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2019

Journal Article

Genotype-by-environment interactions inferred from genetic effects on phenotypic variability in the UK Biobank

Wang, Huanwei, Zhang, Futao, Zeng, Jian, Wu, Yang, Kemper, Kathryn E., Xue, Angli, Zhang, Min, Powell, Joseph E., Goddard, Michael E., Wray, Naomi R., Visscher, Peter M., McRae, Allan F. and Yang, Jian (2019). Genotype-by-environment interactions inferred from genetic effects on phenotypic variability in the UK Biobank. Science Advances, 5 (8) eaaw3538, 1-12. doi: 10.1126/sciadv.aaw3538

Genotype-by-environment interactions inferred from genetic effects on phenotypic variability in the UK Biobank

2019

Journal Article

The effect of X-linked dosage compensation on complex trait variation

Sidorenko, Julia, Kassam, Irfahan, Kemper, Kathryn E., Zeng, Jian, Lloyd-Jones, Luke R., Montgomery, Grant W., Gibson, Greg, Metspalu, Andres, Esko, Tonu, Yang, Jian, McRae, Allan F. and Visscher, Peter M. (2019). The effect of X-linked dosage compensation on complex trait variation. Nature Communications, 10 (1) 3009, 3009. doi: 10.1038/s41467-019-10598-y

The effect of X-linked dosage compensation on complex trait variation

2018

Journal Article

Identifying gene targets for brain-related traits using transcriptomic and methylomic data from blood

Qi, Ting, Wu, Yang, Zeng, Jian, Zhang, Futao, Xue, Angli, Jiang, Longda, Zhu, Zhihong, Kemper, Kathryn, Yengo, Loic, Zheng, Zhili, eQTLGen Consortium, Marioni, Riccardo E., Montgomery, Grant W., Deary, Ian J., Wray, Naomi R., Visscher, Peter M., McRae, Allan F. and Yang, Jian (2018). Identifying gene targets for brain-related traits using transcriptomic and methylomic data from blood. Nature Communications, 9 (1) 2282, 2282. doi: 10.1038/s41467-018-04558-1

Identifying gene targets for brain-related traits using transcriptomic and methylomic data from blood

2018

Journal Article

Global genetic differentiation of complex traits shaped by natural selection in humans

Guo, Jing, Wu, Yang, Zhu, Zhihong, Zheng, Zhili, Trzaskowski, Maciej, Zeng, Jian, Robinson, Matthew R., Visscher, Peter M. and Yang, Jian (2018). Global genetic differentiation of complex traits shaped by natural selection in humans. Nature Communications, 9 (1) 1865, 1865. doi: 10.1038/s41467-018-04191-y

Global genetic differentiation of complex traits shaped by natural selection in humans

2018

Journal Article

A nested mixture model for genomic prediction using whole-genome SNP genotypes

Zeng, Jian, Garrick, Dorian, Dekkers, Jack and Fernando, Rohan (2018). A nested mixture model for genomic prediction using whole-genome SNP genotypes. PloS one, 13 (3) e0194683, e0194683. doi: 10.1371/journal.pone.0194683

A nested mixture model for genomic prediction using whole-genome SNP genotypes

2018

Journal Article

Genomic prediction from multiple-trait bayesian regression methods using mixture priors

Cheng, Hao, Kizilkaya, Kadir, Zeng, Jian, Garrick, Dorian and Fernando, Rohan (2018). Genomic prediction from multiple-trait bayesian regression methods using mixture priors. Genetics, 209 (1), 89-103. doi: 10.1534/genetics.118.300650

Genomic prediction from multiple-trait bayesian regression methods using mixture priors

2017

Journal Article

Concepts, estimation and interpretation of SNP-based heritability

Yang, Jian, Zeng, Jian, Goddard, Michael E., Wray, Naomi R. and Visscher, Peter M. (2017). Concepts, estimation and interpretation of SNP-based heritability. Nature Genetics, 49 (9), 1304-1310. doi: 10.1038/ng.3941

Concepts, estimation and interpretation of SNP-based heritability

2017

Journal Article

Inference on the genetic basis of eye and skin color in an admixed population via Bayesian linear mixed models

Lloyd-Jones, Luke R., Robinson, Matthew R., Moser, Gerhard, Zeng, Jian, Beleza, Sandra, Barsh, Gregory S., Tang, Hua and Visscher, Peter M. (2017). Inference on the genetic basis of eye and skin color in an admixed population via Bayesian linear mixed models. Genetics, 206 (2), 1113-1126. doi: 10.1534/genetics.116.193383

Inference on the genetic basis of eye and skin color in an admixed population via Bayesian linear mixed models

2016

Journal Article

Impact of fitting dominance and additive effects on accuracy of genomic prediction of breeding values in layers

Heidaritabar, M., Wolc, A., Arango, J., Zeng, J., Settar, P., Fulton, J. E., O'Sullivan, N. P., Bastiaansen, J. W. M., Fernando, R. L., Garrick, D. J. and Dekkers, J. C. M. (2016). Impact of fitting dominance and additive effects on accuracy of genomic prediction of breeding values in layers. Journal of Animal Breeding and Genetics, 133 (5), 334-346. doi: 10.1111/jbg.12225

Impact of fitting dominance and additive effects on accuracy of genomic prediction of breeding values in layers

2016

Journal Article

Genetic and clinical analysis of spinocerebellar ataxia type 36 in Mainland China

Zeng, S., Zeng, J., He, M., Zeng, X., Zhou, Y., Liu, Z., Xia, K., Pan, Q., Jiang, H., Shen, L., Yan, X., Tang, B. and Wang, J. (2016). Genetic and clinical analysis of spinocerebellar ataxia type 36 in Mainland China. Clinical Genetics, 90 (2), 141-148. doi: 10.1111/cge.12706

Genetic and clinical analysis of spinocerebellar ataxia type 36 in Mainland China

2016

Journal Article

A nested mixture model for genomic prediction using whole-genome SNP genotypes

Zeng, Jian, Garrick, Dorian J., Dekkers, Jack C. and Fernando, Rohan L (2016). A nested mixture model for genomic prediction using whole-genome SNP genotypes. Iowa State University Animal Industry Report, 13 (1). doi: 10.31274/ans_air-180814-452

A nested mixture model for genomic prediction using whole-genome SNP genotypes

2013

Journal Article

Dissecting the genetic architecture of frost tolerance in Central European winter wheat

Zhao, Yusheng, Gowda, Manje, Wuerschum, Tobias, Longin, C. Friedrich H., Korzun, Viktor, Kollers, Sonja, Schachschneider, Ralf, Zeng, Jian, Fernando, Rohan, Dubcovsky, Jorge and Reif, Jochen C. (2013). Dissecting the genetic architecture of frost tolerance in Central European winter wheat. Journal of Experimental Botany, 64 (14), 4453-4460. doi: 10.1093/jxb/ert259

Dissecting the genetic architecture of frost tolerance in Central European winter wheat

2013

Journal Article

Genomic selection of purebred animals for crossbred performance in the presence of dominant gene action

Zeng, Jian, Toosi, Ali, Fernando, Rohan L., Dekkers, Jack C. M. and Garrick, Dorian J. (2013). Genomic selection of purebred animals for crossbred performance in the presence of dominant gene action. Genetics Selection Evolution, 45 (1) 11. doi: 10.1186/1297-9686-45-11

Genomic selection of purebred animals for crossbred performance in the presence of dominant gene action

2013

Journal Article

Genomic prediction of hybrid wheat performance

Zhao, Yusheng, Zeng, Jian, Fernando, Rohan and Reif, Jochen C. (2013). Genomic prediction of hybrid wheat performance. Crop Science, 53 (3), 802-810. doi: 10.2135/cropsci2012.08.0463

Genomic prediction of hybrid wheat performance

2012

Journal Article

Genomic breeding value prediction and QTL mapping of QTLMAS2011 data using Bayesian and GBLUP methods

Zeng, Jian, Pszczola, Marcin, Wolc, Anna, Strabel, Tomasz, Fernando, Rohan L., Garrick, Dorian J. and Dekkers, Jack C. M. (2012). Genomic breeding value prediction and QTL mapping of QTLMAS2011 data using Bayesian and GBLUP methods. BMC Proceedings, 6 (S2) S7. doi: 10.1186/1753-6561-6-S2-S7

Genomic breeding value prediction and QTL mapping of QTLMAS2011 data using Bayesian and GBLUP methods