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2023

Journal Article

Analysis of domestication loci in wild rice populations

Hasan, Sharmin, Furtado, Agnelo and Henry, Robert (2023). Analysis of domestication loci in wild rice populations. Plants, 12 (3) 489, 1-14. doi: 10.3390/plants12030489

Analysis of domestication loci in wild rice populations

2023

Journal Article

Breaking the tight genetic linkage between the a1 and sh2 genes led to the development of anthocyanin-rich purple-pericarp super-sweetcorn

Anirban, Apurba, Hayward, Alice, Hong, Hung T., Masouleh, Ardashir Kharabian, Henry, Robert J. and O'Hare, Tim J. (2023). Breaking the tight genetic linkage between the a1 and sh2 genes led to the development of anthocyanin-rich purple-pericarp super-sweetcorn. Scientific Reports, 13 (1) 1050, 1-13. doi: 10.1038/s41598-023-28083-4

Breaking the tight genetic linkage between the a1 and sh2 genes led to the development of anthocyanin-rich purple-pericarp super-sweetcorn

2023

Journal Article

Organ-specific expression of genes associated with the UDP-glucose metabolism in sugarcane (Saccharum spp. hybrids)

Mason, Patrick J., Hoang, Nam V., Botha, Frederik C., Furtado, Agnelo, Marquardt, Annelie and Henry, Robert J. (2023). Organ-specific expression of genes associated with the UDP-glucose metabolism in sugarcane (Saccharum spp. hybrids). BMC Genomics, 24 (1) 18, 1-18. doi: 10.1186/s12864-023-09124-8

Organ-specific expression of genes associated with the UDP-glucose metabolism in sugarcane (Saccharum spp. hybrids)

2023

Journal Article

Genomic characterization supporting the development of new food and crop options from the Australian flora

Henry, Robert J. (2023). Genomic characterization supporting the development of new food and crop options from the Australian flora. Sustainable Food Technology, 1 (3), 337-347. doi: 10.1039/d3fb00001j

Genomic characterization supporting the development of new food and crop options from the Australian flora

2023

Journal Article

Sequence variations associated with novel purple-pericarp super-sweetcorn compared to its purple-pericarp maize and white super-sweetcorn parents

Anirban, Apurba, Masouleh, Ardashir Kharabian, Henry, Robert J. and O’Hare, Tim J. (2023). Sequence variations associated with novel purple-pericarp super-sweetcorn compared to its purple-pericarp maize and white super-sweetcorn parents. Molecular Genetics and Genomics, 298 (6), 1395-1405. doi: 10.1007/s00438-023-02060-y

Sequence variations associated with novel purple-pericarp super-sweetcorn compared to its purple-pericarp maize and white super-sweetcorn parents

2023

Journal Article

Phylogenetic relationships among Australian native citrus species based upon complete chloroplast genomes and single copy nuclear genes

Nakandala, Upuli, Furtado, Agnelo, Smith, Malcolm W., Williams, Darren C. and Henry, Robert J. (2023). Phylogenetic relationships among Australian native citrus species based upon complete chloroplast genomes and single copy nuclear genes. Tropical Plants, 2 (1) 21, 1-8. doi: 10.48130/tp-2023-0021

Phylogenetic relationships among Australian native citrus species based upon complete chloroplast genomes and single copy nuclear genes

2022

Journal Article

Variant analysis of grain size related genes in the genus Sorghum

Ananda, Galaihalage K. S., Norton, Sally L., Barnes, Eve, Furtado, Agnelo, Møller, Birger Lindberg, Gleadow, Roslyn and Henry, Robert J. (2022). Variant analysis of grain size related genes in the genus Sorghum. Genetic Resources and Crop Evolution, 70 (5), 1377-1394. doi: 10.1007/s10722-022-01508-1

Variant analysis of grain size related genes in the genus Sorghum

2022

Journal Article

Gene expression in the developing seed of wild and domesticated rice

Hasan, Sharmin, Furtado, Agnelo and Henry, Robert (2022). Gene expression in the developing seed of wild and domesticated rice. International Journal of Molecular Sciences, 23 (21) 13351, 1-21. doi: 10.3390/ijms232113351

Gene expression in the developing seed of wild and domesticated rice

2022

Journal Article

Balancing incentives for innovation in new plant varieties

MacDonald, Hamish and Henry, Robert J. (2022). Balancing incentives for innovation in new plant varieties. Nature Plants, 8 (11), 1206-1208. doi: 10.1038/s41477-022-01246-3

Balancing incentives for innovation in new plant varieties

2022

Journal Article

Transcriptome and metabolome integration in sugarcane through culm development

Perlo, Virginie, Furtado, Agnelo, Botha, Frederik C., Margarido, Gabriel R. A., Hodgson‐Kratky, Katrina, Choudhary, Hemant, Gladden, John, Simmons, Blake and Henry, Robert J. (2022). Transcriptome and metabolome integration in sugarcane through culm development. Food and Energy Security, 11 (4) e421, 1-16. doi: 10.1002/fes3.421

Transcriptome and metabolome integration in sugarcane through culm development

2022

Journal Article

A haplotype resolved chromosomal level avocado genome allows analysis of novel avocado genes

Nath, Onkar, Fletcher, Stephen J., Hayward, Alice, Shaw, Lindsay M., Kharabian Masouleh, Ardashir, Furtado, Agnelo, Henry, Robert J. and Mitter, Neena (2022). A haplotype resolved chromosomal level avocado genome allows analysis of novel avocado genes. Horticulture Research, 9 uhac157, 1-10. doi: 10.1093/hr/uhac157

A haplotype resolved chromosomal level avocado genome allows analysis of novel avocado genes

2022

Journal Article

Progress in plant genome sequencing

Henry, Robert J. (2022). Progress in plant genome sequencing. Applied Biosciences, 1 (2), 113-128. doi: 10.3390/applbiosci1020008

Progress in plant genome sequencing

2022

Journal Article

Systems seed biology to understand and manipulate rice grain quality and nutrition

Badoni, Saurabh, Parween, Sabiha, Henry, Robert J. and Sreenivasulu, Nese (2022). Systems seed biology to understand and manipulate rice grain quality and nutrition. Critical Reviews in Biotechnology, 43 (5), 716-733. doi: 10.1080/07388551.2022.2058460

Systems seed biology to understand and manipulate rice grain quality and nutrition

2022

Journal Article

The long read transcriptome of rice (oryza sativa ssp. japonica var. Nipponbare) reveals novel transcripts

Hasan, Sharmin, Huang, Lichun, Liu, Qiaoquan, Perlo, Virginie, O'Keeffe, Angela, Margarido, Gabriel Rodrigues Alves, Furtado, Agnelo and Henry, Robert J (2022). The long read transcriptome of rice (oryza sativa ssp. japonica var. Nipponbare) reveals novel transcripts. Rice, 15 (1) 29, 29. doi: 10.1186/s12284-022-00577-1

The long read transcriptome of rice (oryza sativa ssp. japonica var. Nipponbare) reveals novel transcripts

2022

Journal Article

Evolution of an intermediate C4 photosynthesis in the non-foliar tissues of the Poaceae

Rangan, Parimalan, Wankhede, Dhammaprakash P., Subramani, Rajkumar, Chinnusamy, Viswanathan, Malik, Surendra K., Baig, Mirza Jaynul, Singh, Kuldeep and Henry, Robert (2022). Evolution of an intermediate C4 photosynthesis in the non-foliar tissues of the Poaceae. Photosynthesis Research, 153 (3), 125-134. doi: 10.1007/s11120-022-00926-7

Evolution of an intermediate C4 photosynthesis in the non-foliar tissues of the Poaceae

2022

Journal Article

Tracking habitat or testing its suitability? Similar distributional patterns can hide very different histories of persistence versus nonequilibrium dynamics

Yap, Jia-Yee Samantha, Rossetto, Maurizio, Das, Sourav, Wilson, Peter D., Beaumont, Linda J. and Henry, Robert J. (2022). Tracking habitat or testing its suitability? Similar distributional patterns can hide very different histories of persistence versus nonequilibrium dynamics. Evolution, 76 (6), 1209-1228. doi: 10.1111/evo.14460

Tracking habitat or testing its suitability? Similar distributional patterns can hide very different histories of persistence versus nonequilibrium dynamics

2022

Journal Article

Allele expression biases in mixed-ploid sugarcane accessions

Correr, Fernando Henrique, Furtado, Agnelo, Franco Garcia, Antonio Augusto, Henry, Robert James and Rodrigues Alves Margarido, Gabriel (2022). Allele expression biases in mixed-ploid sugarcane accessions. Scientific Reports, 12 (1) 8778, 1-10. doi: 10.1038/s41598-022-12725-0

Allele expression biases in mixed-ploid sugarcane accessions

2022

Journal Article

Testing the linearity assumption for starch structure-property relationships in rices

Zhao, Yingting, Henry, Robert J. and Gilbert, Robert G. (2022). Testing the linearity assumption for starch structure-property relationships in rices. Frontiers in Nutrition, 9 916751, 1-16. doi: 10.3389/fnut.2022.916751

Testing the linearity assumption for starch structure-property relationships in rices

2022

Journal Article

Unveiling the potential of water as a co-solvent in microwave-assisted delignification of sugarcane bagasse using ternary deep eutectic solvents

Chourasia, Vallari R., Bisht, Meena, Pant, Kamal K. and Henry, Robert J. (2022). Unveiling the potential of water as a co-solvent in microwave-assisted delignification of sugarcane bagasse using ternary deep eutectic solvents. Bioresource Technology, 351 127005, 1-10. doi: 10.1016/j.biortech.2022.127005

Unveiling the potential of water as a co-solvent in microwave-assisted delignification of sugarcane bagasse using ternary deep eutectic solvents

2022

Journal Article

Potential of genome editing to capture diversity from Australian wild rice relatives

Abdullah, Muhammad, Okemo, Pauline, Furtado, Agnelo and Henry, Robert (2022). Potential of genome editing to capture diversity from Australian wild rice relatives. Frontiers in Genome Editing, 4 875243. doi: 10.3389/fgeed.2022.875243

Potential of genome editing to capture diversity from Australian wild rice relatives