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2025

Journal Article

Plug-and-Play automated behavioral tracking of zebrafish larvae with DeepLabCut and SLEAP: pre-trained networks and datasets of annotated poses

Scholz, Leandro A., Mancienne, Tessa, Stednitz, Sarah J., Scott, Ethan K. and Lee, Conrad C. Y. (2025). Plug-and-Play automated behavioral tracking of zebrafish larvae with DeepLabCut and SLEAP: pre-trained networks and datasets of annotated poses. doi: 10.1101/2025.06.04.657938

Plug-and-Play automated behavioral tracking of zebrafish larvae with DeepLabCut and SLEAP: pre-trained networks and datasets of annotated poses

2025

Journal Article

Brain-wide impacts of sedation on spontaneous activity and auditory processing in larval zebrafish

Favre-Bulle, Itia A., Muller, Eli, Lee, Conrad, Scholz, Leandro A., Arnold, Joshua, Munn, Brandon, Wainstein, Gabriel, Shine, James M. and Scott, Ethan K. (2025). Brain-wide impacts of sedation on spontaneous activity and auditory processing in larval zebrafish. The Journal of Neuroscience, 45 (15) e0204242025. doi: 10.1523/jneurosci.0204-24.2025

Brain-wide impacts of sedation on spontaneous activity and auditory processing in larval zebrafish

2021

Journal Article

Broad frequency sensitivity and complex neural coding in the larval zebrafish auditory system

Poulsen, Rebecca E., Scholz, Leandro A., Constantin, Lena, Favre-Bulle, Itia, Vanwalleghem, Gilles C. and Scott, Ethan K. (2021). Broad frequency sensitivity and complex neural coding in the larval zebrafish auditory system. Current Biology, 31 (9), 1-11. doi: 10.1016/j.cub.2021.01.103

Broad frequency sensitivity and complex neural coding in the larval zebrafish auditory system

2021

Journal Article

Estimation of heat and mass transfer coefficients in a pilot packed-bed solid-state fermentation bioreactor

Finkler, Anelize Terezinha Jung, Weber, Mariana Zanlorenzi, Fuchs, Gustavo Alexandre, Scholz, Leandro Aluisio, de Lima Luz Jr, Luiz Fernando, Krieger, Nadia, Mitchell, David Alexander and Jorge, Luiz Mário de Matos (2021). Estimation of heat and mass transfer coefficients in a pilot packed-bed solid-state fermentation bioreactor. Chemical Engineering Journal, 408 127246, 1-9. doi: 10.1016/j.cej.2020.127246

Estimation of heat and mass transfer coefficients in a pilot packed-bed solid-state fermentation bioreactor

2020

Journal Article

Altered brain-wide auditory networks in a zebrafish model of fragile X syndrome

Constantin, Lena, Poulsen, Rebecca E., Scholz, Leandro A., Favre-Bulle, Itia A., Taylor, Michael A., Sun, Biao, Goodhill, Geoffrey J., Vanwalleghem, Gilles C. and Scott, Ethan K. (2020). Altered brain-wide auditory networks in a zebrafish model of fragile X syndrome. BMC Biology, 18 (1) 125, 125. doi: 10.1186/s12915-020-00857-6

Altered brain-wide auditory networks in a zebrafish model of fragile X syndrome

2020

Journal Article

BIAFLOWS: A collaborative framework to reproducibly deploy and benchmark bioimage analysis workflows

Rubens, Ulysse, Mormont, Romain, Paavolainen, Lassi, Bäcker, Volker, Pavie, Benjamin, Scholz, Leandro A., Michiels, Gino, Maška, Martin, Ünay, Devrim, Ball, Graeme, Hoyoux, Renaud, Vandaele, Rémy, Golani, Ofra, Stanciu, Stefan G., Sladoje, Natasa, Paul-Gilloteaux, Perrine, Marée, Raphaël and Tosi, Sébastien (2020). BIAFLOWS: A collaborative framework to reproducibly deploy and benchmark bioimage analysis workflows. Patterns, 1 (3) 100040, 1-9. doi: 10.1016/j.patter.2020.100040

BIAFLOWS: A collaborative framework to reproducibly deploy and benchmark bioimage analysis workflows