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2015 Journal Article Deep sequence characterisation of a divergent HPIV-4a from an adult with prolonged influenza-like illnessArden, Katherine E., Beatson, Scott A., Lambert, Stephen B., Wang, Claire W. T., McVernon, Jodie, Nissen, Michael D., Nolan, Terry, Sloots, Theo P. and Mackay, Ian M. (2015). Deep sequence characterisation of a divergent HPIV-4a from an adult with prolonged influenza-like illness. Virology Reports, 5, 19-28. doi: 10.1016/j.virep.2015.02.001 |
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2015 Journal Article Third-generation cephalosporin resistance conferred by a chromosomally encoded blaCMY-23 gene in the Escherichia coli ST131 reference strain EC958Phan, Minh-Duy, Peters, Kate M., Sarkar, Sohinee, Forde, Brian M., Lo, Alvin W., Stanton-Cook, Mitchell, Roberts, Leah W., Upton, Mathew, Beatson, Scott A. and Schembri, Mark A. (2015). Third-generation cephalosporin resistance conferred by a chromosomally encoded blaCMY-23 gene in the Escherichia coli ST131 reference strain EC958. Journal of Antimicrobial Chemotherapy, 70 (7) dkv066, 1969-1972. doi: 10.1093/jac/dkv066 |
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2015 Other Outputs Microbial Genomics Raw Sequence and Analysis DataBeatson, Scott A. and Stanton-Cook, Mitchell (2015). Microbial Genomics Raw Sequence and Analysis Data. The University of Queensland. (Collection) doi: 10.14264/uql.2017.106 |
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2015 Journal Article The co-transcriptome of uropathogenic Escherichia coli-infected mouse macrophages reveals new insights into host–pathogen interactionsMavromatis, Charalampos (Harris), Bokil, Nilesh J., Totsika, Makrina, Kakkanat, Asha, Schaale, Kolja, Cannistraci, Carlo V., Ryu, Taewoo, Beatson, Scott A., Ulett, Glen C., Schembri, Mark A., Sweet, Matthew J. and Ravasi, Timothy (2015). The co-transcriptome of uropathogenic Escherichia coli-infected mouse macrophages reveals new insights into host–pathogen interactions. Cellular Microbiology, 17 (5), 730-746. doi: 10.1111/cmi.12397 |
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2014 Journal Article The host metabolite D-serine contributes to bacterial niche specificity through gene selection.Connolly, James P., Goldstone, Robert J., Burgess, Karl, Cogdell, Richard J., Beatson, Scott A., Vollmer, Waldemar, Smith, David G. E. and Roe, Andrew J. (2014). The host metabolite D-serine contributes to bacterial niche specificity through gene selection.. The ISME Journal, 9 (4), 1039-1051. doi: 10.1038/ismej.2014.242 |
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2014 Journal Article Mutual exclusivity of hyaluronan and hyaluronidase in invasive group a StreptococcusHenningham, Anna, Yamaguchi, Masaya, Aziz, Ramy K., Kuipers, Kirsten, Buffalo,Cosmo Z., Dahesh, Samira, Choudhury, Biswa, Van Vleet, Jeremy, Yamaguchi, Yuka, Seymour, Lisa M., Ben Zakour, Nouri L., He, Lingjun, Smith, Helen V., Grimwood, Keith, Beatson, Scott A., Ghosh, Partho, Walker, Mark J., Nizet, Victor and Cole, Jason N. (2014). Mutual exclusivity of hyaluronan and hyaluronidase in invasive group a Streptococcus. Journal of Biological Chemistry, 289 (46), 32303-32315. doi: 10.1074/jbc.M114.602847 |
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2014 Journal Article Corrigendum to "Exploiting the explosion of information associated with whole genome sequencing to tackle Shiga toxin-producing Escherichia coli (STEC) in global food production systems"Franz, Eelco, Delaquis, Pascal, Morabito, Stefano, Beutin, Lothar, Gobius, Kari, Rasko, David A., Jim, Bono, Nigel, French, Osek, Jacek, Lindstedt, Bjørn-Arne, Muniesa, Maite, Manning, Shannon, LeJeune, Jeff, Callaway, Todd, Beatson, Scott, Eppinger, Mark, Dallman, Tim, Forbes, Ken J., Aarts, Henk, Pearl, David L., Gannon, Victor P.J., Laing, Chad R. and Strachan, Norval J.C. (2014). Corrigendum to "Exploiting the explosion of information associated with whole genome sequencing to tackle Shiga toxin-producing Escherichia coli (STEC) in global food production systems". International Journal of Food Microbiology, 193, 159-159. doi: 10.1016/j.ijfoodmicro.2014.09.026 |
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2014 Journal Article Tracking antibiotic resistanceBeatson, Scott A. and Walker, Mark J. (2014). Tracking antibiotic resistance. Science, 345 (6203), 1454-1455. doi: 10.1126/science.1260471 |
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2014 Journal Article The intimin-like protein FdeC is regulated by H-NS and temperature in Enterohaemorrhagic Escherichia coliEaston, Donna M., Allsopp, Luke P., Phan, Minh-Duy, Gomes Moriel, Danilo, Goh, Guan Kai, Beatson, Scott A., Mahony, Timothy J., Cobbold, Rowland N. and Schembri, Mark A. (2014). The intimin-like protein FdeC is regulated by H-NS and temperature in Enterohaemorrhagic Escherichia coli. Applied and Environmental Microbiology, 80 (23), 7337-7347. doi: 10.1128/AEM.02114-14 |
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2014 Journal Article Exploiting the explosion of information associated with whole genome sequencing to tackle Shiga toxin-producing Escherichia coli (STEC) in global food production systemsFranz, Eelco, Delaquis, Pascal, Morabito, Stefano, Beutin, Lothar, Gobius, Kari, Rasko, David A., Bono, Jim, French, Nigel, Osek, Jacek, Lindstedt, Bjørn-Arne, Muniesa, Maite, Manning, Shannon, LeJeune, Jeff, Callaway, Todd, Beatson, Scott, Eppinger, Mark, Dallman, Tim, Forbes, Ken J., Aarts, Henk, Pearl, David L., Gannon, Victor P. J., Laing, Chad R. and Strachan, Norval J. C. (2014). Exploiting the explosion of information associated with whole genome sequencing to tackle Shiga toxin-producing Escherichia coli (STEC) in global food production systems. International Journal of Food Microbiology, 187, 57-72. doi: 10.1016/j.ijfoodmicro.2014.07.002 |
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2014 Journal Article The complete genome sequence of Escherichia coli EC958: a high quality reference sequence for the globally disseminated multidrug resistant E. coli O25b:H4-ST131 cloneForde, Brian M., Ben Zakour, Nouri L., Stanton-Cook, Mitchell, Phan, Minh-Duy, Totsika, Makrina, Peters, Kate M., Chan, Kok Gan, Schembri, Mark A., Upton, Mathew and Beatson, Scott A. (2014). The complete genome sequence of Escherichia coli EC958: a high quality reference sequence for the globally disseminated multidrug resistant E. coli O25b:H4-ST131 clone. PLoS One, 9 (8) e104400, e104400.1-e104400.13. doi: 10.1371/journal.pone.0104400 |
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2014 Journal Article The metabolic enzyme AdhE controls the virulence of Escherichia coli O157:H7Beckham, Katherine S. H., Connolly, James P. R., Ritchie, Jennifer M., Wang, Dai, Gawthorne, Jayde A., Tahoun, Amin, Gall, David L., Burgess, Karl, Burchmore, Richard J., Smith, Brian O., Beatson, Scott A., Byron, Olwyn, Wolfe, Alan J., Douce, Gillian R. and Roe, Andrew J. (2014). The metabolic enzyme AdhE controls the virulence of Escherichia coli O157:H7. Molecular Microbiology, 93 (1), 199-211. doi: 10.1111/mmi.12651 |
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2014 Journal Article Galleria mellonella Infection Model Demonstrates High Lethality of ST69 and ST127 Uropathogenic E. coli.Alghoribi, Majed F., Gibreel, Tarek M., Dodgson, Andrew R., Beatson, Scott A. and Upton, Mathew (2014). Galleria mellonella Infection Model Demonstrates High Lethality of ST69 and ST127 Uropathogenic E. coli.. PLoS One, 9 (7) e101547, e101547.1-e101547.10. doi: 10.1371/journal.pone.0101547 |
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2014 Journal Article Genome analysis and CRISPR typing of Salmonella enterica serovar VirchowBachmann, Nathan L., Petty, Nicola K., Ben Zakour, Nouri L., Szubert, Jan M., Savill, John and Beatson, Scott A. (2014). Genome analysis and CRISPR typing of Salmonella enterica serovar Virchow. BMC Genomics, 15 (1) 389, 389. doi: 10.1186/1471-2164-15-389 |
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2014 Journal Article Global dissemination of a multidrug resistant Escherichia coli clonePetty, Nicola K., Ben Zakour, Nouri L., Stanton-Cook, Mitchell, Skippington, Elizabeth, Totsika, Makrina, Forde, Brian M., Phan, Minh-Duy, Gomes Moriel, Danilo, Peters, Kate M., Davies, Mark, Rogers, Benjamin A., Dougan, Gordon, Rodriguez-Baño, Jesús, Pascual, Alvaro, Pitout, Johann D., Upton, Mathew, Paterson, David L., Walsh, Timothy R., Schembri, Mark A. and Beatson, Scott A. (2014). Global dissemination of a multidrug resistant Escherichia coli clone. Proceedings of the National Academy of Sciences, 111 (15), 5694-5699. doi: 10.1073/pnas.1322678111 |
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2014 Journal Article uPEPperoni: an online tool for upstream open reading frame location and analysis of transcript conservationSkarshewski, Adam, Stanton-Cook, Mitchell, Huber, Thomas, Al Mansoori, Sumaya, Smith, Ross, Beatson, Scott A. and Rothnagel, Joseph A. (2014). uPEPperoni: an online tool for upstream open reading frame location and analysis of transcript conservation. BMC Bioinformatics, 15 (36) 36, 1-6. doi: 10.1186/1471-2105-15-36 |
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2013 Journal Article A distinct and divergent lineage of genomic island-associated Type IV Secretion Systems in LegionellaWee, Bryan A., Woolfit, Megan, Beatson, Scott A. and Petty, Nicola K. (2013). A distinct and divergent lineage of genomic island-associated Type IV Secretion Systems in Legionella. PloS One, 8 (12) e82221, 1-13. doi: 10.1371/journal.pone.0082221 |
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2013 Journal Article Molecular analysis of the Acinetobacter baumannii biofilm-associated proteinGoh, H. M. Sharon, Beatson, Scott A., Totsika, Makrina, Moriel, Danilo G., Phan, Minh-Duy, Szubert, Jan, Runnegar, Naomi, Sidjabat, Hanna E., Paterson, David L., Nimmo, Graeme R., Lipman, Jeffrey and Schembri, Mark A. (2013). Molecular analysis of the Acinetobacter baumannii biofilm-associated protein. Applied and Environmental Microbiology, 79 (21), 6535-6543. doi: 10.1128/AEM.01402-13 |
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2013 Journal Article Identification of novel vaccine candidates against multidrug-resistant Acinetobacter baumanniiMoriel, Danilo G., Beatson, Scott A., Wurpel, Daniël J., Lipman, Jeffrey, Nimmo, Graeme R., Paterson, David L. and Schembri, Mark A. (2013). Identification of novel vaccine candidates against multidrug-resistant Acinetobacter baumannii. PLoS ONE, 8 (10) e77631, e77631.1-e77631.9. doi: 10.1371/journal.pone.0077631 |
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2013 Journal Article The serum resistome of a globally disseminated multidrug resistant uropathogenic Escherichia coli clonePhan, Minh-Duy, Peters, Kate M., Sarkar, Sohinee, Lukowski, Samuel W., Allsopp, Luke P., Moriel, Danilo Gomes, Achard, Maud E. S., Totsika, Makrina, Marshall, Vikki M., Upton, Mathew, Beatson, Scott A. and Schembri, Mark A. (2013). The serum resistome of a globally disseminated multidrug resistant uropathogenic Escherichia coli clone. PloS Genetics, 9 (10) e1003834, e1003834.1-e1003834.18. doi: 10.1371/journal.pgen.1003834 |
