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2021

Journal Article

Genotype specific P-spline response surfaces assist interpretation of regional wheat adaptation to climate change

Bustos-Korts, Daniela, Boer, Martin P., Chenu, Karine, Zheng, Bangyou, Chapman, Scott and van Eeuwijk, Fred (2021). Genotype specific P-spline response surfaces assist interpretation of regional wheat adaptation to climate change. In Silico Plants, 3 (2) diab018. doi: 10.1093/insilicoplants/diab018

Genotype specific P-spline response surfaces assist interpretation of regional wheat adaptation to climate change

2021

Journal Article

Coupling of machine learning methods to improve estimation of ground coverage from unmanned aerial vehicle (UAV) imagery for high-throughput phenotyping of crops

Hu, Pengcheng, Chapman, Scott C. and Zheng, Bangyou (2021). Coupling of machine learning methods to improve estimation of ground coverage from unmanned aerial vehicle (UAV) imagery for high-throughput phenotyping of crops. Functional Plant Biology, 48 (8), 766-779. doi: 10.1071/FP20309

Coupling of machine learning methods to improve estimation of ground coverage from unmanned aerial vehicle (UAV) imagery for high-throughput phenotyping of crops

2021

Journal Article

Scaling up high-throughput phenotyping for abiotic stress selection in the field

Smith, Daniel T., Potgieter, Andries B. and Chapman, Scott C. (2021). Scaling up high-throughput phenotyping for abiotic stress selection in the field. Theoretical and Applied Genetics, 134 (6), 1845-1866. doi: 10.1007/s00122-021-03864-5

Scaling up high-throughput phenotyping for abiotic stress selection in the field

2021

Journal Article

Evolution and application of digital technologies to predict crop type and crop phenology in agriculture

Potgieter, A. B., Zhao, Yan, Zarco-Tejada, Pablo J, Chenu, Karine, Zhang, Yifan, Porker, Kenton, Biddulph, Ben, Dang, Yash P., Neale, Tim, Roosta, Fred and Chapman, Scott (2021). Evolution and application of digital technologies to predict crop type and crop phenology in agriculture. In Silico Plants, 3 (1) diab017, 1-23. doi: 10.1093/insilicoplants/diab017

Evolution and application of digital technologies to predict crop type and crop phenology in agriculture

2021

Journal Article

An analysis of simulated yield data for pepper shows how genotype × environment interaction in yield can be understood in terms of yield components and their QTLs

Rodrigues, Paulo C., Heuvelink, Ep, Marcelis, Leo F. M., Chapman, Scott C. and van Eeuwijk, Fred A. (2021). An analysis of simulated yield data for pepper shows how genotype × environment interaction in yield can be understood in terms of yield components and their QTLs. Crop Science, 61 (3), 1826-1842. doi: 10.1002/csc2.20476

An analysis of simulated yield data for pepper shows how genotype × environment interaction in yield can be understood in terms of yield components and their QTLs

2021

Journal Article

UAV-Thermal imaging and agglomerative hierarchical clustering techniques to evaluate and rank physiological performance of wheat genotypes on sodic soil

Das, Sumanta, Christopher, Jack, Apan, Armando, Roy Choudhury, Malini, Chapman, Scott, Menzies, Neal W. and Dang, Yash P. (2021). UAV-Thermal imaging and agglomerative hierarchical clustering techniques to evaluate and rank physiological performance of wheat genotypes on sodic soil. ISPRS Journal of Photogrammetry and Remote Sensing, 173, 221-237. doi: 10.1016/j.isprsjprs.2021.01.014

UAV-Thermal imaging and agglomerative hierarchical clustering techniques to evaluate and rank physiological performance of wheat genotypes on sodic soil

2021

Journal Article

Limiting transpiration rate in high evaporative demand conditions to improve Australian wheat productivity

Collins, Brian, Chapman, Scott, Hammer, Graeme and Chenu, Karine (2021). Limiting transpiration rate in high evaporative demand conditions to improve Australian wheat productivity. in silico Plants, 3 (1) diab006, 1-16. doi: 10.1093/insilicoplants/diab006

Limiting transpiration rate in high evaporative demand conditions to improve Australian wheat productivity

2021

Journal Article

Integrating crop growth models with remote sensing for predicting biomass yield of sorghum

Yang, Kai-Wei, Chapman, Scott, Carpenter, Neal, Hammer, Graeme, McLean, Greg, Zheng, Bangyou, Chen, Yuhao, Delp, Edward, Masjedi, Ali, Crawford, Melba, Ebert, David, Habib, Ayman, Thompson, Addie, Weil, Clifford and Tuinstra, Mitchell R (2021). Integrating crop growth models with remote sensing for predicting biomass yield of sorghum. In Silico Plants, 3 (1) diab001, 1-19. doi: 10.1093/insilicoplants/diab001

Integrating crop growth models with remote sensing for predicting biomass yield of sorghum

2021

Conference Publication

Domain adaptation for plant organ detection with style transfer

James, Chrisbin, Gu, Yanyang, Chapman, Scott, Guo, Wei, David, Etienne, Madec, Simon, Potgieter, Andries and Eriksson, Anders (2021). Domain adaptation for plant organ detection with style transfer. International Conference on Digital Image Computing - Techniques and Applications (DICTA), Online, 29 November - 1 December 2021. Piscataway, NJ United States: Institute of Electrical and Electronics Engineers. doi: 10.1109/DICTA52665.2021.9647293

Domain adaptation for plant organ detection with style transfer

2021

Journal Article

Modelling selection response in plant breeding programs using crop models as mechanistic gene-to-phenotype (CGM-G2P) multi-trait link functions

Cooper, M., Powell, O., Voss-Fels, K. P., Messina, C. D., Gho, C., Podlich, D. W., Technow, F., Chapman, S. C., Beveridge, C. A., Ortiz-Barrientos, D. and Hammer, G. L. (2021). Modelling selection response in plant breeding programs using crop models as mechanistic gene-to-phenotype (CGM-G2P) multi-trait link functions. in silico Plants, 3 (1) diaa016, 1-21. doi: 10.1093/insilicoplants/diaa016

Modelling selection response in plant breeding programs using crop models as mechanistic gene-to-phenotype (CGM-G2P) multi-trait link functions

2020

Conference Publication

UAV-thermal imaging: A robust technology to evaluate in-field crop water stress and yield variation of wheat genotypes

Das, Sumanta, Christopher, Jack, Apan, Armando, Roy Choudhury, Malini, Chapman, Scott, Menzies, Neal W. and Dang, Yash P. (2020). UAV-thermal imaging: A robust technology to evaluate in-field crop water stress and yield variation of wheat genotypes. IEEE India Geoscience and Remote Sensing Symposium (InGARSS), Ahmedabad, India, 1-4 December 2020. Piscataway, NJ, United States: IEEE. doi: 10.1109/ingarss48198.2020.9358955

UAV-thermal imaging: A robust technology to evaluate in-field crop water stress and yield variation of wheat genotypes

2020

Journal Article

Global Wheat Head Detection (GWHD) dataset: a large and diverse dataset of high-resolution rgb-labelled images to develop and benchmark wheat head detection methods

David, E., Madec, Shouyang, Sadeghi-Tehran, Pouria, Aasen, Helge, Zheng, B., Liu, Simon, Kirchgessner, Norbert, Ishikawa, Goro, Nagasawa, Koichi, Badhon, Minhajul A., Pozniak, Curtis, de Solan, Benoit, Hund, Andreas, Chapman, Scott C., Baret, Fred, Stavness, Ian and Guo, Wei (2020). Global Wheat Head Detection (GWHD) dataset: a large and diverse dataset of high-resolution rgb-labelled images to develop and benchmark wheat head detection methods. Plant Phenomics, 2020 3521852, 1-12. doi: 10.34133/2020/3521852

Global Wheat Head Detection (GWHD) dataset: a large and diverse dataset of high-resolution rgb-labelled images to develop and benchmark wheat head detection methods

2020

Journal Article

Breeder friendly phenotyping

Reynolds, Matthew, Chapman, Scott, Crespo-Herrera, Leonardo, Molero, Gemma, Mondal, Suchismita, Pequeno, Diego N.L., Pinto, Francisco, Pinera-Chavez, Francisco J., Poland, Jesse, Rivera-Amado, Carolina, Saint Pierre, Carolina and Sukumaran, Sivakumar (2020). Breeder friendly phenotyping. Plant Science, 295 110396, 110396. doi: 10.1016/j.plantsci.2019.110396

Breeder friendly phenotyping

2020

Conference Publication

Understanding crop environments to adapt management practices and assist breeding

Chenu, K., Ababaei, B., Zheng, B., Chapman, S. and Hammer, G. (2020). Understanding crop environments to adapt management practices and assist breeding. InterDrought, Mexico City, Mexico, 9-13 March 2020.

Understanding crop environments to adapt management practices and assist breeding

2020

Journal Article

Linking genetic maps and simulation to optimize breeding for wheat flowering time in current and future climates

Bogard, Matthieu, Biddulph, Ben, Zheng, Bangyou, Hayden, Matthew, Kuchel, Haydn, Mullan, Dan, Allard, Vincent, Gouis, Jacques Le and Chapman, Scott C. (2020). Linking genetic maps and simulation to optimize breeding for wheat flowering time in current and future climates. Crop Science, 60 (2), 678-699. doi: 10.1002/csc2.20113

Linking genetic maps and simulation to optimize breeding for wheat flowering time in current and future climates

2020

Journal Article

Designing crops for adaptation to the drought and high-temperature risks anticipated in future climates

Hammer, Graeme. L., McLean, Greg, van Oosterom, Erik, Chapman, Scott, Zheng, Bangyou, Wu, Alex, Doherty, Alastair and Jordan, David (2020). Designing crops for adaptation to the drought and high-temperature risks anticipated in future climates. Crop Science, 60 (2), 605-621. doi: 10.1002/csc2.20110

Designing crops for adaptation to the drought and high-temperature risks anticipated in future climates

2020

Conference Publication

APSIM platform for modelling and simulation of agricultural systems: overview, examples and applications

Hammer, G., Chapman, S., Chenu, K. and McLean, G. (2020). APSIM platform for modelling and simulation of agricultural systems: overview, examples and applications. CGIAR Webinar - Platform for Big Data in Agriculture, Virtual, 6 February 2020.

APSIM platform for modelling and simulation of agricultural systems: overview, examples and applications

2020

Conference Publication

Quantifying drought tolerant crop traits using sensing technologies to enhance selection in sorghum breeding trials

Potgieter, A.B., Laws, Kenneth, George-Jaeggli, Barbara, Hunt, Colleen, Reynolds Massey-Reed, Sean, Lamprecht, Marnie, Liedtke, Jana D., Zhao, Yan, Chapman, Scott, Borrell, Andrew K., Mace, Emma S., Hammer, Graeme L. and Jordan, David R. (2020). Quantifying drought tolerant crop traits using sensing technologies to enhance selection in sorghum breeding trials. Interdrought 2020, Mexico City, Mexico, 9-13 March 2020.

Quantifying drought tolerant crop traits using sensing technologies to enhance selection in sorghum breeding trials

2020

Conference Publication

Integrated high-throughput phenotyping with high resolution multispectral, hyperspectral and 3D point cloud techniques for screening wheat genotypes on sodic soils

Choudhury, Malini Roy, Christopher, Jack, Apan, Armando, Chapman, Scott, Menzies, Neal and Dang, Yash (2020). Integrated high-throughput phenotyping with high resolution multispectral, hyperspectral and 3D point cloud techniques for screening wheat genotypes on sodic soils. Third International Tropical Agriculture Conference (TROPAG 2019), Brisbane, Australia, 11–13 November 2019. Basel, Switzerland: MDPI . doi: 10.3390/proceedings2019036206

Integrated high-throughput phenotyping with high resolution multispectral, hyperspectral and 3D point cloud techniques for screening wheat genotypes on sodic soils

2019

Journal Article

From QTLs to adaptation landscapes: using genotype-to-phenotype models to characterize G×E over time

Bustos-Korts, Daniela, Malosetti, Marcos, Chenu, Karine, Chapman, Scott, Boer, Martin P., Zheng, Bangyou and van Eeuwijk, Fred A. (2019). From QTLs to adaptation landscapes: using genotype-to-phenotype models to characterize G×E over time. Frontiers in Plant Science, 10 1540, 1540. doi: 10.3389/fpls.2019.01540

From QTLs to adaptation landscapes: using genotype-to-phenotype models to characterize G×E over time