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2010 Journal Article Experimental factors affecting PCR-based estimates of microbial species richness and evennessEngelbrektson, Anna, Kunin, Victor, Wrighton, Kelly C., Zvenigorodsky, Natasha, Chen, Feng, Ochman, Howard and Hugenholtz, Philip (2010). Experimental factors affecting PCR-based estimates of microbial species richness and evenness. ISME Journal, 4 (5), 642-647. doi: 10.1038/ismej.2009.153 |
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2010 Journal Article Complete genome sequence of Segniliparus rotundus type strain (CDC 1076(T))Sikorski, Johannes, Lapidus, Alla, Copeland, Alex, Misra, Monica, Del Rio, Tijana Glavina, Nolan, Matt, Lucas, Susan, Chen, Feng, Tice, Hope, Cheng, Jan-Fang, Jando, Marlen, Schneider, Susanne, Bruce, David, Goodwin, Lynne, Pitluck, Sam, Liolios, Konstantinos, Mikhailova, Natalia, Pati, Amrita, Ivanova, Natalia, Mavromatis, Konstantinos, Chen, Amy, Palaniappan, Krishna, Chertkov, Olga, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Brettin, Thomas, Detter, John C. ... Klenk, Hans-Peter (2010). Complete genome sequence of Segniliparus rotundus type strain (CDC 1076(T)). Standards in Genomic Sciences, 2 (2), 203-211. doi: 10.4056/sigs.791633 |
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2010 Journal Article Complete genome sequence of Nakamurella multipartita type strain (Y-104(T))Tice, Hope, Mayilraj, Shanmugam, Sims, David, Lapidus, Alla, Nolan, Matt, Lucas, Susan, Del Rio, Tijana Glavina, Copeland, Alex, Cheng, Jan-Fang, Meincke, Linda, Bruce, David, Goodwin, Lynne, Pitluck, Sam, Ivanova, Natalia, Mavromatis, Konstantinos, Ovchinnikova, Galina, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Detter, John C., Brettin, Thomas, Rohde, Manfred, Goeker, Markus, Bristow, Jim, Eisen, Jonathan A. ... Chen, Feng (2010). Complete genome sequence of Nakamurella multipartita type strain (Y-104(T)). Standards in Genomic Sciences, 2 (2), 168-175. doi: 10.4056/sigs.721316 |
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2010 Journal Article Complete genome sequence of Sebaldella termitidis type strain (NCTC 11300(T))Harmon-Smith, Miranda, Celia, Laura, Chertkov, Olga, Lapidus, Alla, Copeland, Alex, Del Rio, Tijana Glavina, Nolan, Matt, Lucas, Susan, Tice, Hope, Cheng, Jan-Fang, Han, Cliff, Detter, John C., Bruce, David, Goodwin, Lynne, Pitluck, Sam, Pati, Amrita, Liolios, Konstantinos, Ivanova, Natalia, Mavromatis, Konstantinos, Mikhailova, Natalia, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Brettin, Thomas, Goeker, Markus, Beck, Brian ... Chen, Feng (2010). Complete genome sequence of Sebaldella termitidis type strain (NCTC 11300(T)). Standards in Genomic Sciences, 2 (2), 220-227. doi: 10.4056/sigs.811799 |
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2010 Journal Article Complete genome sequence of Spirosoma linguale type strain (1(T))Lail, Kathleen, Sikorski, Johannes, Saunders, Elizabeth, Lapidus, Alla, Del Rio, Tijana Glavina, Copeland, Alex, Tice, Hope, Cheng, Jan-Fang, Lucas, Susan, Nolan, Matt, Bruce, David, Goodwin, Lynne, Pitluck, Sam, Ivanova, Natalia, Mavromatis, Konstantinos, Ovchinnikova, Galina, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Chain, Patrick, Brettin, Thomas, Detter, John C., Schuetze, Andrea, Rohde, Manfred, Tindall, Brian J. ... Chen, Feng (2010). Complete genome sequence of Spirosoma linguale type strain (1(T)). Standards in Genomic Sciences, 2 (2), 176-185. doi: 10.4056/sigs.741334 |
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2010 Journal Article Complete genome sequence of Xylanimonas cellulosilytica type strain (XIL07(T))Foster, Brian, Pukall, Ruediger, Abt, Birte, Nolan, Matt, Del Rio, Tijana Glavina, Chen, Feng, Lucas, Susan, Tice, Hope, Pitluck, Sam, Cheng, Jan-Fang, Chertkov, Olga, Brettin, Thomas, Han, Cliff, Detter, John C., Bruce, David, Goodwin, Lynne, Ivanova, Natalia, Mavromatis, Konstantinos, Pati, Amrita, Mikhailova, Natalia, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Chain, Patrick, Rohde, Manfred, Goeker, Markus ... Lapidus, Alla (2010). Complete genome sequence of Xylanimonas cellulosilytica type strain (XIL07(T)). Standards in Genomic Sciences, 2 (1), 1-8. doi: 10.4056/sigs.571102 |
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2010 Journal Article PyroTagger: a fast, accurate pipeline for analysis of rRNA amplicon pyrosequence dataKunin, Victor and Hugenholtz, Philip (2010). PyroTagger: a fast, accurate pipeline for analysis of rRNA amplicon pyrosequence data. The Open Journal, 1 (1) 1, 1-8. |
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2010 Journal Article Complete genome sequence of Vulcanisaeta distributa type strain (IC-017(T))Mavromatis, Konstantinos, Sikorski, Johannes, Pabst, Elke, Teshima, Hazuki, Lapidus, Alla, Lucas, Susan, Nolan, Matt, Del Rio, Tijana Glavina, Cheng, Jan-Fang, Bruce, David, Goodwin, Lynne, Pitluck, Sam, Liolios, Konstantinos, Ivanova, Natalia, Mikhailova, Natalia, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Rohde, Manfred, Spring, Stefan, Goeker, Markus, Wirth, Reinhard, Woyke, Tanja, Bristow, James, Eisen, Jonathan A. ... Kyrpides, Nikos C. (2010). Complete genome sequence of Vulcanisaeta distributa type strain (IC-017(T)). Standards in Genomic Sciences, 3 (2), 117-125. doi: 10.4056/sigs.1113067 |
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2010 Journal Article Targeted discovery of glycoside hydrolases from a switchgrass-adapted compost communityAllagier, Martin, Reddy, Amitha, Park, Joshua I., Ivanova, Natalia, D'haeseleer, Patrik, Lowry, Steve, Sapra, Rajat, Hazen, Terry C., Simmons, Blake A., VanderGheynst, Jean S. and Hugenholtz, Philip (2010). Targeted discovery of glycoside hydrolases from a switchgrass-adapted compost community. PLoS One, 5 (1) e8812, e8812-1-e8812-9. doi: 10.1371/journal.pone.0008812 |
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2010 Journal Article The genome sequence of Methanohalophilus mahii SLPT reveals differences in the energy metabolism among members of the Methanosarcinaceae inhabiting freshwater and saline environmentsSpring, Stefan, Scheuner, Carmen, Lapidus, Alla, Lucas, Susan, Del Rio, Tijana Glavina, Tice, Hope, Copeland, Alex, Cheng, Jan-Fang, Chen, Feng, Nolan, Matt, Saunders, Elizabeth, Pitluck, Sam, Liolios, Konstantinos, Ivanova, Natalia, Mavromatis, Konstantinos, Lykidis, Athanasios, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Goodwin, Lynne, Detter, John C., Brettin, Thomas, Rohde, Manfred, Goker, Markus, Woyke, Tanja ... Klenk, Hans-Peter (2010). The genome sequence of Methanohalophilus mahii SLPT reveals differences in the energy metabolism among members of the Methanosarcinaceae inhabiting freshwater and saline environments. Archaea- An International Microbiological Journal, 2010 690737, 1-16. doi: 10.1155/2010/690737 |
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2010 Journal Article Complete genome sequence of Kribbella flavida type strain (IFO 14399(T))Pukall, Ruediger, Lapidus, Alla, Del Rio, Tijana Glavina, Copeland, Alex, Tice, Hope, Cheng, Jan-Fang, Lucas, Susan, Chen, Feng, Nolan, Matt, LaButti, Kurt, Pati, Amrita, Ivanova, Natalia, Mavromatis, Konstantinos, Mikhailova, Natalia, Pitluck, Sam, Bruce, David, Goodwin, Lynne, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Chen, Amy, Palaniappan, Krishna, Chain, Patrick, Rohde, Manfred, Goeker, Markus, Bristow, Jim, Eisen, Jonathan A., Markowitz, Victor ... Brettin, Thomas (2010). Complete genome sequence of Kribbella flavida type strain (IFO 14399(T)). Standards in Genomic Sciences, 2 (2), 186-193. doi: 10.4056/sigs.731321 |
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2010 Journal Article Complete genome sequence of Sphaerobacter thermophilus type strain (S 6022(T))Pati, Amrita, LaButti, Kurt, Pukall, Ruediger, Nolan, Matt, Del Rio, Tijana Glavina, Tice, Hope, Cheng, Jan-Fang, Lucas, Susan, Chen, Feng, Copeland, Alex, Ivanova, Natalia, Mavromatis, Konstantinos, Mikhailova, Natalia, Pitluck, Sam, Bruce, David, Goodwin, Lynne, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Chen, Amy, Palaniappan, Krishna, Chain, Patrick, Brettin, Thomas, Sikorski, Johannes, Rohde, Manfred, Goeker, Markus, Bristow, Jim, Eisen, Jonathan A. ... Lapidus, Alla (2010). Complete genome sequence of Sphaerobacter thermophilus type strain (S 6022(T)). Standards in Genomic Sciences, 2 (1), 49-56. doi: 10.4056/sigs.601105 |
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2010 Journal Article Complete genome sequence of Veillonella parvula type strain (Te3(T))Gronow, Sabine, Welnitz, Sabine, Lapidus, Alla, Nolan, Matt, Ivanova, Natalia, Del Rio, Tijana Glavina, Copeland, Alex, Chen, Feng, Tice, Hope, Pitluck, Sam, Cheng, Jan-Fang, Saunders, Elizabeth, Brettin, Thomas, Han, Cliff, Detter, John C., Bruce, David, Goodwin, Lynne, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Pati, Amrita, Mavromatis, Konstantinos, Mikhailova, Natalia, Chen, Amy, Palaniappan, Krishna, Chain, Patrick, Rohde, Manfred, Goeker, Markus ... Lucas, Susan (2010). Complete genome sequence of Veillonella parvula type strain (Te3(T)). Standards in Genomic Sciences, 2 (1), 57-65. doi: 10.4056/sigs.521107 |
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2010 Journal Article Complete genome sequence of Intrasporangium calvum type strain (7 KIPT)Del Rio, Tijana Glavina, Chertkov, Olga, Yasawong, Montri, Lucas, Susan, Deshpande, Shweta, Cheng, Jan-Fang, Detter, Chris, Tapia, Roxanne, Han, Cliff, Goodwin, Lynne, Pitluck, Sam, Liolios, Konstantinos, Ivanova, Natalia, Mavromatis, Konstantinos, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Rohde, Manfred, Pukall, Ruediger, Sikorski, Johannes, Goeker, Markus, Woyke, Tanja, Bristow, James, Eisen, Jonathan A., Markowitz, Victor ... Lapidus, Alla (2010). Complete genome sequence of Intrasporangium calvum type strain (7 KIPT). Standards in Genomic Sciences, 3 (3), 294-303. doi: 10.4056/sigs.1263355 |
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2010 Journal Article Complete genome sequence of Chitinophaga pinensis type strain (UQM 2034(T))Del Rio, Tijana Glavina, Abt, Birte, Spring, Stefan, Lapidus, Alla, Nolan, Matt, Tice, Hope, Copeland, Alex, Cheng, Jan-Fang, Chen, Feng, Bruce, David, Goodwin, Lynne, Pitluck, Sam, Ivanova, Natalia, Mavromatis, Konstantinos, Mikhailova, Natalia, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Chain, Patrick, Saunders, Elizabeth, Detter, John C., Brettin, Thomas, Rohde, Manfred, Goeker, Markus, Bristow, Jim ... Lucas, Susan (2010). Complete genome sequence of Chitinophaga pinensis type strain (UQM 2034(T)). Standards in Genomic Sciences, 2 (1), 87-95. doi: 10.4056/sigs.661199 |
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2010 Journal Article Complete genome sequence of Planctomyces limnophilus type strain (Mu 290(T))LaButti, Kurt, Sikorski, Johannes, Schneider, Susanne, Nolan, Matt, Lucas, Susan, Del Rio, Tijana Glavina, Tice, Hope, Cheng, Jan-Fang, Goodwin, Lynne, Pitluck, Sam, Liolios, Konstantinos, Ivanova, Natalia, Mavromatis, Konstantinos, Mikhailova, Natalia, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Tindall, Brian J., Rohde, Manfred, Goeker, Markus, Woyke, Tanja, Bristow, James, Eisen, Jonathan A., Markowitz, Victor, Hugenholtz, Philip ... Lapidus, Alla (2010). Complete genome sequence of Planctomyces limnophilus type strain (Mu 290(T)). Standards in Genomic Sciences, 3 (1), 47-56. doi: 10.4056/sigs.1052813 |
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2010 Journal Article Complete genome sequence of Arcanobacterium haemolyticum type strain (11018(T))Yasawong, Montri, Teshima, Hazuki, Lapidus, Alla, Nolan, Matt, Lucas, Susan, Del Rio, Tijana Glavina, Tice, Hope, Cheng, Jan-Fang, Bruce, David, Detter, Chris, Tapia, Roxanne, Han, Cliff, Goodwin, Lynne, Pitluck, Sam, Liolios, Konstantinos, Ivanova, Natalia, Mavromatis, Konstantinos, Mikhailova, Natalia, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Rohde, Manfred, Sikorski, Johannes, Pukall, Ruediger, Goeker, Markus ... Klenk, Hans-Peter (2010). Complete genome sequence of Arcanobacterium haemolyticum type strain (11018(T)). Standards in Genomic Sciences, 3 (2), 126-135. doi: 10.4056/sigs.1123072 |
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2010 Journal Article Complete genome sequence of Acetohalobium arabaticum type strain (Z-7288(T))Sikorski, Johannes, Lapidus, Alla, Chertkov, Olga, Lucas, Susan, Copeland, Alex, Del Rio, Tijana Glavina, Nolan, Matt, Tice, Hope, Cheng, Jan-Fang, Han, Cliff, Brambilla, Evelyne, Pitluck, Sam, Liolios, Konstantinos, Ivanova, Natalia, Mavromatis, Konstantinos, Mikhailova, Natalia, Pati, Amrita, Bruce, David, Detter, Chris, Tapia, Roxanne, Goodwin, Lynne, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Rohde, Manfred, Goeker, Markus ... Klenk, Hans-Peter (2010). Complete genome sequence of Acetohalobium arabaticum type strain (Z-7288(T)). Standards in Genomic Sciences, 3 (1), 57-65. doi: 10.4056/sigs.1062906 |
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2010 Journal Article Complete genome sequence of Haloterrigena turkmenica type strain (4k(T))Saunders, Elisabeth, Tindall, Brian J., Faehnrich, Regine, Lapidus, Alla, Copeland, Alex, Del Rio, Tijana Glavina, Lucas, Susan, Chen, Feng, Tice, Hope, Cheng, Jan-Fang, Han, Cliff, Detter, John C., Bruce, David, Goodwin, Lynne, Chain, Patrick, Pitluck, Sam, Pati, Amrita, Ivanova, Natalia, Mavromatis, Konstantinos, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Brettin, Thomas, Rohde, Manfred, Goeker, Markus, Bristow, James ... Kyrpides, Nikos C. (2010). Complete genome sequence of Haloterrigena turkmenica type strain (4k(T)). Standards in Genomic Sciences, 2 (1), 107-116. doi: 10.4056/sigs.68923 |
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2010 Journal Article Complete genome sequence of Ignisphaera aggregans type strain (AQ1.S1(T))Goeker, Markus, Held, Brittany, Lapidus, Alla, Nolan, Matt, Spring, Stefan, Yasawong, Montri, Lucas, Susan, Del Rio, Tijana Glavina, Tice, Hope, Cheng, Jan-Fang, Goodwin, Lynne, Tapia, Roxanne, Pitluck, Sam, Liolios, Konstantinos, Ivanova, Natalia, Mavromatis, Konstantinos, Mikhailova, Natalia, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Brambilla, Evelyne, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Brettin, Thomas, Detter, John C., Han, Cliff, Rohde, Manfred ... Klenk, Hans-Peter (2010). Complete genome sequence of Ignisphaera aggregans type strain (AQ1.S1(T)). Standards in Genomic Sciences, 3 (1), 66-75. doi: 10.4056/sigs.1072907 |
