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2011

Journal Article

Complete genome sequence of Isosphaera pallida type strain (IS1BT)

Goker, Markus, Cleland, David, Saunders, Elizabeth, Lapidus, Alla, Nolan, Matt, Lucas, Susan, Hammon, Nancy, Deshpande, Shweta, Cheng, Jan-Fang, Tapia, Roxane, Han, Cliff, Goodwin, Lynne, Pitluck, Sam, Liolios, Konstantinos, Pagani, Ioanna, Ivanova, Natalia, Mavromatis, Konstantinos, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Detter, John C., Beck, Brian, Woyke, Tanja, Bristow, James, Eisen, Jonathan A. ... Klenk, Hans-Peter (2011). Complete genome sequence of Isosphaera pallida type strain (IS1BT). Standards in Genomic Sciences, 4 (1), 63-71. doi: 10.4056/sigs.1533840

Complete genome sequence of Isosphaera pallida type strain (IS1BT)

2011

Journal Article

Complete genome sequence of Bacteroides helcogenes type strain (P 36-108T)

Pati, Amrita, Gronow, Sabine, Zeytun, Ahmet, Lapidus, Alla, Nolan, Matt, Hammon, Nancy, Deshpande, Shweta, Cheng, Jan-Fang, Tapia, Roxane, Han, Cliff, Goodwin, Lynne, Pitluck, Sam, Liolios, Konstantinos, Pagani, Ioanna, Ivanova, Natalia, Mavromatis, Konstantinos, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Detter, John C., Brambilla, Evelyne, Rohde, Manfred, Goeker, Markus, Woyke, Tanja, Bristow, James, Eisen, Jonathan A. ... Lucas, Susan (2011). Complete genome sequence of Bacteroides helcogenes type strain (P 36-108T). Standards in Genomic Sciences, 4 (1), 45-53. doi: 10.4056/sigs.1513795

Complete genome sequence of Bacteroides helcogenes type strain (P 36-108T)

2011

Journal Article

Complete genome sequence of the thermophilic sulfur-reducer Hippea maritima type strain (MH2T)

Huntemann, Marcel, Lu, Megan, Nolan, Matt, Lapidus, Alla, Lucas, Susan, Hammon, Nancy, Deshpande, Shweta, Cheng, Jan-Feng, Tapia, Roxanne, Han, Cliff, Goodwin, Lynne, Pitluck, Sam, Liolios, Konstantinos, Pagani, Ioanna, Ivanova, Natalia, Ovchinikova, Galina, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Jeffries, Cynthia D., Detter, John C., Brambilla, Evelynne-Marie, Rohde, Manfred, Spring, Stefan, Goker, Markus, Woyke, Tanja, Bristow, James ... Mavromatis, Konstantinos (2011). Complete genome sequence of the thermophilic sulfur-reducer Hippea maritima type strain (MH2T). Standards in Genomic Sciences, 4 (3), 303-311. doi: 10.4056/sigs.1814460

Complete genome sequence of the thermophilic sulfur-reducer Hippea maritima type strain (MH2T)

2011

Journal Article

Complete genome sequence of the hyperthermophilic chemolithoautotroph Pyrolobus fumarii type strain (1A(T))

Anderson, Iain, Goker, Markus, Nolan, Matt, Lucas, Susan, Hammon, Nancy, Deshpande, Shweta, Cheng, Jan-Fang, Tapia, Roxanne, Han, Cliff, Goodwin, Lynne, Pitluck, Sam, Huntemann, Marcel, Liolios, Konstantinos, Ivanova, Natalia, Pagani, Ioanna, Mavromatis, Konstantinos, Ovchinikova, Galina, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Brambilla, Evelyne-Marie, Huber, Harald, Yasawong, Montri, Rohde, Manfred, Spring, Stefan, Abt, Birte, Sikorski, Johannes ... Lapidus, Alla (2011). Complete genome sequence of the hyperthermophilic chemolithoautotroph Pyrolobus fumarii type strain (1A(T)). Standards in Genomic Sciences, 4 (3), 381-392. doi: 10.4056/sigs.2014648

Complete genome sequence of the hyperthermophilic chemolithoautotroph Pyrolobus fumarii type strain (1A(T))

2011

Journal Article

Complete genome sequence of Truepera radiovictrix type strain (RQ-24 T)

Ivanova, Natalia, Rohde, Christine, Munk, Christine, Nolan, Matt, Lucas, Susan, del Rio,Tijana Glavina, Tice, Hope, Deshpande, Shweta, Cheng, Jan-Fang, Tapia, Roxane, Han, Cliff, Goodwin, Lynne, Pitluck. Sam, Liolios, Konstantinos, Mavromatis, Konstantinos, Mikhailova,Natalia, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Brambilla, Evelyne, Rohde, , Manfred, Goker, Markus, Tindall, Brian J., Woyke, Tanja, Bristow, James ... Lapidus,Alla (2011). Complete genome sequence of Truepera radiovictrix type strain (RQ-24 T). Standards in Genomic Sciences, 4 (1), 91-96. doi: 10.4056/sigs.1563919

Complete genome sequence of Truepera radiovictrix type strain (RQ-24 T)

2011

Journal Article

Complete genome sequence of mahella australiensis type strain (50-1 BONT)

Sikorski, Johannes, Teshima, Hazuki, Nolan, Matt, Lucas, Susan, Hammon, Nancy, Deshpande, Shweta, Cheng, Jan-Fang, Pitluck, Sam, Liolios, Konstantinos, Pagani, Ioanna, Ivanova, Natalia, Huntemann, Marcel, Mavromatis, Konstantinos, Ovchinikova, Galina, Pati, Amrita, Tapia, Roxane, Han, Cliff, Goodwin, Lynne, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Ngatchou-Djao, Oliver Duplex, Rohde, Manfred, Pukall, Rudiger, Spring, Stefan, Abt, Birte, Goker, Markus, Detter, John C. ... Lapidus, Alla (2011). Complete genome sequence of mahella australiensis type strain (50-1 BONT). Standards in Genomic Sciences, 4 (3), 331-341. doi: 10.4056/sigs.1864526

Complete genome sequence of mahella australiensis type strain (50-1 BONT)

2011

Journal Article

Complete genome sequence of the gliding, heparinolytic Pedobacter saltans type strain (113(T))

Liolios, Konstantinos, Sikorski, Johannes, Lu, Meagan, Nolan, Matt, Lapidus, Alla, Lucas, Susan, Hammon, Nancy, Deshpande, Shweta, Cheng, Jan-Feng, Tapia, Roxanne, Han, Cliff, Goodwin, Lynne, Pitluck, Sam, Huntemann, Marcel, Ivanova, Natalia, Pagani, Ioanna, Mavromatis, Konstantinos, Ovchinikova, Galina, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Brambilla, Evelyne-Marie, Kotsyurbenko, Oleg, Rohde, Manfred, Tindall, Brian J., Abt, Birte, Goker, Markus ... Kyrpides, Nikos C. (2011). Complete genome sequence of the gliding, heparinolytic Pedobacter saltans type strain (113(T)). Standards in Genomic Sciences, 5 (1), 30-40. doi: 10.4056/sigs.2154937

Complete genome sequence of the gliding, heparinolytic Pedobacter saltans type strain (113(T))

2011

Journal Article

Identification of a haloalkaliphilic and thermostable cellulase with improved ionic liquid tolerance

Zhang, Tao, Datta, Supratim, Eichler, Jerry, Ivanova, Natalia, Axen, Seth D., Kerfeld, Cheryl A., Chen, Feng, Kyrpides, Nikos, Hugenholtz, Philip, Cheng, Jan-Fang, Sale, Kenneth L., Simmons, Blake and Rubin, Eddy (2011). Identification of a haloalkaliphilic and thermostable cellulase with improved ionic liquid tolerance. Green Chemistry, 13 (8), 2083-2090. doi: 10.1039/c1gc15193b

Identification of a haloalkaliphilic and thermostable cellulase with improved ionic liquid tolerance

2011

Journal Article

Complete genome sequence of Treponema succinifaciens type strain (6091(T))

Han, Cliff, Gronow, Sabine, Teshima, Hazuki, Lapidus, Alla, Nolan, Matt, Lucas, Susan, Hammon, Nancy, Deshpande, Shweta, Cheng, Jan-Feng, Zeytun, Ahmed, Tapia, Roxanne, Goodwin, Lynne, Pitluck, Sam, Liolios, Konstantinos, Pagani, Ioanna, Ivanova, Natalia, Mavromatis, Konstantinos, Mikhailova, Natalia, Huntemann, Marcel, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Brambilla, Evelyne-Marie, Rohde, Manfred, Goker, Markus, Woyke, Tanja, Bristow, James ... Detter, John C. (2011). Complete genome sequence of Treponema succinifaciens type strain (6091(T)). Standards in Genomic Sciences, 4 (3), 361-370. doi: 10.4056/sigs.1984594

Complete genome sequence of Treponema succinifaciens type strain (6091(T))

2011

Journal Article

Non-contiguous finished genome sequence and contextual data of the filamentous soil bacterium Ktedonobacter racemifer type strain (SOSP1-21(T))

Chang, Yun-Juan, Land, Miriam, Hauser, Loren, Chertkov, Olga, Del Rio, Tijana Galvina, Nolan, Matt, Copeland, Alex, Tice, Hope, Cheng, Jan-Feng, Lucas, Susan, Han, Cliff, Goodwin, Lynne, Pitluck, Sam, Ivanova, Natalia, Ovchinikova, Galina, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Mavromatis, Konstantinos, Liolios, Konstantinos, Brettin, Thomas, Fiebig, Anne, Rohde, Manfred, Abt, Birte, Goker, Markus, Detter, John C., Woyke, Tanja, Bristow, James, Eisen, Jonathan A. ... Lapidus, Alla (2011). Non-contiguous finished genome sequence and contextual data of the filamentous soil bacterium Ktedonobacter racemifer type strain (SOSP1-21(T)). Standards in Genomic Sciences, 5 (1), 97-111. doi: 10.4056/sigs.2114901

Non-contiguous finished genome sequence and contextual data of the filamentous soil bacterium Ktedonobacter racemifer type strain (SOSP1-21(T))

2011

Journal Article

Complete genome sequence of Desulfobulbus propionicus type strain (1pr3 T)

Pagani, Ioanna, Lapidus, Alla, Nolan, Matt, Lucas, Susan, Hammon, Nancy, Desh-Pande, Shweta, Cheng, Jan-Fang, Chertkov, Olga, Davenport, Karen, Tapia, Roxane, Han, Cliff, Goodwin, Lynne, Pitluck, Sam, Liolios, Konstantinos, Mavromatis, Konstantinos, Ivanova, Natalia, Mikhailova, Natalia, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Detter, John C., Brambilla, Evelyne, Kannan, K. Palani, Djao, Olivier D. Ngatchou, Rohde, Manfred ... Klenk, Hans-Peter (2011). Complete genome sequence of Desulfobulbus propionicus type strain (1pr3 T). Standards in Genomic Sciences, 4 (1), 100-110. doi: 10.4056/sigs.1613929

Complete genome sequence of Desulfobulbus propionicus type strain (1pr3 T)

2011

Journal Article

Complete genome sequence of Cellulophaga algicola type strain (IC166(T))

Abt, Birte, Lu, Megan, Misra, Monica, Han, Cliff, Nolan, Matt, Lucas, Susan, Hammon, Nancy, Deshpande, Shweta, Cheng, Jan-Fang, Tapia, Roxane, Goodwin, Lynne, Pitluck, Sam, Liolios, Konstantinos, Pagani, Ioanna, Ivanova, Natalia, Mavromatis, Konstantinos, Ovchinikova, Galina, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Detter, John C., Brambilla, Evelyne, Rohde, Manfred, Tindall, Brian J., Goeker, Markus ... Lapidus, Alla (2011). Complete genome sequence of Cellulophaga algicola type strain (IC166(T)). Standards in Genomic Sciences, 4 (1), 72-80. doi: 10.4056/sigs.1543845

Complete genome sequence of Cellulophaga algicola type strain (IC166(T))

2010

Journal Article

Complete genome sequence of Desulfarculus baarsii type strain (2st14(T))

Sun, Hui, Spring, Stefan, Lapidus, Alla, Davenport, Karen, Del Rio, Tijana Glavina, Tice, Hope, Nolan, Matt, Copeland, Alex, Cheng, Jan-Fang, Lucas, Susan, Tapia, Roxanne, Goodwin, Lynne, Pitluck, Sam, Ivanova, Natalia, Pagani, Ionna, Mavromatis, Konstantinos, Ovchinnikova, Galina, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Detter, John C., Han, Cliff, Rohde, Manfred, Brambilla, Evelyne, Goeker, Markus, Woyke, Tanja ... Land, Miriam (2010). Complete genome sequence of Desulfarculus baarsii type strain (2st14(T)). Standards in Genomic Sciences, 3 (3), 276-284. doi: 10.4056/sigs.1243258

Complete genome sequence of Desulfarculus baarsii type strain (2st14(T))

2010

Journal Article

Complete genome sequence of Ilyobacter polytropus type strain (CuHbu1(T))

Sikorski, Johannes, Chertkov, Olga, Lapidus, Alla, Nolan, Matt, Lucas, Susan, Del Rio, Tijana Glavina, Tice, Hope, Cheng, Jan-Fang, Tapia, Roxane, Han, Cliff, Goodwin, Lynne, Pitluck, Sam, Liolios, Konstantinos, Ivanova, Natalia, Mavromatis, Konstantinos, Mikhailova, Natalia, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Brambilla, Evelyne, Yasawong, Montri, Rohde, Manfred, Pukall, Ruediger, Spring, Stefan, Goeker, Markus ... Klenk, Hans-Peter (2010). Complete genome sequence of Ilyobacter polytropus type strain (CuHbu1(T)). Standards in Genomic Sciences, 3 (3), 304-314. doi: 10.4056/sigs.1273360

Complete genome sequence of Ilyobacter polytropus type strain (CuHbu1(T))

2010

Journal Article

Non-contiguous finished genome sequence of Aminomonas paucivorans type strain (GLU-3(T))

Pitluck, Sam, Yasawong, Montri, Held, Brittany, Lapidus, Alla, Nolan, Matt, Copeland, Alex, Lucas, Susan, Del Rio, Tijana Glavina, Tice, Hope, Cheng, Jan-Fang, Chertkov, Olga, Goodwin, Lynne, Tapia, Roxane, Han, Cliff, Liolios, Konstantinos, Ivanova, Natalia, Mavromatis, Konstantinos, Ovchinnikova, Galina, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Pukall, Ruediger, Spring, Stefan, Rohde, Manfred, Sikorski, Johannes ... Klenk, Hans-Peter (2010). Non-contiguous finished genome sequence of Aminomonas paucivorans type strain (GLU-3(T)). Standards in Genomic Sciences, 3 (3), 285-293. doi: 10.4056/sigs.1253298

Non-contiguous finished genome sequence of Aminomonas paucivorans type strain (GLU-3(T))

2010

Journal Article

Complete genome sequence of Haloterrigena turkmenica type strain (4k T)

Saunders, Elisabeth, Tindall, Brian J., Fähnrich, Regine, Lapidus, Alla, Copeland, Alex, del Rio, Tijana Glavina, Lucas, Susan, Chen, Feng, Tice, Hope, Cheng, Jan-Fang, Han, Cliff, Detter, John C., Bruce, David, Goodwin, Lynne, Chain, Patrick, Pitluck, Sam, Pati, Amrita, Ivanova, Natalia, Mavromatis, Konstantinos, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Brettin, Thomas, Rohde, Manfred, Göker, Markus, Bristow, James ... Kyrpides, Nikos C. (2010). Complete genome sequence of Haloterrigena turkmenica type strain (4k T). Standards in Genomic Sciences, 2 (1), 107-116. doi: 10.4056/sigs.681272

Complete genome sequence of Haloterrigena turkmenica type strain (4k T)

2010

Journal Article

Erratum to: Complete genome sequence of Pirellula staleyi type strain (ATCC 27377 T)

Clum, Alicia, Tindall, Brian J., Sikorski, Johannes, Ivanova, Natalia, Mavromatis, Konstantinos, Lucas, Susan, Glavina Del Rio, Tijana, Nolan, Matt, Chen, Feng, Tice, Hope, Pitluck, Sam, Cheng, Jan-Fang, Chertkov, Olga, Thomas, Brettin, Han, Cliff, Detter, John C., Kuske, Cheryl, Bruce, David, Goodwin, Lynne, Ovchinikova, Galina, Pati, Amrita, Mikhailova, Natalia, Chen, Amy, Palaniappan, Krishna, Land, Miram, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Chain, Patrick ... Lapidus, Alla (2010). Erratum to: Complete genome sequence of Pirellula staleyi type strain (ATCC 27377 T). Standards in Genomic Sciences, 2 (2), 228-228. doi: 10.4056/sigs.88.1234

Erratum to: Complete genome sequence of Pirellula staleyi type strain (ATCC 27377 T)

2010

Journal Article

Multiple displacement amplification compromises quantitative analysis of metagenomes

Yilmaz, S, Allgaier, M and Hugenholtz, P (2010). Multiple displacement amplification compromises quantitative analysis of metagenomes. Nature Methods, 7 (12), 943-944. doi: 10.1038/nmeth1210-943

Multiple displacement amplification compromises quantitative analysis of metagenomes

2010

Journal Article

Complete genome sequence of Methanothermus fervidus type strain (V24S)

Anderson, Iain, Djao, Olivier Duplex, Misra, Monica, Chertkov, Olga, Nolan, Matt, Lucas, Susan, Lapidus, Alla, Giavina Del Rio, Tijana, Tice, Hope, Cheng, Jan-Fang, Tapia, Roxanne, Han. Cliff, Goodwin, Lynne, Pitluck, Sam, Liolios, Konstantinos, Ivanova, Natalia, Mavromatis, Konstantinos, Mikhailova, Natalia, Pati, Amrita, Brambilla, Evelyne, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Sikorski, Johannes, Spring, Stefan, Rohde, Manfred ... Kyrpides, Nikos C. (2010). Complete genome sequence of Methanothermus fervidus type strain (V24S). Standards in Genomic Sciences, 3 (3), 315-324. doi: 10.4056/sigs.1283367

Complete genome sequence of Methanothermus fervidus type strain (V24S)

2010

Journal Article

Evolutionary relationships of wild hominids recapitulated by gut microbial communities

Ochman, Howard, Worobey, Michael, Kuo, Chih-Horng, Ndjango, Jean-Bosco N., Peeters, Jean-Bosco N., Hahn, Beatrice H. and Hugenholtz, Philip (2010). Evolutionary relationships of wild hominids recapitulated by gut microbial communities. PLoS Biology, 8 (11 Article number e1000546) e1000546, e1000546. doi: 10.1371/journal.pbio.1000546

Evolutionary relationships of wild hominids recapitulated by gut microbial communities