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2024

Journal Article

A molecular toolkit of cross-feeding strains for engineering synthetic yeast communities

Peng, Huadong, Darlington, Alexander P. S., South, Eric J., Chen, Hao-Hong, Jiang, Wei and Ledesma-Amaro, Rodrigo (2024). A molecular toolkit of cross-feeding strains for engineering synthetic yeast communities. Nature Microbiology, 9 (3), 848-863. doi: 10.1038/s41564-023-01596-4

A molecular toolkit of cross-feeding strains for engineering synthetic yeast communities

2023

Journal Article

Spontaneously established syntrophic yeast communities improve bioproduction

Aulakh, Simran Kaur, Sellés Vidal, Lara, South, Eric J., Peng, Huadong, Varma, Sreejith Jayasree, Herrera-Dominguez, Lucia, Ralser, Markus and Ledesma-Amaro, Rodrigo (2023). Spontaneously established syntrophic yeast communities improve bioproduction. Nature Chemical Biology, 19 (8), 951-961. doi: 10.1038/s41589-023-01341-2

Spontaneously established syntrophic yeast communities improve bioproduction

2023

Journal Article

Modular metabolic engineering and synthetic coculture strategies for the production of aromatic compounds in yeast

Peng, Huadong, Chen, Ruiqi, Shaw, William M., Hapeta, Piotr, Jiang, Wei, Bell, David J., Ellis, Tom and Ledesma-Amaro, Rodrigo (2023). Modular metabolic engineering and synthetic coculture strategies for the production of aromatic compounds in yeast. ACS Synthetic Biology, 12 (6), 1739-1749. doi: 10.1021/acssynbio.3c00047

Modular metabolic engineering and synthetic coculture strategies for the production of aromatic compounds in yeast

2026

Journal Article

Synthetic biology for sustainable food colourant production: Innovations and opportunities

Peng, Bingyin, Jahanian, Ali, Collier, Thomas R., Peng, Huadong, Behrendorff, James B. and Speight, Robert E. (2026). Synthetic biology for sustainable food colourant production: Innovations and opportunities. Food Chemistry, 503 147749, 1-16. doi: 10.1016/j.foodchem.2025.147749

Synthetic biology for sustainable food colourant production: Innovations and opportunities

2026

Journal Article

Programmable cell–cell adhesion in synthetic yeast communities for improved bioproduction

Chen, Haohong, Peng, Huadong, Ellis, Tom and Ledesma-Amaro, Rodrigo (2026). Programmable cell–cell adhesion in synthetic yeast communities for improved bioproduction. Nature Chemical Biology, 1-10. doi: 10.1038/s41589-025-02081-1

Programmable cell–cell adhesion in synthetic yeast communities for improved bioproduction

2025

Journal Article

Dual-pathway engineering enables robust vanillin bioproduction in Pseudomonas putida

Wen, Qifeng, Xu, Xiangwei, He, Qinghong, Wang, Caixia, Chen, Zheng, Zhong, Wei, Peng, Huadong, Yang, Maohua and Xing, Jianmin (2025). Dual-pathway engineering enables robust vanillin bioproduction in Pseudomonas putida. Chemical Engineering Journal, 526 171181, 171181-526. doi: 10.1016/j.cej.2025.171181

Dual-pathway engineering enables robust vanillin bioproduction in Pseudomonas putida

2025

Journal Article

Design and synthesis of fluorosurfactants for microfluidic droplet-based bioapplications

Li, Xiangke, Zhang, Cheng, Peng, Huadong, Ma, Shaohua, Davis, Thomas P. and Qiao, Ruirui (2025). Design and synthesis of fluorosurfactants for microfluidic droplet-based bioapplications. Polymer Science & Technology polymscitech.5c00092. doi: 10.1021/polymscitech.5c00092

Design and synthesis of fluorosurfactants for microfluidic droplet-based bioapplications

2025

Journal Article

Insights into the methanol utilization capacity of Y. lipolytica and improvements through metabolic engineering

Jiang, Wei, Newell, William, Liu, Jingjing, Coppens, Lucas, Slater, Khushboo Borah, Peng, Huadong, Bell, David, Liu, Long, Haritos, Victoria and Ledesma-Amaro, Rodrigo (2025). Insights into the methanol utilization capacity of Y. lipolytica and improvements through metabolic engineering. Metabolic Engineering, 91, 30-43. doi: 10.1016/j.ymben.2025.03.014

Insights into the methanol utilization capacity of Y. lipolytica and improvements through metabolic engineering

2025

Journal Article

Corrigendum to “Insights into the methanol utilization capacity of Y. lipolytica and improvements through metabolic engineering” [Metabol. Eng. (2025) 91 30–43]

Jiang, Wei, Newell, William, Liu, Jingjing, Coppens, Lucas, Slater, Khushboo Borah, Peng, Huadong, Bell, David, Liu, Long, Haritos, Victoria and Ledesma-Amaro, Rodrigo (2025). Corrigendum to “Insights into the methanol utilization capacity of Y. lipolytica and improvements through metabolic engineering” [Metabol. Eng. (2025) 91 30–43]. Metabolic Engineering, 91, 170-170. doi: 10.1016/j.ymben.2025.04.004

Corrigendum to “Insights into the methanol utilization capacity of Y. lipolytica and improvements through metabolic engineering” [Metabol. Eng. (2025) 91 30–43]

2025

Journal Article

Advancements and challenges in the bioproduction of raspberry ketone by precision fermentation

Gao, Peizhen, Sun, Hanzhi, Ledesma-Amaro, Rodrigo, Marcellin, Esteban and Peng, Huadong (2025). Advancements and challenges in the bioproduction of raspberry ketone by precision fermentation. Future Foods, 11 100606, 1-10. doi: 10.1016/j.fufo.2025.100606

Advancements and challenges in the bioproduction of raspberry ketone by precision fermentation

2025

Journal Article

Advancing Australia’s food future: opportunities and challenges in precision fermentation

Gumulya, Yosephine, Peng, Huadong, Ebert, Birgitta, Johnson, Hope, van der Pols, Jolieke C., Bansal, Nidhi, Marcellin, Esteban and Turner, Mark S. (2025). Advancing Australia’s food future: opportunities and challenges in precision fermentation. Future Foods, 11 100630, 100630. doi: 10.1016/j.fufo.2025.100630

Advancing Australia’s food future: opportunities and challenges in precision fermentation

2025

Journal Article

Recycling CO2 into bioingredients: towards synthetic photo/litho-mixotrophy

Peng, Bingyin, Peng, Huadong and Speight, Robert E. (2025). Recycling CO2 into bioingredients: towards synthetic photo/litho-mixotrophy. Trends in Biotechnology. doi: 10.1016/j.tibtech.2025.10.013

Recycling CO2 into bioingredients: towards synthetic photo/litho-mixotrophy

2024

Journal Article

Engineered cross-feeding creates inter- and intra-species synthetic yeast communities with enhanced bioproduction

Park, Young-Kyoung, Peng, Huadong, Hapeta, Piotr, Sellés Vidal, Lara and Ledesma-Amaro, Rodrigo (2024). Engineered cross-feeding creates inter- and intra-species synthetic yeast communities with enhanced bioproduction. Nature Communications, 15 (1) 8924, 1-10. doi: 10.1038/s41467-024-53117-4

Engineered cross-feeding creates inter- and intra-species synthetic yeast communities with enhanced bioproduction

2024

Journal Article

High‐throughput G protein‐coupled receptor‐based autocrine screening for secondary metabolite production in yeast

Saleski, Tatyana E., Peng, Huadong, Lengger, Bettina, Wang, Jinglin, Jensen, Michael Krogh and Jensen, Emil D. (2024). High‐throughput G protein‐coupled receptor‐based autocrine screening for secondary metabolite production in yeast. Biotechnology and Bioengineering, 121 (10), 3283-3296. doi: 10.1002/bit.28797

High‐throughput G protein‐coupled receptor‐based autocrine screening for secondary metabolite production in yeast

2024

Journal Article

Metabolic engineering of Corynebacterium glutamicum for the high-level production of l-Valine under aerobic conditions

Wang, Feiao, Cai, Ningyun, Leng, Yanlin, Wu, Chen, Wang, Yanan, Tian, Siyu, Zhang, Chenglin, Xu, Qingyang, Peng, Huadong, Chen, Ning and Li, Yanjun (2024). Metabolic engineering of Corynebacterium glutamicum for the high-level production of l-Valine under aerobic conditions. ACS Synthetic Biology, 13 (9), 2861-2872. doi: 10.1021/acssynbio.4c00278

Metabolic engineering of Corynebacterium glutamicum for the high-level production of l-Valine under aerobic conditions

2024

Journal Article

DELLA proteins recruit the Mediator complex subunit MED15 to coactivate transcription in land plants

Hernández-García, Jorge, Serrano-Mislata, Antonio, Lozano-Quiles, María, Úrbez, Cristina, Nohales, María A, Blanco-Touriñán, Noel, Peng, Huadong, Ledesma-Amaro, Rodrigo and Blázquez, Miguel A. (2024). DELLA proteins recruit the Mediator complex subunit MED15 to coactivate transcription in land plants. Proceedings of the National Academy of Sciences of the United States of America, 121 (19) e2319163121. doi: 10.1073/pnas.2319163121

DELLA proteins recruit the Mediator complex subunit MED15 to coactivate transcription in land plants

2024

Journal Article

Yeast platforms for production and screening of bioactive derivatives of rauwolscine

Bradley, Samuel A., Hansson, Frederik G., Lehka, Beata J., Rago, Daniela, Pinho, Pedro, Peng, Huadong, Adhikari, Khem B., Haidar, Ahmad K., Hansen, Lea G., Volkova, Daria, Holtz, Maxence, Muyo Abad, Sergi, Ma, Xin, Koudounas, Konstantinos, Besseau, Sébastien, Gautron, Nicolas, Mélin, Céline, Marc, Jillian, Birer Williams, Caroline, Courdavault, Vincent, Jensen, Emil D., Keasling, Jay D., Zhang, Jie and Jensen, Michael K. (2024). Yeast platforms for production and screening of bioactive derivatives of rauwolscine. ACS Synthetic Biology, 13 (5), 1498-1512. doi: 10.1021/acssynbio.4c00039

Yeast platforms for production and screening of bioactive derivatives of rauwolscine

2024

Journal Article

Exploring engineering strategies that enhance de novo production of exotic cyclopropane fatty acids in Saccharomyces cerevisiae

Jiang, Wei, Peng, Huadong, He, Lizhong, Lesma‐Amaro, Rodrigo and Haritos, Victoria S. (2024). Exploring engineering strategies that enhance de novo production of exotic cyclopropane fatty acids in Saccharomyces cerevisiae. Biotechnology Journal, 19 (2) 2300694, 1-10. doi: 10.1002/biot.202300694

Exploring engineering strategies that enhance de novo production of exotic cyclopropane fatty acids in Saccharomyces cerevisiae

2023

Journal Article

Valorisation of Biomass Waste for Sustainable Bioenergy and Biofuel Production

Sun, Pei-Ti and Peng, Huadong (2023). Valorisation of Biomass Waste for Sustainable Bioenergy and Biofuel Production. Bioengineering, 10 (5) 619, 1-4. doi: 10.3390/bioengineering10050619

Valorisation of Biomass Waste for Sustainable Bioenergy and Biofuel Production

2023

Journal Article

Enhanced production of d-pantothenic acid in Corynebacterium glutamicum using an efficient CRISPR-Cpf1 genome editing method

Su, Rui, Wang, Ting, Bo, Taidong, Cai, Ningyun, Yuan, Meng, Wu, Chen, Jiang, Hao, Peng, Huadong, Chen, Ning and Li, Yanjun (2023). Enhanced production of d-pantothenic acid in Corynebacterium glutamicum using an efficient CRISPR-Cpf1 genome editing method. Microbial Cell Factories, 22 (1) 3, 1-15. doi: 10.1186/s12934-023-02017-1

Enhanced production of d-pantothenic acid in Corynebacterium glutamicum using an efficient CRISPR-Cpf1 genome editing method