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2006 Journal Article Differential use of signal peptides and membrane domains is a common occurrence in the protein output of transcriptional unitsDavis, Melissa J., Hanson, Kelly A., Clark, Francis, Fink, J. Lynn, Zhang, Fasheng, Kasukawa, Takeya, Kai, Chikatoshi, Kawai, Jun, Carninci, Piero, Hayashizaki, Yoshihide and Teasdale, Rohan D. (2006). Differential use of signal peptides and membrane domains is a common occurrence in the protein output of transcriptional units. Plos Genetics, 2 (4) e46, 554-563. doi: 10.1371/journal.pgen.0020046 |
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2006 Journal Article Transcript annotation in FANTOM3: Mouse gene catalog based on physical cDNAsMaeda, Norihiro, Kasukawa,Takeya, Frith, Martin, Aturaliya, Rajith N., Forrest, Alistair R. R., Ravasi,Timothy, Teasdale, Rohan D., Wells, Christine A., Hume,David A. and Hayashizaki,Yoshihide (2006). Transcript annotation in FANTOM3: Mouse gene catalog based on physical cDNAs. PLoS Genetics, 2 (4) e62, 498-503. doi: 10.1371/journal.pgen.0020062 |
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2006 Journal Article PhosphoregDB: The tissue and sub-cellular distribution of mammalian protein kinases and phosphatasesForrest, Alistair R. R., Taylor, Darrin F., Fink, J. Lynn, Gongora, M. Milena, Flegg, Cameron, Teasdale, Rohan D., Suzuki, Harukazu, Kanamori, Mutsumi, Kai, Chikatoshi, Hayashizaki, Yoshihide and Grimmond, Sean M. (2006). PhosphoregDB: The tissue and sub-cellular distribution of mammalian protein kinases and phosphatases. BMC Bioinformatics, 7 (82) 82, 1-11. doi: 10.1186/1471-2105-7-82 |
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2006 Conference Publication Evaluation and comparison of mammalian subcellular localization prediction methodsSprenger, Josefine, Fink, J. Lynn and Teasdale, Rohan D. (2006). Evaluation and comparison of mammalian subcellular localization prediction methods. International Conference in Bioinformatics- InCoB2006, New Delhi, India, 18-20 December, 2006. London: BioMed Central Ltd. doi: 10.1186/1471-2105-7-S5-S3 |
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2006 Journal Article Subcellular localization of mammalian type II membrane proteinsAturaliya,Rajith N., Fink, J. Lynn, Davis, Melissa J., Hanson, Kelly A., Miranda,Kevin C., Forrest,Alistair R. R., Grimmond, Sean M., Suzuki,Harukazu, Kanamori,Mutsumi, Kai,Chikatoshi, Kawai,Jun, Carninci,Piero, Hayashizaki,Yoshihide and Teasdale,Rohan D. (2006). Subcellular localization of mammalian type II membrane proteins. Traffic, 7 (5), 613-625. doi: 10.1111/j.1600-0854.2006.00407.x |
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2006 Journal Article Differential gene expression in the developing mouse ureterMitchell, E. K. L., Taylor, D. F., Woods, K., Davis, M. J., Nelson, A. L., Teasdale, R. D., Grimmond, S. M., Little, M. H., Bertram, J. F. and Caruana, G. (2006). Differential gene expression in the developing mouse ureter. Gene Expression Patterns, 6 (5), 519-538. doi: 10.1016/j.modgep.2005.10.008 |
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2006 Journal Article Identification and analysis of novel genes expressed in the mouse embryonic facial primordiaBennetts, Jennifer S., Fowles, Lindsay F., Butterfield, Natalie C., Berkman, Jennifer L., Teasdale, Rohan D., Simpson, Fiona and Wicking, Carol (2006). Identification and analysis of novel genes expressed in the mouse embryonic facial primordia. Frontiers In Bioscience, 11 (SUPPL. 2), 2631-2646. doi: 10.2741/1997 |
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2006 Journal Article LOCATE: a mouse protein subcellular localization databaseFink, J. Lynn, Aturaliya, Rajith N., Davis, Melissa J., Zhang, Fasheng, Hanson, Kelly, Teasdale, Melvena S., Kai, Chikatoshi, Kawai, Jun, Carninci, Piero, Hayashizaki, Yoshihide and Teasdale, Rohan D. (2006). LOCATE: a mouse protein subcellular localization database. Nucleic Acids Research, 34 (Supp. 1), D213-D217. doi: 10.1093/nar/gkj069 |
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2006 Journal Article MemO: A Consensus Approach to the Annotation of a Protein's Membrane OrganizationDavis, Melissa J., Zhang, Fasheng, Yuan, Zheng and Teasdale, Rohan D. (2006). MemO: A Consensus Approach to the Annotation of a Protein's Membrane Organization. In Silico Biology, 6 (5), 387-399. |
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2006 Conference Publication Automated subcellar phenotype classification : An introduction and recent resultsHamilton, A, Pantelic, S, Hanson,, Fink, L, Karunaratne, M and Teasdale, R D (2006). Automated subcellar phenotype classification : An introduction and recent results. 2006 Workshop on Intelligent Systems for Bioinformatics (WISB 2006), Hobart, Australia, 4/12/2006. Sydney, Australia: Australian Computer Society. |
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2006 Journal Article Spatial gene expression in the T-stage mouse metanephrosCaruana, Georgina, Cullen-McEwen, Luise, Nelson, Amy L., Kostoulias, Xenia, Woods, Kyra, Gardiner, Brooke, Davis, Melissa J., Taylor, Darrin F., Teasdale, Rohan D., Grimmond, Sean M., Little, Melissa H. and Bertram, John F. (2006). Spatial gene expression in the T-stage mouse metanephros. Gene Expression Patterns, 6 (8), 807-825. doi: 10.1016/j.modgep.2006.02.001 |
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2006 Journal Article Predicting the solvent accessibility of transmembrane residues from protein sequenceYuan, Z., Zhang, F. S., Davis, M. J., Boden, M. and Teasdale, R. D. (2006). Predicting the solvent accessibility of transmembrane residues from protein sequence. Journal of Proteome Research, 5 (5), 1063-1070. doi: 10.1021/pr050397b |
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2005 Journal Article A Novel Mammalian Retromer Component, Vps26BKerr, Markus C., Bennetts, Jennifer S., Simpson, Fiona, Thomas, Elaine C., Flegg, Cameron, Gleeson, Paul A., Wicking, Carol and Teasdale, Rohan D. (2005). A Novel Mammalian Retromer Component, Vps26B. Traffic, 6 (11), 991-1001. doi: 10.1111/j.1600-0854.2005.00328.x |
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2005 Journal Article The transcriptional landscape of the mammalian genomeThe FANTOM Consortium, Gough, J., Frith, M. C., Ravasi, T., Wells, C., Forrest, A. R. R., Davis, M. J., Aturaliya, R. N., Bailey, T. L., Crowe, M. L., Faulkner, G., Pang, K. C., Teasdale, R. D., Grimmond, S. M., Mattick, J. S., Hume, D. A. and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Core Team) (2005). The transcriptional landscape of the mammalian genome. Science, 309 (5740), 1559-1563. doi: 10.1126/science.1112014 |
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2005 Journal Article A novel hook-related protein family and the characterization of Hook-related protein 1Simpson, Fiona, Martin, Sally, Evans, Timothy M., Kerr, Markus, James, David E., Parton, Robert G., Teasdale, Rohan D. and Wicking, Carol (2005). A novel hook-related protein family and the characterization of Hook-related protein 1. Traffic, 6 (6), 442-458. doi: 10.1111/j.1600-0854.2005.00289.x |
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2005 Journal Article In vivo analysis of growth hormone receptor signaling domains and their associated transcriptsRowland, Jennifer E., Lichanska, Agnieszka M., Kerr, Linda M., White, Mary, d'Aniello, Elisabetta M., Maher, Sheryl L., Brown, Richard, Teasdale, Rohan D., Noakes, Peter G. and Waters, Michael J. (2005). In vivo analysis of growth hormone receptor signaling domains and their associated transcripts. Molecular and Cellular Biology, 25 (5), 2072-2072. doi: 10.1128/MCB.25.5.2072.2005 |
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2005 Journal Article In vivo analysis of growth hormone receptor signaling domains and their associated transcriptsRowland, Jennifer E., Lichanska, Agnieszka M., Kerr, Linda M., White, Mary, d'Aniello, Elisabetta M., Maher, Sheryl L., Brown, Richard, Teasdale, Rohan D., Noakes, Peter G. and Waters, Michael J. (2005). In vivo analysis of growth hormone receptor signaling domains and their associated transcripts. Molecular And Cellular Biology, 25 (5), 66-77. doi: 10.1128/MCB.25.1.66-77.2005 |
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2005 Journal Article Polarized trafficking of E-cadherin is regulated by Rac1 and Cdc42 in Madin-Darby canine kidney cellsWang, B., Wylie, F. G., Teasdale, R. D. and Stow, J. L. (2005). Polarized trafficking of E-cadherin is regulated by Rac1 and Cdc42 in Madin-Darby canine kidney cells. American Journal of Physiology-cell Physiology, 288 (6), C1411-C1419. doi: 10.1152/ajpcell.00533.2004 |
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2005 Book Chapter Expression and localization of proteins in mammalian cellsStow, J. L. and Teasdale, R. D. (2005). Expression and localization of proteins in mammalian cells. Encyclopedia of Genetics, Genomics, Proteomics and Bioformatics. (pp. ---) edited by P S E Little and J S E Quackenbush. London, England: John Wiley & Sons. doi: 10.1002/047001153x.g208202 |
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2005 Journal Article Prediction of protein B-factor profilesYuan, Z., Bailey, T. L. and Teasdale, R. D. (2005). Prediction of protein B-factor profiles. Proteins-structure Function And Bioinformatics, 58 (4), 905-912. doi: 10.1002/prot.20375 |
