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2022

Journal Article

Proteomics and glycoproteomics of beer and wine

Liu, Shulei, Kerr, Edward D., Pegg, Cassandra L. and Schulz, Benjamin L. (2022). Proteomics and glycoproteomics of beer and wine. Proteomics, 22 (15-16) 2100329, 1-11. doi: 10.1002/pmic.202100329

Proteomics and glycoproteomics of beer and wine

2022

Journal Article

Recent advances in the production of recombinant factor IX: bioprocessing and cell engineering

Beauglehole, Aiden C, Roche Recinos, Dinora, Pegg, Cassandra L, Lee, Yih Yean, Turnbull, Victor, Herrmann, Susann, Marcellin, Esteban, Howard, Christopher B and Schulz, Benjamin L (2022). Recent advances in the production of recombinant factor IX: bioprocessing and cell engineering. Critical Reviews in Biotechnology, 43 (3), 1-19. doi: 10.1080/07388551.2022.2036691

Recent advances in the production of recombinant factor IX: bioprocessing and cell engineering

2022

Journal Article

Identification and characterisation of sPEPs in Cryptococcus neoformans

Erpf, Paige E., Chua, Sheena M.H., Phung, Toan K., Kerr, Edward D., Rothnagel, Joseph A., Schulz, Benjamin L. and Fraser, James A. (2022). Identification and characterisation of sPEPs in Cryptococcus neoformans. Fungal Genetics and Biology, 160 103688, 103688. doi: 10.1016/j.fgb.2022.103688

Identification and characterisation of sPEPs in Cryptococcus neoformans

2022

Journal Article

Extended characterisation of five archival tick-borne viruses provides insights for virus discovery in Australian ticks

O’Brien, Caitlin A., Huang, Bixing, Warrilow, David, Hazlewood, Jessamine E., Bielefeldt-Ohmann, Helle, Hall-Mendelin, Sonja, Pegg, Cassandra L., Harrison, Jessica J., Paramitha, Devina, Newton, Natalee D., Schulz, Benjamin L., Suhrbier, Andreas, Hobson-Peters, Jody and Hall, Roy A. (2022). Extended characterisation of five archival tick-borne viruses provides insights for virus discovery in Australian ticks. Parasites and Vectors, 15 (1) 59, 59. doi: 10.1186/s13071-022-05176-z

Extended characterisation of five archival tick-borne viruses provides insights for virus discovery in Australian ticks

2022

Journal Article

Fine-tuning the spike: role of the nature and topology of the glycan shield in the structure and dynamics of the SARS-CoV-2 S

Harbison, Aoife M., Fogarty, Carl A., Phung, Toan K., Satheesan, Akash, Schulz, Benjamin L. and Fadda, Elisa (2022). Fine-tuning the spike: role of the nature and topology of the glycan shield in the structure and dynamics of the SARS-CoV-2 S. Chemical Science, 13 (2), 386-395. doi: 10.1039/d1sc04832e

Fine-tuning the spike: role of the nature and topology of the glycan shield in the structure and dynamics of the SARS-CoV-2 S

2021

Journal Article

Author correction: community evaluation of glycoproteomics informatics solutions reveals high-performance search strategies for serum glycopeptide analysis

Kawahara, Rebeca, Chernykh, Anastasia, Alagesan, Kathirvel, Bern, Marshall, Cao, Weiqian, Chalkley, Robert J., Cheng, Kai, Choo, Matthew S., Edwards, Nathan, Goldman, Radoslav, Hoffmann, Marcus, Hu, Yingwei, Huang, Yifan, Kim, Jin Young, Kletter, Doron, Liquet, Benoit, Liu, Mingqi, Mechref, Yehia, Meng, Bo, Neelamegham, Sriram, Nguyen-Khuong, Terry, Nilsson, Jonas, Pap, Adam, Park, Gun Wook, Parker, Benjamin L., Pegg, Cassandra L., Penninger, Josef M., Phung, Toan K., Pioch, Markus ... Thaysen-Andersen, Morten (2021). Author correction: community evaluation of glycoproteomics informatics solutions reveals high-performance search strategies for serum glycopeptide analysis. Nature Methods, 19 (1), 130-130. doi: 10.1038/s41592-021-01368-0

Author correction: community evaluation of glycoproteomics informatics solutions reveals high-performance search strategies for serum glycopeptide analysis

2021

Journal Article

The post-translational modification landscape of commercial beers

Kerr, Edward D., Caboche, Christopher H., Pegg, Cassandra L., Phung, Toan K., Gonzalez Viejo, Claudia, Fuentes, Sigfredo, Howes, Mark T., Howell, Kate and Schulz, Benjamin L. (2021). The post-translational modification landscape of commercial beers. Scientific Reports, 11 (1) 15890, 15890. doi: 10.1038/s41598-021-95036-0

The post-translational modification landscape of commercial beers

2021

Journal Article

Community evaluation of glycoproteomics informatics solutions reveals high-performance search strategies for serum glycopeptide analysis

Kawahara, Rebeca, Chernykh, Anastasia, Alagesan, Kathirvel, Bern, Marshall, Cao, Weiqian, Chalkley, Robert J., Cheng, Kai, Choo, Matthew S., Edwards, Nathan, Goldman, Radoslav, Hoffmann, Marcus, Hu, Yingwei, Huang, Yifan, Kim, Jin Young, Kletter, Doron, Liquet, Benoit, Liu, Mingqi, Mechref, Yehia, Meng, Bo, Neelamegham, Sriram, Nguyen-Khuong, Terry, Nilsson, Jonas, Pap, Adam, Park, Gun Wook, Parker, Benjamin L., Pegg, Cassandra L., Penninger, Josef M., Phung, Toan K., Pioch, Markus ... Thaysen-Andersen, Morten (2021). Community evaluation of glycoproteomics informatics solutions reveals high-performance search strategies for serum glycopeptide analysis. Nature Methods, 18 (11), 1304-1316. doi: 10.1038/s41592-021-01309-x

Community evaluation of glycoproteomics informatics solutions reveals high-performance search strategies for serum glycopeptide analysis

2021

Other Outputs

Extended Characterisation of Five Archival Tick-borne Viruses Provides Insights for Virus Discovery in Australian Ticks

O’Brien, Caitlin A., Huang, Bixing, Warrilow, David, Hazlewood, Jessamine E., Bielefeldt-Ohmann, Helle, Hall-Mendelin, Sonja, Pegg, Cassandra L., Harrison, Jessica J., Paramitha, Devina, Newton, Natalee D., Schulz, Benjamin L., Suhrbier, Andreas, Hobson-Peters, Jody and Hall, Roy Alexander (2021). Extended Characterisation of Five Archival Tick-borne Viruses Provides Insights for Virus Discovery in Australian Ticks. doi: 10.21203/rs.3.rs-981794/v1

Extended Characterisation of Five Archival Tick-borne Viruses Provides Insights for Virus Discovery in Australian Ticks

2021

Journal Article

Cancer associated mutations in Sec61γ alter the permeability of the ER translocase

Witham, Christopher M., Paxman, Aleshanee L., Baklous, Lamprini, Steuart, Robert F.L., Schulz, Benjamin L. and Mousley, Carl J. (2021). Cancer associated mutations in Sec61γ alter the permeability of the ER translocase. PLoS Genetics, 17 (8) e1009780, e1009780. doi: 10.1371/journal.pgen.1009780

Cancer associated mutations in Sec61γ alter the permeability of the ER translocase

2021

Journal Article

TorsinA folding and N-linked glycosylation are sensitive to redox homeostasis

Honer, Jonas, Niemeyer, Katie M., Fercher, Christian, Diez Tissera, Ana L., Jaberolansar, Noushin, Jafrani, Yohaann M. A., Zhou, Chun, Caramelo, Julio J., Shewan, Annette M., Schulz, Benjamin L., Brodsky, Jeffrey L. and Zacchi, Lucía F. (2021). TorsinA folding and N-linked glycosylation are sensitive to redox homeostasis. Biochimica et Biophysica Acta. Molecular Cell Research, 1868 (9) 119073, 119073. doi: 10.1016/j.bbamcr.2021.119073

TorsinA folding and N-linked glycosylation are sensitive to redox homeostasis

2021

Journal Article

Biopharmaceutical quality control with mass spectrometry

Liu, Shulei and Schulz, Benjamin L (2021). Biopharmaceutical quality control with mass spectrometry. Bioanalysis, 13 (16), 1275-1291. doi: 10.4155/bio-2021-0123

Biopharmaceutical quality control with mass spectrometry

2021

Journal Article

Human blood microRNA hsa-miR-21-5p induces vitellogenin in the mosquito Aedes aegypti

Perdomo, Hugo D., Hussain, Mazhar, Parry, Rhys, Etebari, Kayvan, Hedges, Lauren M., Zhang, Guangmei, Schulz, Benjamin L. and Asgari, Sassan (2021). Human blood microRNA hsa-miR-21-5p induces vitellogenin in the mosquito Aedes aegypti. Communications Biology, 4 (1) 856, 856. doi: 10.1038/s42003-021-02385-7

Human blood microRNA hsa-miR-21-5p induces vitellogenin in the mosquito Aedes aegypti

2021

Journal Article

Proteomics reveals commitment to germination in barley seeds is marked by loss of stress response proteins and mobilisation of nutrient reservoirs

Osama, Sarah K., Kerr, Edward D., Yousif, Adel M., Phung, Toan K., Kelly, Alison M., Fox, Glen P. and Schulz, Benjamin L. (2021). Proteomics reveals commitment to germination in barley seeds is marked by loss of stress response proteins and mobilisation of nutrient reservoirs. Journal of Proteomics, 242 104221, 104221. doi: 10.1016/j.jprot.2021.104221

Proteomics reveals commitment to germination in barley seeds is marked by loss of stress response proteins and mobilisation of nutrient reservoirs

2021

Journal Article

N-glycosylation on Oryza sativa root germin-like protein 1 is conserved but not required for stability or activity

Rubbab, Tehseen, Pegg, Cassandra L., Phung, Toan K., Nouwens, Amanda S., Yeo, K.Y. Benjamin, Zacchi, Lucia F., Muhammad, Amna, Naqvi, S.M. Saqlan and Schulz, Benjamin L. (2021). N-glycosylation on Oryza sativa root germin-like protein 1 is conserved but not required for stability or activity. Biochemical and Biophysical Research Communications, 553, 72-77. doi: 10.1016/j.bbrc.2021.03.024

N-glycosylation on Oryza sativa root germin-like protein 1 is conserved but not required for stability or activity

2021

Journal Article

Serum proteomes of Santa Gertrudis cattle before and after infestation with Rhipicephalus australis ticks

Raza, Ali, Schulz, Benjamin L., Nouwens, Amanda, Jackson, Lousie A., Piper, Emily K., James, Peter, Jonsson, Nicholas N. and Tabor, Ala E. (2021). Serum proteomes of Santa Gertrudis cattle before and after infestation with Rhipicephalus australis ticks. Parasite Immunology, 43 (7) e12836, e12836. doi: 10.1111/pim.12836

Serum proteomes of Santa Gertrudis cattle before and after infestation with Rhipicephalus australis ticks

2021

Journal Article

Coagulation factor IX analysis in bioreactor cell culture supernatant predicts quality of the purified product

Zacchi, Lucia F., Roche-Recinos, Dinora, Pegg, Cassandra L., Phung, Toan K., Napoli, Mark, Aitken, Campbell, Sandford, Vanessa, Mahler, Stephen M., Lee, Yih Yean, Schulz, Benjamin L. and Howard, Christopher B. (2021). Coagulation factor IX analysis in bioreactor cell culture supernatant predicts quality of the purified product. Communications Biology, 4 (1) 390, 390. doi: 10.1038/s42003-021-01903-x

Coagulation factor IX analysis in bioreactor cell culture supernatant predicts quality of the purified product

2021

Journal Article

Benchtop micro-mashing: high-throughput, robust, experimental beer brewing

Kerr, Edward D., Caboche, Christopher H., Josh, Peter and Schulz, Benjamin L. (2021). Benchtop micro-mashing: high-throughput, robust, experimental beer brewing. Scientific Reports, 11 (1) 1480, 1-10. doi: 10.1038/s41598-020-80442-7

Benchtop micro-mashing: high-throughput, robust, experimental beer brewing

2021

Journal Article

The AGE receptor, OST48 drives podocyte foot process effacement and basement membrane expansion (alters structural composition)

Zhuang, Aowen, Yap, Felicia Y. T., Borg, Danielle J., McCarthy, Domenica, Fotheringham, Amelia, Leung, Sherman, Penfold, Sally A., Sourris, Karly C., Coughlan, Melinda T., Schulz, Benjamin L. and Forbes, Josephine M. (2021). The AGE receptor, OST48 drives podocyte foot process effacement and basement membrane expansion (alters structural composition). Endocrinology, Diabetes and Metabolism, 4 (3) e00278, e00278. doi: 10.1002/edm2.278

The AGE receptor, OST48 drives podocyte foot process effacement and basement membrane expansion (alters structural composition)

2021

Book Chapter

Grass to glass: better beer through proteomics

Kerr, Edward D., Fox, Glen P. and Schulz, Benjamin L. (2021). Grass to glass: better beer through proteomics. Comprehensive Foodomics. (pp. 407-416) Amsterdam, Netherlands: Elsevier. doi: 10.1016/b978-0-08-100596-5.22869-2

Grass to glass: better beer through proteomics