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2022 Journal Article The core bacterial microbiome of banana (Musa spp.)Birt, Henry W. G., Pattison, Anthony B., Skarshewski, Adam, Daniells, Jeff, Raghavendra, Anil and Dennis, Paul G. (2022). The core bacterial microbiome of banana (Musa spp.). Environmental Microbiomes, 17 (1) 46, 46. doi: 10.1186/s40793-022-00442-0 |
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2022 Journal Article Draft genome sequences of Dickeya species associated with soft rot diseases in pineapple (Ananas comosus) and banana (Musa spp.)Young, Anthony J., Birt, Henry W. G., Vaghefi, Niloofar, Hoelzle, Robert D. and Dennis, Paul G. (2022). Draft genome sequences of Dickeya species associated with soft rot diseases in pineapple (Ananas comosus) and banana (Musa spp.). Microbiology Resource Announcements, 11 (11), e0071622. doi: 10.1128/mra.00716-22 |
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2022 Journal Article Draft genome sequences of Robbsia andropogonis isolated from Sorghum bicolor exhibiting bacterial leaf stripe in AustraliaYoung, Anthony J., Birt, Henry W. G., Hoelzle, Robert D. and Dennis, Paul G. (2022). Draft genome sequences of Robbsia andropogonis isolated from Sorghum bicolor exhibiting bacterial leaf stripe in Australia. Microbiology Resource Announcements, 11 (10) e0024722, e0024722. doi: 10.1128/mra.00247-22 |
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2022 Conference Publication Association between dietary fibre, microbial metabolites and airway obstruction in COPD patients and murine modelsBudden, K., Rehman, S. F., Shukla, S., Bowerman, K., Donovan, C., Gomez, H., Alemao, C., Wood, L., Dennis, P., Hugenholtz, P., Wark, P. and Hansbro, P. (2022). Association between dietary fibre, microbial metabolites and airway obstruction in COPD patients and murine models. ERS International Congress 2022, Barcelona, Spain, 4-6 September 2022. Sheffield, United Kingdom: European Respiratory Society. doi: 10.1183/13993003.congress-2022.3289 |
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2022 Journal Article Nitrogen fertilizer rate but not form affects the severity of Fusarium wilt in bananaOrr, Ryan, Dennis, Paul G., Wong, Yide, Browne, Daniel J., Cooper, Martha, Birt, Henry W. G., Lapis-Gaza, Hazel R., Pattison, Anthony B. and Nelson, Paul N. (2022). Nitrogen fertilizer rate but not form affects the severity of Fusarium wilt in banana. Frontiers in Plant Science, 13 907819, 907819. doi: 10.3389/fpls.2022.907819 |
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2022 Journal Article Cropping system diversification influences soil microbial diversity in subtropical dryland farming systemsWilliams, Alwyn, Birt, Henry W. G., Raghavendra, Anil and Dennis, Paul G. (2022). Cropping system diversification influences soil microbial diversity in subtropical dryland farming systems. Microbial Ecology, 85 (4), 1-12. doi: 10.1007/s00248-022-02074-w |
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2021 Journal Article Manipulating exudate composition from root apices shapes the microbiome throughout the root systemKawasaki, Akitomo, Dennis, Paul G., Forstner, Christian, Raghavendra, Anil K.H., Mathesius, Ulrike, Richardson, Alan E., Delhaize, Emmanuel, Gilliham, Matthew, Watt, Michelle and Ryan, Peter R. (2021). Manipulating exudate composition from root apices shapes the microbiome throughout the root system. Plant Physiology, 187 (4), 2279-2295. doi: 10.1093/plphys/kiab337 |
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2021 Journal Article Simple solution to preserve plant samples for microbiome analysesCarvalhais, Lilia C., Dennis, Paul G., Poudel, Amrit, Birt, Henry W. G., Bhuiyan, Shamsul A., Card, Stuart D. and Joyce, Priya A. (2021). Simple solution to preserve plant samples for microbiome analyses. Molecular Ecology Resources, 22 (3), 1055-1064. doi: 10.1111/1755-0998.13538 |
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2021 Journal Article Plant-produced bacteriocins inhibit plant pathogens and confer disease resistance in tomatoMirzaee, Hooman, Neira Peralta, Noelia L., Carvalhais, Lilia C., Dennis, Paul G. and Schenk, Peer M. (2021). Plant-produced bacteriocins inhibit plant pathogens and confer disease resistance in tomato. New Biotechnology, 63, 54-61. doi: 10.1016/j.nbt.2021.03.003 |
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2021 Journal Article Soil organic carbon is significantly associated with the pore geometry, microbial diversity and enzyme activity of the macro-aggregates under different land usesBhattacharyya, Ranjan, Rabbi, Sheikh M.F., Zhang, Yaqi, Young, Iain M., Jones, Andrew R., Dennis, Paul G., Menzies, Neal W., Kopittke, Peter M. and Dalal, Ram C. (2021). Soil organic carbon is significantly associated with the pore geometry, microbial diversity and enzyme activity of the macro-aggregates under different land uses. Science of the Total Environment, 778 146286, 1-10. doi: 10.1016/j.scitotenv.2021.146286 |
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2021 Journal Article Long-term changes in land use influence phosphorus concentrations, speciation, and cycling within subtropical soilsZhang, Yaqi, Finn, Damien, Bhattacharyya, Ranjan, Dennis, Paul G., Doolette, Ashlea L., Smernik, Ronald J., Dalal, Ram C., Meyer, Gregor, Lombi, Enzo, Klysubun, Wantana, Jones, Andrew R., Wang, Peng, Menzies, Neal W. and Kopittke, Peter M. (2021). Long-term changes in land use influence phosphorus concentrations, speciation, and cycling within subtropical soils. Geoderma, 393 115010, 1-13. doi: 10.1016/j.geoderma.2021.115010 |
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2021 Journal Article The microbiomes on the roots of wheat (Triticum aestivum L.) and rice (Oryza sativa L.) exhibit significant differences in structure between root types and along root axesKawasaki, Akitomo, Dennis, Paul G., Forstner, Christian, Raghavendra, Anil K. H., Richardson, Alan E., Watt, Michelle, Mathesius, Ulrike, Gilliham, Matthew and Ryan, Peter R. (2021). The microbiomes on the roots of wheat (Triticum aestivum L.) and rice (Oryza sativa L.) exhibit significant differences in structure between root types and along root axes. Functional Plant Biology, 48 (9), 871-888. doi: 10.1071/FP20351 |
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2021 Journal Article Drivers of bacterial diversity along a natural transect from freshwater to saline subtropical wetlandsChuvochina, Maria, Adame, Maria Fernanda, Guyot, Adrien, Lovelock, Catherine, Lockington, David, Gamboa-Cutz, Julieta N. and Dennis, Paul G. (2021). Drivers of bacterial diversity along a natural transect from freshwater to saline subtropical wetlands. Science of the Total Environment, 759 143455, 1-8. doi: 10.1016/j.scitotenv.2020.143455 |
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2021 Journal Article Regional diversity of maritime Antarctic soil fungi and predicted responses of guilds and growth forms to climate changeNewsham, Kevin K., Davey, Marie L., Hopkins, David W. and Dennis, Paul G. (2021). Regional diversity of maritime Antarctic soil fungi and predicted responses of guilds and growth forms to climate change. Frontiers in Microbiology, 11 615659. doi: 10.3389/fmicb.2020.615659 |
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2021 Book Chapter Inference and analysis of spiec-easi microbiome networksBirt, Henry W. G. and Dennis, Paul G. (2021). Inference and analysis of spiec-easi microbiome networks. The Plant Microbiome: Methods and Protocols. (pp. 155-171) New York, NY United States: Humana Press. doi: 10.1007/978-1-0716-1040-4_14 |
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2021 Book Chapter Sampling microbiomes associated with different plant compartmentsBirt, Henry W. G., Pattison, Anthony B. and Dennis, Paul G. (2021). Sampling microbiomes associated with different plant compartments. The Plant Microbiome: Methods and Protocols. (pp. 23-29) New York, NY United States: Humana Press. doi: 10.1007/978-1-0716-1040-4_2 |
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2021 Journal Article PrefaceCarvalhais, Lilia C. and Dennis, Paul G. (2021). Preface. Methods in Molecular Biology, 2232, v-vi. doi: 10.4337/9781784714802.00005 |
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2020 Book Chapter A bait-trap assay to characterize soil microbes that exhibit chemotaxis to root exudatesWeigh, Katherine V., Batista, Bruna D. and Dennis, Paul G. (2020). A bait-trap assay to characterize soil microbes that exhibit chemotaxis to root exudates. The plant microbiome: methods and protocols. (pp. 283-289) edited by Lilia C. Carvalhais and Paul G. Dennis. New York, NY USA: Humana New York. doi: 10.1007/978-1-0716-1040-4_21 |
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2020 Journal Article Wastewater treatment processing of silver nanoparticles strongly influences their effects on soil microbial diversityForstner, Christian, Orton, Thomas G., Wang, Peng, Kopittke, Peter M. and Dennis, Paul G. (2020). Wastewater treatment processing of silver nanoparticles strongly influences their effects on soil microbial diversity. Environmental Science and Technology, 54 (21) acs.est.0c01312, 13538-13547. doi: 10.1021/acs.est.0c01312 |
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2020 Journal Article Significant effects on soil microbial communities were not detected after strategic tillage following 44 years of conventional or no-tillage managementRincon-Florez, Vivian A., Carvalhais, Lilia C., Dang, Yash P., Crawford, Mark H., Schenk, Peer M. and Dennis, Paul G. (2020). Significant effects on soil microbial communities were not detected after strategic tillage following 44 years of conventional or no-tillage management. Pedobiologia, 80 150640, 150640. doi: 10.1016/j.pedobi.2020.150640 |
