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2012 Journal Article Acute lipopolysaccharide priming boosts inflammasome activation independently of inflammasome sensor inductionSchroder, Kate, Sagulenko, Vitaliya, Zamoshnikova, Alina, Richards, Ayanthi A., Cridland, Jasmyn A., Irvine, Katharine M., Stacey, Katryn J. and Sweet, Matthew J. (2012). Acute lipopolysaccharide priming boosts inflammasome activation independently of inflammasome sensor induction. Immunobiology, 217 (12), 1325-1329. doi: 10.1016/j.imbio.2012.07.020 |
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2012 Journal Article Liver repercussions of defective gut surveillanceIrvine, Katharine M., Schroder, Elizabeth E. and Powell, Elizabeth E. (2012). Liver repercussions of defective gut surveillance. Hepatology, 56 (3), 1174-1177. doi: 10.1002/hep.25944 |
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2012 Journal Article The mammalian PYHIN gene family: Phylogeny, evolution and expressionCridland, Jasmyn A., Curley, Eva Z., Wykes, Michelle N ., Schroder, Kate, Sweet, Matthew J., Roberts, Tara L., Ragan, Mark A., Kassahn, Karin S. and Stacey, Katryn J. (2012). The mammalian PYHIN gene family: Phylogeny, evolution and expression. BMC Evolutionary Biology, 12 (1) 140, 140.1-140.33. doi: 10.1186/1471-2148-12-140 |
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2012 Journal Article Novel insights into the innate immune response to non-tuberculous MycobacteriaHeinz, Leonhard X. and Schroder, Kate (2012). Novel insights into the innate immune response to non-tuberculous Mycobacteria. Immunology and Cell Biology, 90 (6), 568-570. doi: 10.1038/icb.2011.86 |
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2012 Journal Article NLRC5 deficiency selectively impairs MHC class idependent lymphocyte killing by cytotoxic T cellsStaehli, Francesco, Ludigs, Kristina, Heinz, Leonhard X., Seguin-Estevez, Queralt, Ferrero, Isabel, Braun, Marion, Schroder, Kate, Rebsamen, Manuele, Tardivel, Aubry, Mattmann, Chantal, MacDonald, H. Robson, Romero, Pedro, Reith, Walter, Guarda, Greta and Tschopp, Jurg (2012). NLRC5 deficiency selectively impairs MHC class idependent lymphocyte killing by cytotoxic T cells. Journal of Immunology, 188 (8), 3820-3828. doi: 10.4049/jimmunol.1102671 |
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2012 Journal Article The death domain-containing protein Unc5CL is a novel MyD88-independent activator of the pro-inflammatory IRAK signaling cascadeHeinz, L. X., Rebsamen, M., Rossi, D. C., Staehli, F., Schroder, K., Quadroni, M., Gross, O., Schneider, P. and Tschopp, J. (2012). The death domain-containing protein Unc5CL is a novel MyD88-independent activator of the pro-inflammatory IRAK signaling cascade. Cell Death and Differentiation, 19 (4), 722-731. doi: 10.1038/cdd.2011.147 |
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2011 Journal Article Update of the FANTOM web resource: From mammalian transcriptional landscape to its dynamic regulationKawaji, H, Severin, J, Lizio, M, Forrest, ARR, van Nimwegen, E, Rehli, M, Schroder, K, Irvine, K, Suzuki, H, Carninci, P, Hayashizaki, Y and Daub, CO (2011). Update of the FANTOM web resource: From mammalian transcriptional landscape to its dynamic regulation. Nucleic Acids Research, 39 (Supp. 1), D856-D860. doi: 10.1093/nar/gkq1112 |
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2011 Journal Article Macrophage activation and differentiation signals regulate Schlafen-4 gene expression: Evidence for Schlafen-4 as a modulator of myelopoiesisVan Zuylen, Wendy J., Garceau, Valerie, Idris, Adi, Schroder, Kate, Irvine, Katharine M., Lattin, Jane E., Ovchinnikov, Dmitry A., Perkins, Andrew C., Cook, Andrew D., Hamilton, John A., Hertzog, Paul J., Stacey, Katryn J., Kellie, Stuart, Hume, David A. and Sweet, Matthew J. (2011). Macrophage activation and differentiation signals regulate Schlafen-4 gene expression: Evidence for Schlafen-4 as a modulator of myelopoiesis. PLoS One, 6 (1) e15723, e15723-1-e15723-13. doi: 10.1371/journal.pone.0015723 |
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2011 Journal Article Differential expression of NLRP3 among hematopoietic cellsGuarda, Greta, Zenger, Manuel, Yazdi, Amir S., Schroder, Kate, Ferrero, Isabel, Menu, Philippe, Tardivel, Aubry, Mattmann, Chantal and Tschopp, Jurg (2011). Differential expression of NLRP3 among hematopoietic cells. Journal of Immunology, 186 (4), 2529-2534. doi: 10.4049/jimmunol.1002720 |
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2010 Journal Article Phosphoinositide 3-kinase δ regulates membrane fission of Golgi carriers for selective cytokine secretionLow, Pei Ching, Misaki, Ryo, Schroder, Kate, Stanley, Amanda C., Sweet, Matthew J., Teasdale, Rohan D., Vanhaesebroeck, Bart, Meunier, Frédéric A., Taguchi, Tomohiko and Stow, Jennifer L. (2010). Phosphoinositide 3-kinase δ regulates membrane fission of Golgi carriers for selective cytokine secretion. Journal of Cell Biology, 190 (6), 1053-1065. doi: 10.1083/jcb.201001028 |
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2010 Journal Article The combination of gene perturbation assay and ChIP-chip reveals functional direct target genes for IRF8 in THP-1 cellsKubosaki, A, Lindgren, G, Tagami, M, Simon, C, Tomaru, Y, Miura, H, Suzuki, T, Arner, E, Forrest, ARR, Irvine, KM, Schroder, K, Hasegawa, Y, Kanamori-Katayama, M, Rehli, M, Hume, DA, Kawai, J, Suzuki, M, Suzuki, H and Hayashizaki, Y (2010). The combination of gene perturbation assay and ChIP-chip reveals functional direct target genes for IRF8 in THP-1 cells. Molecular Immunology, 47 (14), 2295-2302. doi: 10.1016/j.molimm.2010.05.289 |
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2010 Journal Article Differential effects of selective HDAC inhibitors on macrophage inflammatory responses to the Toll-like receptor 4 agonist LPSHalili, Maria A., Andrews, Melanie R., Labzin, Larisa I., Schroder, Kate, Matthias, Gabriele, Cao, Chun, Lovelace, Erica, Reid, Robert C., Le, Giang T., Hume, David A., Irvine, Katharine M., Matthias, Patrick, Fairlie, David P. and Sweet, Matthew J. (2010). Differential effects of selective HDAC inhibitors on macrophage inflammatory responses to the Toll-like receptor 4 agonist LPS. Journal of Leukocyte Biology, 87 (6), 1103-1114. doi: 10.1189/jlb.0509363 |
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2009 Journal Article DAI/ZBP1 recruits RIP1 and RIP3 through RIP homotypic interaction motifs to activate NF-κBRebsamen, Manuele, Heinz, Leonhard X., Meylan, Etienne, Michallet, Marie-Cecile, Schroder, Kate, Hofmann, Kay, Vazquez, Jessica, Benedict, Chris A. and Tschopp, Jurg (2009). DAI/ZBP1 recruits RIP1 and RIP3 through RIP homotypic interaction motifs to activate NF-κB. EMBO Reports, 10 (8), 916-922. doi: 10.1038/embor.2009.109 |
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2009 Journal Article The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell lineSuzuki, H, Forrest, ARR, van Nimwegen, E, Daub, CO, Balwierz, PJ, Irvine, KM, Lassmann, T, Ravasi, T, Hasegawa, Y, de Hoon, MJL, Katayama, S, Schroder, K, Carninci, P, Tomaru, Y, Kanamori-Katayama, M, Kubosaki, A, Akalin, A, Ando, Y, Arner, E, Asada, M, Asahara, H, Bailey, T, Bajic, VB, Bauer, D, Beckhouse, AG, Bertin, N, Bjorkegren, J, Brombacher, F, Bulger, E ... Riken Omics Science Center (2009). The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line. Nature Genetics, 41 (5), 553-562. doi: 10.1038/ng.375 |
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2009 Journal Article The regulated retrotransposon transcriptome of mammalian cellsFaulkner, Geoffrey J., Kimura, Yasumasa, Daub, Carsten O., Wani, Shivangi, Plessy, Charles, Irvine, Katharine M., Schroder, Kate, Cloonan, Nicole, Steptoe, Anita L., Lassmann, Timo, Waki, Kazunori, Hornig, Nadine, Arakawa, Takahiro, Takahashi, Hazuki, Kawai, Jun, Forrest, Alistair R. R., Suzuki, Harukazu, Hayashizaki, Yoshihide, Hume, David A., Orlando, Valerio, Grimmond, Sean M. and Carninci, Piero (2009). The regulated retrotransposon transcriptome of mammalian cells. Nature Genetics, 41 (5), 563-571. doi: 10.1038/ng.368 |
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2009 Journal Article Tiny RNAs associated with transcription start sites in animalsTaft, RJ, Glazov, EA, Cloonan, N, Simons, C, Stephen, S, Faulkner, GJ, Lassmann, T, Forrest, ARR, Grimmond, SM, Schroder, K, Irvine, K, Arakawa, T, Nakamura, M, Kubosaki, A, Hayashida, K, Kawazu, C, Murata, M, Nishiyori, H, Fukuda, S, Kawai, J, Daub, CO, Hume, DA, Suzuki, H, Orlando, V, Carninci, P, Hayashizaki, Y and Mattick, JS (2009). Tiny RNAs associated with transcription start sites in animals. Nature Genetics, 41 (5), 572-578. doi: 10.1038/ng.312 |
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2009 Journal Article Data-driven normalization strategies for high-throughput quantitative RT-PCRMar, Jessica C., Kimura, Yasumasa, Schroder, Kate, Irvine, Katherine M., Hayashizaki, Yoshihide, Suzuki, Harukazu, Hume, David and Quackenbush, John (2009). Data-driven normalization strategies for high-throughput quantitative RT-PCR. BMC Bioinformatics, 10 (1) 110, 110.1-110.10. doi: 10.1186/1471-2105-10-110 |
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2009 Journal Article Innate immunity: Cytoplasmic DNA sensing by the AIM2 inflammasomeSchroder, Kate, Muruve, Daniel A. and Tschopp, Jürg (2009). Innate immunity: Cytoplasmic DNA sensing by the AIM2 inflammasome. Current Biology, 19 (6), R262-R265. doi: 10.1016/j.cub.2009.02.011 |
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2009 Journal Article Colony-stimulating factor-1 (CSF-1) delivers a proatherogenic signal to human macrophagesIrvine, Katharine M., Andrews, Melanie R., Fernandez-Rojo, Manuel A., Schroder, Kate, Burns, Christopher J., Su, Stephen, Wilks, Andrew F., Parton, Robert G., Hume, David A. and Sweet, Matthew J. (2009). Colony-stimulating factor-1 (CSF-1) delivers a proatherogenic signal to human macrophages. Journal of Leukocyte Biology, 85 (2), 278-288. doi: 10.1189/jlb.0808497 |
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2008 Journal Article A rescue strategy for multimapping short sequence tags refines surveys of transcriptional activity by CAGEFaulkner, G. J., Forrest, A. R. R., Chalk, A. M., Schroder, K., Hayashizaki, Y., Carninci, P., Hume, D. A. and Grimmond, S. M. (2008). A rescue strategy for multimapping short sequence tags refines surveys of transcriptional activity by CAGE. Genomics, 91 (3), 281-288. doi: 10.1016/j.ygeno.2007.11.003 |
