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2025 Other Outputs T1-weighted fMRI in mouse visual cortex using an Iron Oxide Nanoparticle contrast agent and Ultrashort Echo Time (UTE) imaging at 9.4 TJain, Naman, Bollmann, Saskia, Chuang, Kai-Hsiang, Polimeni, Jonathan R. and Barth, Markus (2025). T1-weighted fMRI in mouse visual cortex using an Iron Oxide Nanoparticle contrast agent and Ultrashort Echo Time (UTE) imaging at 9.4 T. doi: 10.1101/2025.03.17.643844 |
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2025 Journal Article Hippocampal subfield volume alterations and associations with severity measures in long COVID and ME/CFS: A 7T MRI studyThapaliya, Kiran, Marshall-Gradisnik, Sonya, Eaton-Fitch, Natalie, Barth, Markus, Inderyas, Maira and Barnden, Leighton (2025). Hippocampal subfield volume alterations and associations with severity measures in long COVID and ME/CFS: A 7T MRI study. PLoS One, 20 (1) e0316625, 1-13. doi: 10.1371/journal.pone.0316625 |
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2024 Journal Article VesselBoost: a Python toolbox for small blood vessel segmentation in human magnetic resonance angiography dataXu, Marshall, Ribeiro, Fernanda L., Barth, Markus, Bernier, Michaël, Bollmann, Steffen, Chatterjee, Soumick, Cognolato, Francesco, Gulban, Omer F., Itkyal, Vaibhavi, Liu, Siyu, Mattern, Hendrik, Polimeni, Jonathan R., Shaw, Thomas B., Speck, Oliver and Bollmann, Saskia (2024). VesselBoost: a Python toolbox for small blood vessel segmentation in human magnetic resonance angiography data. Aperture Neuro, 4, 1-13. doi: 10.52294/001c.123217 |
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2024 Journal Article Three-dimensional EPI with shot-selective CAIPIRIHANA for rapid high-resolution quantitative susceptibility mapping at 3 TTourell, Monique, Jin, Jin, Bachrata, Beata, Stewart, Ashley, Ropele, Stefan, Enzinger, Christian, Bollmann, Saskia, Bollmann, Steffen, Robinson, Simon Daniel, O'Brien, Kieran and Barth, Markus (2024). Three-dimensional EPI with shot-selective CAIPIRIHANA for rapid high-resolution quantitative susceptibility mapping at 3 T. Magnetic Resonance in Medicine, 92 (3), 997-1010. doi: 10.1002/mrm.30101 |
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2024 Journal Article Long-term improvement in hippocampal-dependent learning ability in healthy, aged individuals following high intensity interval trainingBlackmore, Daniel G., Schaumberg, Mia A., Ziaei, Maryam, Belford, Samuel, To, Xuan Vinh, O’Keeffe, Imogen, Bernard, Anne, Mitchell, Jules, Hume, Emily, Rose, Grace L., Shaw, Thomas, York, Ashley, Barth, Markus, Cooper, Elizabeth J., Skinner, Tina L., Nasrallah, Fatima, Riek, Stephan and Bartlett, Perry F. (2024). Long-term improvement in hippocampal-dependent learning ability in healthy, aged individuals following high intensity interval training. Aging and Disease, 16 (3), 1732-1754. doi: 10.14336/AD.2024.0642 |
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2024 Journal Article B1+ inhomogeneity mitigation for diffusion weighted MRI at 7T using TR‐FOCI pulsesAbbasi‐Rad, Shahrokh, Cloos, Martijn A., Jin, Jin, O'Brien, Kieran and Barth, Markus (2024). B1+ inhomogeneity mitigation for diffusion weighted MRI at 7T using TR‐FOCI pulses. Magnetic Resonance in Medicine, 91 (6), 2508-2518. doi: 10.1002/mrm.30024 |
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2024 Journal Article Neurochemical predictors of generalised learning induced by brain stimulation and trainingEhrhardt, Shane E., Wards, Yohan, Rideaux, Reuben, Marjańska, Małgorzata, Jin, Jin, Cloos, Martijn A., Deelchand, Dinesh K., Zöllner, Helge J., Saleh, Muhammad G., Hui, Steve C. N., Ali, Tonima, Shaw, Thomas B., Barth, Markus, Mattingley, Jason B., Filmer, Hannah L. and Dux, Paul E. (2024). Neurochemical predictors of generalised learning induced by brain stimulation and training. The Journal of Neuroscience, 44 (21) e1676232024, 1-15. doi: 10.1523/jneurosci.1676-23.2024 |
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2024 Conference Publication A data-driven framework for whole-brain network modeling with simultaneous EEG-SEEG dataLou, Kexin, Li, Jingzhe, Barth, Markus and Liu, Quanying (2024). A data-driven framework for whole-brain network modeling with simultaneous EEG-SEEG data. 13th IFIP TC 12 International Conference, Shenzhen, China, 3-6 May 2024. Cham, Switzerland: Springer Cham. doi: 10.1007/978-3-031-57808-3_24 |
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2024 Journal Article Subcortical and default mode network connectivity is impaired in myalgic encephalomyelitis/chronic fatigue syndromeInderyas, Maira, Thapaliya, Kiran, Marshall-Gradisnik, Sonya, Barth, Markus and Barnden, Leighton (2024). Subcortical and default mode network connectivity is impaired in myalgic encephalomyelitis/chronic fatigue syndrome. Frontiers in Neuroscience, 17 1318094, 1318094. doi: 10.3389/fnins.2023.1318094 |
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2024 Conference Publication T1-weighted fMRI in mouse visual cortex at 0.1 mm resolution using a UTE sequence after iron-oxide contrast injectionJain, Naman, Bollmann, Saskia, Chuang, Kai-Hsiang, Polimeni, Jonathan and Barth, Markus (2024). T1-weighted fMRI in mouse visual cortex at 0.1 mm resolution using a UTE sequence after iron-oxide contrast injection. 2024 ISMRM & ISMRT Annual Meeting, Singapore, 4-9 May 2024. Concord, CA United States: ISMRM. doi: 10.58530/2024/3410 |
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2024 Conference Publication Fast, High-resolution Whole Brain SWI and QSM with CAIPIRINHA 3D-EPI and Deep Learning ReconstructionJin, Jin, Nickel, Dominik, Pfeuffer, Josef, Tourell, Monique, Stewart, Ashley, Bollmann, Steffen, Bollmann, Saskia, Barth, Markus and O‘Brien, Kieran (2024). Fast, High-resolution Whole Brain SWI and QSM with CAIPIRINHA 3D-EPI and Deep Learning Reconstruction. 2024 ISMRM & ISMRT Annual Meeting, Singapore, 4-9 May 2024. Concord, CA United States: ISMRM. doi: 10.58530/2024/2822 |
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2024 Conference Publication Reliability and reproducibility of neurochemical profiles obtained with sLASER and STEAM at 3T and 7T in lower and upper limb regionsEftekhari, Zeinab, Shaw, Thomas B., Deelchand, Dinesh, Marjańska, Małgorzata, Bogner, Wolfgang and Barth, Markus (2024). Reliability and reproducibility of neurochemical profiles obtained with sLASER and STEAM at 3T and 7T in lower and upper limb regions. ISMRM Annual Meeting, Singapore, Singapore, 4 - 9 May 2024. Berkeley, CA, United States: International Society for Magnetic Resonance in Medicine. doi: 10.58530/2024/1835 |
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2024 Conference Publication Computationally efficient multi-echo QSMEckstein, Korbinian, Dao, Thanh, Stewart, Ashley, Robinson, Simon, Barth, Markus and Bollmann, Steffen (2024). Computationally efficient multi-echo QSM. 2023 ISMRM & ISMRT Annual Meeting & Exhibition, Toronto, ON, Canada, 3-8 June 2023. Berkeley, CA, United States: International Society for Magnetic Resonance in Medicine. doi: 10.58530/2023/4184 |
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2024 Conference Publication Longitudinal reproducibility of 3D-FID-CRT-MRSI in the human brain at 3T and 7TEftekhari, Zeinab, Shaw, Thomas B., Eckstein, Korbinian, Strasser, Bernhard, Niess, Fabian, Hingerl, Lukas, Bogner, Wolfgang and Barth, Markus (2024). Longitudinal reproducibility of 3D-FID-CRT-MRSI in the human brain at 3T and 7T. ISMRM Annual Meeting, Singapore, Singapore, 4 - 9 May 2024. Berkeley, CA, United States: International Society for Magnetic Resonance in Medicine. doi: 10.58530/2024/1852 |
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2023 Journal Article Velocity selective spin labeling using parallel transmissionWu, Chia‐Yin, Jin, Jin, Dixon, Carl, Maillet, Donald, Barth, Markus and Cloos, Martijn A. (2023). Velocity selective spin labeling using parallel transmission. Magnetic Resonance in Medicine, 91 (4), 1576-1585. doi: 10.1002/mrm.29955 |
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2023 Journal Article Super-resolution QSM in little or No Additional Time for Imaging (NATIve) using 2D EPI imaging in 3 orthogonal planesBachrata, Beata, Bollmann, Steffen, Jin, Jin, Tourell, Monique, Dal-Bianco, Assunta, Trattnig, Siegfried, Barth, Markus, Ropele, Stefan, Enzinger, Christian and Robinson, Simon Daniel (2023). Super-resolution QSM in little or No Additional Time for Imaging (NATIve) using 2D EPI imaging in 3 orthogonal planes. NeuroImage, 283 120419, 1-17. doi: 10.1016/j.neuroimage.2023.120419 |
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2023 Journal Article Improving portable low-field MRI image quality through image-to-image translation using paired low- and high-field imagesIslam, Kh Tohidul, Zhong, Shenjun, Zakavi, Parisa, Chen, Zhifeng, Kavnoudias, Helen, Farquharson, Shawna, Durbridge, Gail, Barth, Markus, McMahon, Katie L., Parizel, Paul M., Dwyer, Andrew, Egan, Gary F., Law, Meng and Chen, Zhaolin (2023). Improving portable low-field MRI image quality through image-to-image translation using paired low- and high-field images. Scientific Reports, 13 (1) 21183, 1-13. doi: 10.1038/s41598-023-48438-1 |
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2023 Other Outputs Deep-learning-enabled differentiation between intraprostatic gold fiducial markers and calcification in quantitative susceptibility mappingStewart, Ashley Wilton, Goodwin, Jonathan, Richardson, Matthew, Robinson, Simon Daniel, O’Brien, Kieran, Jin, Jin, Barth, Markus and Bollmann, Steffen (2023). Deep-learning-enabled differentiation between intraprostatic gold fiducial markers and calcification in quantitative susceptibility mapping. |
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2023 Journal Article Improved dynamic distortion correction for fMRI using single‐echo EPI and a readout‐reversed first image (REFILL)Robinson, Simon Daniel, Bachrata, Beata, Eckstein, Korbinian, Bollmann, Saskia, Bollmann, Steffen, Dymerska, Barbara, Hodono, Shota, Cloos, Martijn, Tourell, Monique, Jin, Jin, O'Brien, Kieran, Reutens, David C., Trattnig, Siegfried, Enzinger, Christian and Barth, Markus (2023). Improved dynamic distortion correction for fMRI using single‐echo EPI and a readout‐reversed first image (REFILL). Human Brain Mapping, 44 (15), 5095-5112. doi: 10.1002/hbm.26440 |
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2023 Journal Article Altered brain connectivity in Long Covid during cognitive exertion: a pilot studyBarnden, Leighton, Thapaliya, Kiran, Eaton-Fitch, Natalie, Barth, Markus and Marshall-Gradisnik, Sonya (2023). Altered brain connectivity in Long Covid during cognitive exertion: a pilot study. Frontiers in Neuroscience, 17 1182607, 1182607. doi: 10.3389/fnins.2023.1182607 |
