with different vaccine platforms. Vaccines, 13 (1) 7, 1-17. doi: 10.3390/vaccines13010007 |
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2024 Journal Article Structural variation and DNA methylation shape the centromere-proximal meiotic crossover landscape in ArabidopsisFernandes, Joiselle B., Naish, Matthew, Lian, Qichao, Burns, Robin, Tock, Andrew J., Rabanal, Fernando A., Wlodzimierz, Piotr, Habring, Anette, Nicholas, Robert E., Weigel, Detlef, Mercier, Raphael and Henderson, Ian R. (2024). Structural variation and DNA methylation shape the centromere-proximal meiotic crossover landscape in Arabidopsis. Genome Biology, 25 (1) 30. doi: 10.1186/s13059-024-03163-4 |
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2024 Journal Article A review of antibacterial candidates with new modes of actionButler, Mark S., Vollmer, Waldemar, Goodall, Emily C. A., Capon, Robert J., Henderson, Ian R. and Blaskovich, Mark A. T. (2024). A review of antibacterial candidates with new modes of action. ACS Infectious Diseases, 10 (10), 3440-3474. doi: 10.1021/acsinfecdis.4c00218 |
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2024 Journal Article Genome-wide fitness analysis of Salmonella enterica reveals aroA mutants are attenuated due to iron restriction in vitroRooke, Jessica L., Goodall, Emily C. A., Pullela, Karthik, Da Costa, Rochelle, Martinelli, Nicole, Smith, Chelsie, Mora, Maria, Cunningham, Adam F. and Henderson, Ian R. (2024). Genome-wide fitness analysis of Salmonella enterica reveals aroA mutants are attenuated due to iron restriction in vitro. mBio, 15 (10), 1-17. doi: 10.1128/mbio.03319-23 |
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2024 Journal Article Type 5 secretion system antigens as vaccines against Gram-negative bacterial infectionsDa Costa, Rochelle M., Rooke, Jessica L., Wells, Timothy J., Cunningham, Adam F. and Henderson, Ian R. (2024). Type 5 secretion system antigens as vaccines against Gram-negative bacterial infections. npj Vaccines, 9 (1) 159, 159. doi: 10.1038/s41541-024-00953-6 |
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2024 Journal Article Transposon mutagenesis screen in Klebsiella pneumoniae identifies genetic determinants required for growth in human urine and serumGray, Jessica, Torres, Von Vergel L., Goodall, Emily, McKeand, Samantha A., Scales, Danielle, Collins, Christy, Wetherall, Laura, Lian, Zheng Jie, Bryant, Jack A., Milner, Matthew T., Dunne, Karl A., Icke, Christopher, Rooke, Jessica L., Schneiders, Thamarai, Lund, Peter A., Cunningham, Adam F., Cole, Jeff A. and Henderson, Ian R. (2024). Transposon mutagenesis screen in Klebsiella pneumoniae identifies genetic determinants required for growth in human urine and serum. eLife, 12 RP88971, 1-27. doi: 10.7554/elife.88971.3 |
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2024 Journal Article Mechanisms of antibody-dependent enhancement of infectious diseaseWells, Timothy J., Esposito, Tyron, Henderson, Ian R. and Labzin, Larisa I. (2024). Mechanisms of antibody-dependent enhancement of infectious disease. Nature Reviews Immunology, 25 (1) e33073, 6-21. doi: 10.1038/s41577-024-01067-9 |
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2024 Journal Article Loading the Centromere during Embryogenesis: NASP Functions in de Novo CENH3 DepositionNaish, Matthew and Henderson, Ian R. (2024). Loading the Centromere during Embryogenesis: NASP Functions in de Novo CENH3 Deposition. Plant and Cell Physiology, 65 (7), 1081-1082. doi: 10.1093/pcp/pcae068 |
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2024 Journal Article Antibody-mediated serum resistance protects Pseudomonas aeruginosa during bloodstream infectionsHickson, Sarah M., Hoehensteiger, Johannes K., Mayer-Coverdale, Johanna, Torres, Von Vergel L., Feng, Wenkang, Monteith, Joshua N., Henderson, Ian R., McCarthy, Kate L. and Wells, Timothy J. (2024). Antibody-mediated serum resistance protects Pseudomonas aeruginosa during bloodstream infections. The Journal of Infectious Diseases, 230 (2), e221-e229. doi: 10.1093/infdis/jiad457 |
