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2024 Journal Article Radiotolerance of N-cycle bacteria and their transcriptomic response to low-dose space-analogue ionizing irradiationVerbeelen, Tom, Fernandez, Celia Alvarez, Nguyen, Thanh Huy, Gupta, Surya, Leroy, Baptiste, Wattiez, Ruddy, Vlaeminck, Siegfried E., Leys, Natalie, Ganigue, Ramon and Mastroleo, Felice (2024). Radiotolerance of N-cycle bacteria and their transcriptomic response to low-dose space-analogue ionizing irradiation. iScience, 27 (5) 109596, 1-20. doi: 10.1016/j.isci.2024.109596 |
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2024 Journal Article Why do lactic acid bacteria thrive in chain elongation microbiomes?Ulcar, Barbara, Regueira, Alberte, Podojstersek, Maja, Boon, Nico and Ganigue, Ramon (2024). Why do lactic acid bacteria thrive in chain elongation microbiomes?. Frontiers in Bioengineering and Biotechnology, 11 1291007, 1-17. doi: 10.3389/fbioe.2023.1291007 |
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2024 Journal Article Whole transcriptome analysis highlights nutrient limitation of nitrogen cycle bacteria in simulated microgravityVerbeelen, Tom, Fernandez, Celia Alvarez, Nguyen, Thanh Huy, Gupta, Surya, Aarts, Raf, Tabury, Kevin, Leroy, Baptiste, Wattiez, Ruddy, Vlaeminck, Siegfried E., Leys, Natalie, Ganigue, Ramon and Mastroleo, Felice (2024). Whole transcriptome analysis highlights nutrient limitation of nitrogen cycle bacteria in simulated microgravity. npj Microgravity, 10 (1) 3, 1-19. doi: 10.1038/s41526-024-00345-z |
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2024 Journal Article Steerable isobutyric and butyric acid production from CO2 and H2 by Clostridium luticellariiMarien, Quinten, Regueira, Alberte and Ganigue, Ramon (2024). Steerable isobutyric and butyric acid production from CO2 and H2 by Clostridium luticellarii. Microbial Biotechnology, 17 (1) e14321, 1-16. doi: 10.1111/1751-7915.14321 |
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2023 Journal Article Influence of pH on urine nitrification: Community shifts of ammonia-oxidizing bacteria and inhibition of nitrite-oxidizing bacteriaFaust, Valentin, Vlaeminck, Siegfried E., Ganigue, Ramon and Udert, Kai M. (2023). Influence of pH on urine nitrification: Community shifts of ammonia-oxidizing bacteria and inhibition of nitrite-oxidizing bacteria. ACS ES&T Engineering, 4 (2), 342-353. doi: 10.1021/acsestengg.3c00320 |
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2023 Journal Article Trophic interactions shape the spatial organization of medium-chain carboxylic acid producing granular biofilm communitiesCandry, Pieter, Chadwick, Grayson L., Caravajal-Arroyo, Jose Maria, Lacoere, Tim, Winkler, Mari-Karoliina Henriikka, Ganigue, Ramon, Orphan, Victoria J. and Rabaey, Korneel (2023). Trophic interactions shape the spatial organization of medium-chain carboxylic acid producing granular biofilm communities. ISME Journa, 17 (11), 2014-2022. doi: 10.1038/s41396-023-01508-8 |
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2023 Journal Article Optimizing control strategies for urine nitrification: narrow pH control band enhances process stability and reduces nitrous oxide emissionsFaust, Valentin, Boon, Nico, Ganigue, Ramon, Vlaeminck, Siegfried E. and Udert, Kai M. (2023). Optimizing control strategies for urine nitrification: narrow pH control band enhances process stability and reduces nitrous oxide emissions. Frontiers in Environmental Science, 11 1275152, 1-14. doi: 10.3389/fenvs.2023.1275152 |
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2023 Journal Article RNA extraction protocol from low-biomass bacterial Nitrosomonas europaea and Nitrobacter winogradskyi cultures for whole transcriptome studiesVerbeelen, Tom, Van Houdt, Rob, Leys, Natalie, Ganigue, Ramon and Mastroleo, Felice (2023). RNA extraction protocol from low-biomass bacterial Nitrosomonas europaea and Nitrobacter winogradskyi cultures for whole transcriptome studies. STAR Protocols, 4 (3) 102358, 1-9. doi: 10.1016/j.xpro.2023.102358 |
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2023 Journal Article Predicting the performance of chain elongating microbiomes through flow cytometric fingerprintingSabbe, Kevin, D'Haen, Liese, Boon, Nico and Ganigu, Ramon (2023). Predicting the performance of chain elongating microbiomes through flow cytometric fingerprinting. Water Research, 243 120323, 1-11. doi: 10.1016/j.watres.2023.120323 |
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2023 Journal Article Plant and microbial science and technology as cornerstones to Bioregenerative Life Support Systems in spaceDe Micco, Veronica, Amitrano, Chiara, Mastroleo, Felice, Aronne, Giovanna, Battistelli, Alberto, Carnero-Diaz, Eugenie, De Pascale, Stefania, Detrell, Gisela, Dussap, Claude-Gilles, Ganigue, Ramon, Jakobsen, Oyvind Mejdell, Poulet, Lucie, Van Houdt, Rob, Verseux, Cyprien, Vlaeminck, Siegfried E., Willaert, Ronnie and Leys, Natalie (2023). Plant and microbial science and technology as cornerstones to Bioregenerative Life Support Systems in space. npj Microgravity, 9 (1) 69, 1-12. doi: 10.1038/s41526-023-00317-9 |
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2023 Journal Article Methylotrophs: from C1 compounds to food (vol 75, 102685,2022)Sakarika, Myrsini, Ganigue, Ramon and Rabaey, Korneel (2023). Methylotrophs: from C1 compounds to food (vol 75, 102685,2022). Current Opinion in Biotechnology, 82 102964. doi: 10.1016/j.copbio.2023.102964 |
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2023 Journal Article Production of calcium carbonate-precipitating biomass powder as self-healing additive in concrete and performance evaluation in mortarZhu, Xuejiao, Sakarika, Myrsini, Ganigue, Ramon, Van Tittelboom, Kim, Ersan, Yusuf Cagatay, Boon, Nico and De Belie, Nele (2023). Production of calcium carbonate-precipitating biomass powder as self-healing additive in concrete and performance evaluation in mortar. Cement and Concrete Composites, 138 104952, 1-16. doi: 10.1016/j.cemconcomp.2023.104952 |
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2023 Journal Article Understanding the role of polyurethane sponges on rapid formation of aerobic granular sludge and enhanced nitrogen removalZou, Jinte, Yang, Jiaqi, Yu, Fengfan, Cai, Lei, Li, Jun and Ganigue, Ramon (2023). Understanding the role of polyurethane sponges on rapid formation of aerobic granular sludge and enhanced nitrogen removal. Chemical Engineering Journal, 460 141670, 1-11. doi: 10.1016/j.cej.2023.141670 |
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2023 Journal Article Thermophilic caproic acid production from grass juice by sugar-based chain elongationSakarika, Myrsini, Regueira, Alberte, Rabaey, Korneel and Ganigue, Ramon (2023). Thermophilic caproic acid production from grass juice by sugar-based chain elongation. Science of the Total Environment, 860 160501, 1-11. doi: 10.1016/j.scitotenv.2022.160501 |
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2022 Journal Article Optimization of RNA extraction for bacterial whole transcriptome studies of low-biomass samplesVerbeelen, Tom, Houdt, Rob Van, Leys, Natalie, Ganigue, Ramon and Mastroleo, Felice (2022). Optimization of RNA extraction for bacterial whole transcriptome studies of low-biomass samples. Iscience, 25 (11) 105311, 105311. doi: 10.1016/j.isci.2022.105311 |
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2022 Journal Article Ammonia oxidation by novel<i> ?Candidatus</i> Nitrosacidococcus urinae? is sensitive to process disturbances at low pH and to iron limitation at neutral pHFaust, Valentin, van Alen, Theo A., Op den Camp, Huub J. M., Vlaeminck, Siegfried E., Ganigue, Ramon, Boon, Nico and Udert, Kai M. (2022). Ammonia oxidation by novel ?Candidatus Nitrosacidococcus urinae? is sensitive to process disturbances at low pH and to iron limitation at neutral pH. Water Research X, 17 100157, 100157. doi: 10.1016/j.wroa.2022.100157 |
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2022 Journal Article Nitrous Oxide Emissions and Carbon Footprint of Decentralized Urine Fertilizer Production by Nitrification and DistillationFaust, Valentin, Gruber, Wenzel, Ganigue, Ramon, Vlaeminck, Siegfried E. and Udert, Kai M. (2022). Nitrous Oxide Emissions and Carbon Footprint of Decentralized Urine Fertilizer Production by Nitrification and Distillation. Acs Es&T Engineering, 2 (9), 1745-1755. doi: 10.1021/acsestengg.2c00082 |
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2022 Journal Article Editorial: Microbial Chain Elongation-Close the Carbon Loop by Connecting-CommunitiesStrik, David P. B. T. B., Ganigue, Ramon and Angenent, Largus T. (2022). Editorial: Microbial Chain Elongation-Close the Carbon Loop by Connecting-Communities. Frontiers in Bioengineering and Biotechnology, 10 894490. doi: 10.3389/fbioe.2022.894490 |
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2022 Journal Article High-rate conversion of lactic acid-rich streams to caproic acid in a fermentative granular systemMarien, Quinten, Ulcar, Barbara, Verleyen, Jesper, Vanthuyne, Benjamin and Ganigue, Ramon (2022). High-rate conversion of lactic acid-rich streams to caproic acid in a fermentative granular system. Bioresource Technology, 355 127250. doi: 10.1016/j.biortech.2022.127250 |
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2022 Journal Article Substrate loading and nutrient composition steer caproic acid production and biofilm aggregation in high-rate granular reactorsMarien, Quinten, Candry, Pieter, Hendriks, Eline, Carvajal-Arroyo, Jose Maria and Ganigue, Ramon (2022). Substrate loading and nutrient composition steer caproic acid production and biofilm aggregation in high-rate granular reactors. Journal of Environmental Chemical Engineering, 10 (3) 107727. doi: 10.1016/j.jece.2022.107727 |
