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2025

Conference Publication

Assessing seed-source effects on bread wheat seedling root architecture with a high-throughput paper-pouch system

Zhao, Zizhu, Singh, Vijaya and Arief, Vivi (2025). Assessing seed-source effects on bread wheat seedling root architecture with a high-throughput paper-pouch system. International Horticulture Research Conference, Sanya, China, 9-12 October 2025.

Assessing seed-source effects on bread wheat seedling root architecture with a high-throughput paper-pouch system

2025

Conference Publication

Evaluate water use efficiency in Mungbean (Vigna radiata (L.)): genotypic variation and phenotyping approaches

Zhong, Yayue, Singh, Vijaya, Dieters, Mark, Basford, Kaye, Chauhan, Yash, Hunter, Malcolm and Arief, Vivi (2025). Evaluate water use efficiency in Mungbean (Vigna radiata (L.)): genotypic variation and phenotyping approaches. International Horticulture Research Conference, Sanya, China, 9 - 12 October 2025.

Evaluate water use efficiency in Mungbean (Vigna radiata (L.)): genotypic variation and phenotyping approaches

2025

Journal Article

Selecting superior genotypes to enhance yield and fruit quality in Australian passion fruit

Sun, Xinhang, Arief, Vivi, Gauthier, Paul, Dhakal Poudel, Pragya, Mason, Patrick, Varshney, Rajeev, Topp, Bruce and Alam, Mobashwer (2025). Selecting superior genotypes to enhance yield and fruit quality in Australian passion fruit. Scientia Horticulturae, 351 114411, 1-9. doi: 10.1016/j.scienta.2025.114411

Selecting superior genotypes to enhance yield and fruit quality in Australian passion fruit

2025

Conference Publication

Evaluation of seedling root architecture in bread wheat varieties

Zhao, Zizhu, Dieters, Mark, Singh, Vijaya, Lei, Yeming and Arief, Vivi (2025). Evaluation of seedling root architecture in bread wheat varieties. 17th Australasian Plant Breeding Conference, Fremantle, WA, Australia, 4 - 6 June 2025.

Evaluation of seedling root architecture in bread wheat varieties

2025

Conference Publication

Genotypic variability in water use efficiency of Australian mungbean accessions

Zhong, Yayue, Singh, Vijaya, Dieters, Mark, Basford, Kaye, Chauhan, Yash, Hunter, Malcolm and Arief, Vivi (2025). Genotypic variability in water use efficiency of Australian mungbean accessions. 17th Australasian Plant Breeding Conference, Fremantle, WA, Australia, 4 - 6 June 2025.

Genotypic variability in water use efficiency of Australian mungbean accessions

2025

Conference Publication

Accelerating passionfruit breeding: a strategic path to industry profitability and resilience

Sun, Xinhang, Mason, Patrick, Fulara, Khushboo, Arief, Vivi, Gauthier, Paul, Varshney, Rajeev, Topp, Bruce and Alam, Mobashwer (2025). Accelerating passionfruit breeding: a strategic path to industry profitability and resilience. 17th Australasian Plant Breeding Conference, Fremantle, WA, Australia, 4-6 June 2025.

Accelerating passionfruit breeding: a strategic path to industry profitability and resilience

2025

Conference Publication

The cimmyt Australia icarda evaluation contribution to identify adapted high-yielding wheat lines with genetic resistance to multiple pathogens of economic importance to the australian grain growing regions

Ruiz Espinosa, Laura I., Nicol, Julie M., Singh, Amit K., Dieters, Mark, Park, Robert, Singh, Davinder, Ziems, Laura, Shankar, Manisha, Milgate, Andrew, Hollaway, Grant J., Cook, Melissa J., Dadu, Hari, Sheedy, Jason, Garrard, Tara, Wallwork, Hugh, Snyman, Lisle, Dreisigacker, Susanne, Govindan, Velu, Singh, Ravi P., Dababat, Abdelfattah A., Tadesse, Wuletaw, Norton, Sally, Fradgley, Nick, Arief, Vivi, Wilson, Robin and Trethowan, Richard (2025). The cimmyt Australia icarda evaluation contribution to identify adapted high-yielding wheat lines with genetic resistance to multiple pathogens of economic importance to the australian grain growing regions. 25th Australasian Plant Pathology Society Conference (APPS 2025), Sydney, NSW, Australia, 26 - 28 May 2025.

The cimmyt Australia icarda evaluation contribution to identify adapted high-yielding wheat lines with genetic resistance to multiple pathogens of economic importance to the australian grain growing regions

2025

Conference Publication

Identifying tissue-level markers for thin melanoma survival via model-based clustering of spatial omics data

Zhang, Min, Arief, Vivi, McLachlan, Geoffrey, Nguyen, Quan and Basford, Kaye (2025). Identifying tissue-level markers for thin melanoma survival via model-based clustering of spatial omics data. Stat4Onc Symposium, Stanford, CA, United States, 16-17 May 2025.

Identifying tissue-level markers for thin melanoma survival via model-based clustering of spatial omics data

2024

Conference Publication

Statistical analysis of cellular-level markers from the deconvolution of melanoma bulk transcriptomic data

Zhang, Min, Arief, Vivi, McLachlan, Geoffrey, Nguyen, Quan and Basford, Kaye (2024). Statistical analysis of cellular-level markers from the deconvolution of melanoma bulk transcriptomic data. International Biometrics Society Conference (IBC), Atlanta, GA United States, 8-13 December 2024.

Statistical analysis of cellular-level markers from the deconvolution of melanoma bulk transcriptomic data

2024

Conference Publication

Multivariate characterisation of envirotypes for wheat G×E in Australian Variety Trials

Fernandez, Javier A., Hu, Pengcheng, Arief, Vivi, Gho, Carla, Ramakers, Jip, Hemerik, Jesse, Boer, Martin, van Eeuwijk, Fred and Chapman, Scott (2024). Multivariate characterisation of envirotypes for wheat G×E in Australian Variety Trials. GxExM Symposium III, Wageningen, Netherlands, 30-31 October 2024.

Multivariate characterisation of envirotypes for wheat G×E in Australian Variety Trials

2024

Journal Article

Evaluation of Water Use Efficiency in Mungbean using the Inverted-Bottle Pot System

Zhong, Yayue, Singh, Vijaya, Dieters, Mark, Basford, Kaye, Chauhan, Yash, Hunter, Malcolm and Arief, Vivi (2024). Evaluation of Water Use Efficiency in Mungbean using the Inverted-Bottle Pot System. Crop Breeding, Genetics and Genomics, 6 (4) e240007.

Evaluation of Water Use Efficiency in Mungbean using the Inverted-Bottle Pot System

2024

Conference Publication

Environment characterisation of wheat national variety trials in Australia

Fernandez, Javier A., Arief, Vivi, Hu, Pengcheng, Zheng, Bangyou, Gho, Carla, Ramakers, Jip, Boer, Martin, van Eeuwijk, Fred and Chapman, Scott (2024). Environment characterisation of wheat national variety trials in Australia. 3rd International Wheat Congress, Perth, WA, Australia, 22-27 September 2024.

Environment characterisation of wheat national variety trials in Australia

2024

Journal Article

Simulations of multiple breeding strategy scenarios in common bean for assessing genomic selection accuracy and model updating

Chiaravallotti, Isabella, Lin, Jennifer, Arief, Vivi, Jahufer, Zulfi, Osorno, Juan M., McClean, Phil, Jarquin, Diego and Hoyos-Villegas, Valerio (2024). Simulations of multiple breeding strategy scenarios in common bean for assessing genomic selection accuracy and model updating. Plant Genome, 17 (1) e20388, e20388. doi: 10.1002/tpg2.20388

Simulations of multiple breeding strategy scenarios in common bean for assessing genomic selection accuracy and model updating

2024

Conference Publication

Evaluating water use efficiency and shoot-root traits in Australian mungbean cultivars under different levels of water availability

Zhong, Yayue, Singh, Vijaya, Dieters, Mark, Basford, Kaye, Chauhan, Yash, Hunter, Malcolm and Arief, Vivi (2024). Evaluating water use efficiency and shoot-root traits in Australian mungbean cultivars under different levels of water availability. 11th International Conference on Legume Genetics and Genomics (ICLGG), Brisbane, QLD Australia, 30 September - 3 October 2024.

Evaluating water use efficiency and shoot-root traits in Australian mungbean cultivars under different levels of water availability

2023

Conference Publication

Predicting yield in multi-environment breeding trials using penalized regression and multiple-covariate random-regression models

Ramakers, Jip, Hemerik, Jesse, Boer, Martin, Bustos-Korts, Daniela, Fernandez, Javier A., Pengcheng Hu, Noviati, Vivi, Chapman, Scott and van Eeuwijk, Fred (2023). Predicting yield in multi-environment breeding trials using penalized regression and multiple-covariate random-regression models. Channel Network Conference 2023, Wageningen, Netherlands, 23-25 August 2023.

Predicting yield in multi-environment breeding trials using penalized regression and multiple-covariate random-regression models

2023

Conference Publication

Environment characterisation of sorghum GxE in Australia: Integrating APSIM and satellite imagery in NVT case study

Fernandez, Javier A., Garba, Ismail, Hu, Pengcheng, Segura Pinzon, Camilo, Arief, Vivi, Gho, Carla, Ramakers, Jip, Hemerik, Jesse, Zheng, Bangyou, van Eeuwijk, Fred and Chapman, Scott C. (2023). Environment characterisation of sorghum GxE in Australia: Integrating APSIM and satellite imagery in NVT case study. AuSoRGM, Toowoomba, QLD, Australia, 8-9 August 2023.

Environment characterisation of sorghum GxE in Australia: Integrating APSIM and satellite imagery in NVT case study

2023

Conference Publication

Environment characterisation of sorghum (Sorghum bicolor L.) crops using climate, satellite imagery, and crop simulation modelling in Australia

Javier A. Fernandez, Hu, Pengcheng, Chen, Zhi, Gho Brito, Carla, Segura Pinzon, Camilo, Chen, Qiaomin, Smith, Daniel, Arief, Vivi, Zheng, Bangyou, Potgieter, Andries, Zhao, Yan, Ramakers, Jip, Hemerik, Jesse, van Eeuwijk, Fred and Chapman, Scott C. (2023). Environment characterisation of sorghum (Sorghum bicolor L.) crops using climate, satellite imagery, and crop simulation modelling in Australia. Global Sorghum Conference, Montpellier, France, 5-9 June 2023.

Environment characterisation of sorghum (Sorghum bicolor L.) crops using climate, satellite imagery, and crop simulation modelling in Australia

2023

Journal Article

Simulations of rate of genetic gain in dry bean breeding programs

Lin, Jennifer, Arief, Vivi, Jahufer, Zulfi, Osorno, Juan, McClean, Phil, Jarquin, Diego and Hoyos-Villegas, Valerio (2023). Simulations of rate of genetic gain in dry bean breeding programs. Theoretical and Applied Genetics, 136 (1) 14, 1-22. doi: 10.1007/s00122-023-04244-x

Simulations of rate of genetic gain in dry bean breeding programs

2023

Journal Article

The application of Fourier Transform Infra-Red spectrometry to assess the impact of changes in photosynthetic photon flux on cell wall components and turf quality of different cultivars of Cynodon grasses

Brown, Christopher W., Jie, Marcus Wee Qi, Pearce, William, Arief, Vivi, Dayananda, Buddhi, Lambrides, Christopher J. and Grof, Christopher P. L. (2023). The application of Fourier Transform Infra-Red spectrometry to assess the impact of changes in photosynthetic photon flux on cell wall components and turf quality of different cultivars of Cynodon grasses. Grass Research, 3 (9) 9. doi: 10.48130/gr-2023-0009

The application of Fourier Transform Infra-Red spectrometry to assess the impact of changes in photosynthetic photon flux on cell wall components and turf quality of different cultivars of Cynodon grasses

2023

Conference Publication

Using cellular composition estimated from bulk RNA-seq data to suggest cellular level markers for melanoma survival

Zhang, Min, Basford, Kaye, Arief, Vivi, McLachlan, Geoff and Nguyen, Quan (2023). Using cellular composition estimated from bulk RNA-seq data to suggest cellular level markers for melanoma survival. IBS-AR/SEEM Conference, Bay of Islands, Aotearoa, New Zealand, 27 November - 1 December 2023.

Using cellular composition estimated from bulk RNA-seq data to suggest cellular level markers for melanoma survival