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2023

Journal Article

The effects of UV light and methyl salicylate on phytochemical constituents and nutritional traits in common bean (Phaseolus vulgaris L.)

Ha, P. T.T., Tran, N. T.B., Tuyen, P. T., Mason, P., Henry, R. J. and Loi, T. T. (2023). The effects of UV light and methyl salicylate on phytochemical constituents and nutritional traits in common bean (Phaseolus vulgaris L.). Legume Research, 46 (12) LRF-754, 1597-1603. doi: 10.18805/LRF-754

The effects of UV light and methyl salicylate on phytochemical constituents and nutritional traits in common bean (Phaseolus vulgaris L.)

2023

Journal Article

Haplotype resolved chromosome level genome assembly of Citrus australis reveals disease resistance and other citrus specific genes

Nakandala, Upuli, Masouleh, Ardashir Kharabian, Smith, Malcolm W., Furtado, Agnelo, Mason, Patrick, Constantin, Lena and Henry, Robert J. (2023). Haplotype resolved chromosome level genome assembly of Citrus australis reveals disease resistance and other citrus specific genes. Horticulture Research, 10 (05) uhad058, 1-14. doi: 10.1093/hr/uhad058

Haplotype resolved chromosome level genome assembly of Citrus australis reveals disease resistance and other citrus specific genes

2023

Journal Article

Organ-specific expression of genes associated with the UDP-glucose metabolism in sugarcane (Saccharum spp. hybrids)

Mason, Patrick J., Hoang, Nam V., Botha, Frederik C., Furtado, Agnelo, Marquardt, Annelie and Henry, Robert J. (2023). Organ-specific expression of genes associated with the UDP-glucose metabolism in sugarcane (Saccharum spp. hybrids). BMC Genomics, 24 (1) 18, 1-18. doi: 10.1186/s12864-023-09124-8

Organ-specific expression of genes associated with the UDP-glucose metabolism in sugarcane (Saccharum spp. hybrids)

2022

Journal Article

Comparison of the root, leaf and internode transcriptomes in sugarcane (Saccharum spp. hybrids)

Mason, Patrick J., Hoang, Nam V., Botha, Frederik C., Furtado, Agnelo, Marquardt, Annelie and Henry, Robert J. (2022). Comparison of the root, leaf and internode transcriptomes in sugarcane (Saccharum spp. hybrids). Current Research in Biotechnology, 4, 167-178. doi: 10.1016/j.crbiot.2022.02.005

Comparison of the root, leaf and internode transcriptomes in sugarcane (Saccharum spp. hybrids)

2021

Book Chapter

Transcriptome of sugarcane, a highly complex polyploid

Thirugnanasambandam, Prathima P., Mason, Patrick J., Pazhany, Adhini S., Shanmugavel, SenthilKumar, Hoang, Nam V. and Henry, Robert J. (2021). Transcriptome of sugarcane, a highly complex polyploid. Comprehensive foodomics. (pp. 614-626) edited by Alejandro Cifuentes. Amsterdam, Netherlands: Elsevier. doi: 10.1016/b978-0-08-100596-5.22734-0

Transcriptome of sugarcane, a highly complex polyploid

2020

Journal Article

Variation in sugarcane biomass composition and enzymatic saccharification of leaves, internodes and roots

Mason, Patrick J., Furtado, Agnelo, Marquardt, Annelie, Hodgson-Kratky, Katrina, Hoang, Nam V., Botha, Frederik C., Papa, Gabriella, Mortimer, Jenny C., Simmons, Blake and Henry, Robert J. (2020). Variation in sugarcane biomass composition and enzymatic saccharification of leaves, internodes and roots. Biotechnology for Biofuels, 13 (1) 201, 1-19. doi: 10.1186/s13068-020-01837-2

Variation in sugarcane biomass composition and enzymatic saccharification of leaves, internodes and roots

2020

Other Outputs

Investigating the transcriptional control of UDP-glucose metabolism in sugarcane

Mason, Patrick John (2020). Investigating the transcriptional control of UDP-glucose metabolism in sugarcane. PhD Thesis, Queensland Alliance for Agriculture and Food Innovation (QAAFI), The University of Queensland. doi: 10.14264/uql.2020.961

Investigating the transcriptional control of UDP-glucose metabolism in sugarcane

2019

Journal Article

Analysis of the diversity and tissue specificity of sucrose synthase genes in the long read transcriptome of sugarcane

Thirugnanasambandam, Prathima P., Mason, Patrick J., Hoang, Nam V., Furtado, Agnelo, Botha, Frederik C. and Henry, Robert J. (2019). Analysis of the diversity and tissue specificity of sucrose synthase genes in the long read transcriptome of sugarcane. BMC Plant Biology, 19 (1) 160, 160. doi: 10.1186/s12870-019-1733-y

Analysis of the diversity and tissue specificity of sucrose synthase genes in the long read transcriptome of sugarcane

2017

Journal Article

A survey of the complex transcriptome from the highly polyploid sugarcane genome using full-length isoform sequencing and de novo assembly from short read sequencing

Hoang, Nam V., Furtado, Agnelo, Mason, Patrick J., Marquardt, Annelie, Kasirajan, Lakshmi, Thirugnanasambandam, Prathima P., Botha, Frederik C. and Henry, Robert J. (2017). A survey of the complex transcriptome from the highly polyploid sugarcane genome using full-length isoform sequencing and de novo assembly from short read sequencing. BMC Genomics, 18 (1) 395, 395. doi: 10.1186/s12864-017-3757-8

A survey of the complex transcriptome from the highly polyploid sugarcane genome using full-length isoform sequencing and de novo assembly from short read sequencing