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2025 Journal Article Impact of temperature on butyric and caproic acid production in lactic acid chain elongationSabbe, Kevin, Boon, Nico and Ganigue, Ramon (2025). Impact of temperature on butyric and caproic acid production in lactic acid chain elongation. Journal of Environmental Chemical Engineering, 13 (5) 119152, 1-13. doi: 10.1016/j.jece.2025.119152 |
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2025 Journal Article Granulation of a planktonic thermophilic anammox culture enables high rate nitrogen removal from warm nitrogen rich wastewater: A proof of conceptRavikumar, Badri Narayan, Jia, Mingsheng, Geleyn, Charlotte, De Beer, Thomas, Carvajal-Arroyo, Jose M. and Ganigue, Ramon (2025). Granulation of a planktonic thermophilic anammox culture enables high rate nitrogen removal from warm nitrogen rich wastewater: A proof of concept. Chemical Engineering Journal, 519 165529, 1-15. doi: 10.1016/j.cej.2025.165529 |
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2025 Journal Article Large-sized aerobic granular biofilm: stable biotechnology to improve nitrogen removal and reduce sludge yieldMa, Haibo, Chen, Sihao, Lv, Linhuan, Ye, Zhou, Yang, Jiaqi, Wang, Binbin, Zou, Jinte, Li, Jun and Ganigue, Ramon (2025). Large-sized aerobic granular biofilm: stable biotechnology to improve nitrogen removal and reduce sludge yield. Bioresource Technology, 429 132543, 1-10. doi: 10.1016/j.biortech.2025.132543 |
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2025 Journal Article Characterization of solvents and extractants for selective recovery of n-caproic acidFernandez-Blancoa, Carla, Sabbeb, Kevin, Veigaa, Maria C., Kennesa, Christian and Ganigue, Ramon (2025). Characterization of solvents and extractants for selective recovery of n-caproic acid. Separation and Purification Technology, 361 131411, 1-9. doi: 10.1016/j.seppur.2025.131411 |
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2025 Journal Article Implementation of a Clostridium luticellarii genome-scale model for upgrading syngas fermentationsScott, William T., Rockx, Siemen, Marien, Quinten, Regueira, Alberte, Candry, Pieter, Ganigue, Ramon, Koehorst, Jasper J. and Schaap, Peter J. (2025). Implementation of a Clostridium luticellarii genome-scale model for upgrading syngas fermentations. Computational and Structural Biotechnology Journal, 27, 649-660. doi: 10.1016/j.csbj.2025.01.013 |
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2024 Journal Article Editorial: Microbial biorefineries for a more sustainable, circular economySakarika, Myrsini, Matassa, Silvio, Carvajal-Arroyo, Jose M. and Ganigue, Ramon (2024). Editorial: Microbial biorefineries for a more sustainable, circular economy. Frontiers in Bioengineering and Biotechnology, 12 1512756. doi: 10.3389/fbioe.2024.1512756 |
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2024 Journal Article Isobutyric and n-butyric acid production from H2 and CO2 by Clostridium luticellarii in a hollow fiber membrane biofilm reactor: Reactor operation and process modellingMarien, Quinten, Flores-Alsina, Xavier, Aslam, Umair, Gernaey, Krist V., Regueira, Alberte and Ganigue, Ramon (2024). Isobutyric and n-butyric acid production from H2 and CO2 by Clostridium luticellarii in a hollow fiber membrane biofilm reactor: Reactor operation and process modelling. Chemical Engineering Journal, 495 153216, 1-13. doi: 10.1016/j.cej.2024.153216 |
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2024 Journal Article Comprehensive comparative study on n-caproate production by Clostridium kluyveri: batch vs. continuous operation modesFernandez-Blanco, Carla, Pereira, Alexandra, Veiga, Maria C., Kennes, Christian and Ganigue, Ramon (2024). Comprehensive comparative study on n-caproate production by Clostridium kluyveri: batch vs. continuous operation modes. Bioresource Technology, 408 131138, 1-9. doi: 10.1016/j.biortech.2024.131138 |
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2024 Journal Article Editorial: Microbial chain elongation-carbon recovering biorefineries for the circular economyStrik, David P. B. T. B. and Ganigue, Ramon (2024). Editorial: Microbial chain elongation-carbon recovering biorefineries for the circular economy. Frontiers in Bioengineering and Biotechnology, 12 1448975. doi: 10.3389/fbioe.2024.1448975 |
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2024 Journal Article Conditions for successful nitrogen removal from source-separated urine by partial nitritation/anammoxFaust, Valentin, Markus, Philipp, Schielke-Jenni, Sarina, Timmer, Marijn J., De Paepe, Jolien, Ganigue, Ramon, Vlaeminck, Siegfried E. and Udert, Kai M. (2024). Conditions for successful nitrogen removal from source-separated urine by partial nitritation/anammox. PLoS Water, 3 (5) e0000235, 1-23. doi: 10.1371/journal.pwat.0000235 |
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2024 Journal Article Resource-efficient nitrogen removal from source-separated urine with partial nitritation/anammox in a membrane-aerated biofilm reactorTimmer, Marijn J., De Paepe, Jolien, Van Winckel, Tim, Spiller, Marc, Spacova, Irina, De Paepe, Kim, Pintelon, Isabel, Lebeer, Sarah, De Vos, Winnok H., Lasseur, Christophe, Ganigue, Ramon, Udert, Kai M. and Vlaeminck, Siegfried E. (2024). Resource-efficient nitrogen removal from source-separated urine with partial nitritation/anammox in a membrane-aerated biofilm reactor. ACS ES&T Engineering, 4 (7), 1609-1621. doi: 10.1021/acsestengg.4c00058 |
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2024 Journal Article Radiotolerance of N-cycle bacteria and their transcriptomic response to low-dose space-analogue ionizing irradiationVerbeelen, Tom, Fernandez, Celia Alvarez, Nguyen, Thanh Huy, Gupta, Surya, Leroy, Baptiste, Wattiez, Ruddy, Vlaeminck, Siegfried E., Leys, Natalie, Ganigue, Ramon and Mastroleo, Felice (2024). Radiotolerance of N-cycle bacteria and their transcriptomic response to low-dose space-analogue ionizing irradiation. iScience, 27 (5) 109596, 1-20. doi: 10.1016/j.isci.2024.109596 |
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2024 Journal Article Why do lactic acid bacteria thrive in chain elongation microbiomes?Ulcar, Barbara, Regueira, Alberte, Podojstersek, Maja, Boon, Nico and Ganigue, Ramon (2024). Why do lactic acid bacteria thrive in chain elongation microbiomes?. Frontiers in Bioengineering and Biotechnology, 11 1291007, 1-17. doi: 10.3389/fbioe.2023.1291007 |
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2024 Journal Article Whole transcriptome analysis highlights nutrient limitation of nitrogen cycle bacteria in simulated microgravityVerbeelen, Tom, Fernandez, Celia Alvarez, Nguyen, Thanh Huy, Gupta, Surya, Aarts, Raf, Tabury, Kevin, Leroy, Baptiste, Wattiez, Ruddy, Vlaeminck, Siegfried E., Leys, Natalie, Ganigue, Ramon and Mastroleo, Felice (2024). Whole transcriptome analysis highlights nutrient limitation of nitrogen cycle bacteria in simulated microgravity. npj Microgravity, 10 (1) 3, 1-19. doi: 10.1038/s41526-024-00345-z |
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2024 Journal Article Steerable isobutyric and butyric acid production from CO2 and H2 by Clostridium luticellariiMarien, Quinten, Regueira, Alberte and Ganigue, Ramon (2024). Steerable isobutyric and butyric acid production from CO2 and H2 by Clostridium luticellarii. Microbial Biotechnology, 17 (1) e14321, 1-16. doi: 10.1111/1751-7915.14321 |
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2023 Journal Article Influence of pH on urine nitrification: Community shifts of ammonia-oxidizing bacteria and inhibition of nitrite-oxidizing bacteriaFaust, Valentin, Vlaeminck, Siegfried E., Ganigue, Ramon and Udert, Kai M. (2023). Influence of pH on urine nitrification: Community shifts of ammonia-oxidizing bacteria and inhibition of nitrite-oxidizing bacteria. ACS ES&T Engineering, 4 (2), 342-353. doi: 10.1021/acsestengg.3c00320 |
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2023 Journal Article Trophic interactions shape the spatial organization of medium-chain carboxylic acid producing granular biofilm communitiesCandry, Pieter, Chadwick, Grayson L., Caravajal-Arroyo, Jose Maria, Lacoere, Tim, Winkler, Mari-Karoliina Henriikka, Ganigue, Ramon, Orphan, Victoria J. and Rabaey, Korneel (2023). Trophic interactions shape the spatial organization of medium-chain carboxylic acid producing granular biofilm communities. ISME Journa, 17 (11), 2014-2022. doi: 10.1038/s41396-023-01508-8 |
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2023 Journal Article Optimizing control strategies for urine nitrification: narrow pH control band enhances process stability and reduces nitrous oxide emissionsFaust, Valentin, Boon, Nico, Ganigue, Ramon, Vlaeminck, Siegfried E. and Udert, Kai M. (2023). Optimizing control strategies for urine nitrification: narrow pH control band enhances process stability and reduces nitrous oxide emissions. Frontiers in Environmental Science, 11 1275152, 1-14. doi: 10.3389/fenvs.2023.1275152 |
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2023 Journal Article RNA extraction protocol from low-biomass bacterial Nitrosomonas europaea and Nitrobacter winogradskyi cultures for whole transcriptome studiesVerbeelen, Tom, Van Houdt, Rob, Leys, Natalie, Ganigue, Ramon and Mastroleo, Felice (2023). RNA extraction protocol from low-biomass bacterial Nitrosomonas europaea and Nitrobacter winogradskyi cultures for whole transcriptome studies. STAR Protocols, 4 (3) 102358, 1-9. doi: 10.1016/j.xpro.2023.102358 |
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2023 Journal Article Predicting the performance of chain elongating microbiomes through flow cytometric fingerprintingSabbe, Kevin, D'Haen, Liese, Boon, Nico and Ganigu, Ramon (2023). Predicting the performance of chain elongating microbiomes through flow cytometric fingerprinting. Water Research, 243 120323, 1-11. doi: 10.1016/j.watres.2023.120323 |
