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2010

Journal Article

Prediction of genetic values of quantitative traits in plant breeding using pedigree and molecular markers

Crossa, J, de los Campos, G, Perez, P, Gianola, D, Burgueno, J, Araus, JL, Makumbi, D, Singh, RP, Dreisigacker, S, Yan, JB, Arief, V, Banziger, M and Braun, HJ (2010). Prediction of genetic values of quantitative traits in plant breeding using pedigree and molecular markers. Genetics, 186 (2), 713-724. doi: 10.1534/genetics.110.118521

Prediction of genetic values of quantitative traits in plant breeding using pedigree and molecular markers

2010

Journal Article

Genetic gain in yield and protein over two cycles of a wheat recurrent selection program

Niu, Na, Arief, Vivi N., DeLacy, Ian H., Lush, Douglas, Sheppard, John, Zhang, Gaisheng and Dieters, Mark J. (2010). Genetic gain in yield and protein over two cycles of a wheat recurrent selection program. Breeding Science, 60 (3), 181-186. doi: 10.1270/jsbbs.60.181

Genetic gain in yield and protein over two cycles of a wheat recurrent selection program

2010

Other Outputs

Methodology Development to Integrate Phenotypic and Genotypic Data from a Plant Breeding Program through Association Analysis with a Case Study Using Data from the CIMMYT International Spring Wheat Field Trials

Vivi Arief (2010). Methodology Development to Integrate Phenotypic and Genotypic Data from a Plant Breeding Program through Association Analysis with a Case Study Using Data from the CIMMYT International Spring Wheat Field Trials. PhD Thesis, School of Agriculture and Food Sciences, The University of Queensland.

Methodology Development to Integrate Phenotypic and Genotypic Data from a Plant Breeding Program through Association Analysis with a Case Study Using Data from the CIMMYT International Spring Wheat Field Trials

2010

Conference Publication

Three-way ordination of rust GWAS using 25 years of one of CIMMYT global wheat breeding programs

Arief, Vivi N., Kroonenberg, Pieter M., DeLacy, Ian H., Dieters, Mark J., Crossa, Jose, Dreisigacker, Susanne, Braun, Hans-J. and Basford, Kaye E. (2010). Three-way ordination of rust GWAS using 25 years of one of CIMMYT global wheat breeding programs. Borlaug Global Rust Initiative 2010 Technical Workshops, St. Petersburg, Russia, 30-31 May 2010.

Three-way ordination of rust GWAS using 25 years of one of CIMMYT global wheat breeding programs

2010

Conference Publication

Construction and three-way ordination of the Wheat Phenome Atlas

Arief, V. N., Kroonenberg, P. M., DeLacy, I. H., Dieters, M. J., Crossa, J. and Basford, K. E. (2010). Construction and three-way ordination of the Wheat Phenome Atlas. Tenth Islamic Countries Conference on Statistical Sciences (ICCS-X), Cairo, Egypt, 20-23 December 2010. Lahor, Pakistan: The Islamic Countries Society of Statistical Sciences (ISOSS).

Construction and three-way ordination of the Wheat Phenome Atlas

2010

Conference Publication

The use of pedigree, molecular marker and phenotypic data to investigate population structures in 25 years of the CIMMYT global wheat breeding program

Arief, Vivi N., DeLacy, Ian H., Crossa, Jose, Dieters, Mark J. and Basford, Kaye E. (2010). The use of pedigree, molecular marker and phenotypic data to investigate population structures in 25 years of the CIMMYT global wheat breeding program. Eighth International Wheat Conference, St Petersburg, Russia, 1 - 4 June 2010. St. Petersburg, Russia: Vavilov Research Institute of Plant Industry.

The use of pedigree, molecular marker and phenotypic data to investigate population structures in 25 years of the CIMMYT global wheat breeding program

2010

Journal Article

Construction and three-way ordination of the Wheat Phenome Atlas

Arief, V. N., Kroonenberg, P. M., DeLacy, I. H., Dieters, M. J., Crossa, J., Dreisigacker, S., Braun, H. -J. and Basford, K. E. (2010). Construction and three-way ordination of the Wheat Phenome Atlas. Journal of Applied Probability and Statistics, 5 (1), 95-118.

Construction and three-way ordination of the Wheat Phenome Atlas

2010

Conference Publication

The use of pedigree, molecular marker and phenotypic data to investigate population structures in 25 years of the CIMMYT global wheat breeding program

Arief, Vivi N., DeLacy, Ian H., Crossa, Jose, Dieters, Mark J. and Basford, Kaye E. (2010). The use of pedigree, molecular marker and phenotypic data to investigate population structures in 25 years of the CIMMYT global wheat breeding program. 8th International Wheat Conference, St. Petersburg, Russia, 1-4 June 2010. St. Petersburg, Russia: N.I. Vavilov Research Institute of Plant Industry (VIR).

The use of pedigree, molecular marker and phenotypic data to investigate population structures in 25 years of the CIMMYT global wheat breeding program

2010

Conference Publication

Association mapping of rust resistance in pre-green revolution wheat accessions

Bansal, Urmil K., Arief, Vivi, Miah, Hanif, DeLacy, Ian H. and Bariana, Harbans S. (2010). Association mapping of rust resistance in pre-green revolution wheat accessions. Borlaug Global Rust Initiative 2010 Technical Workshops, St. Petersburg, Russia, 30-31 May 2010.

Association mapping of rust resistance in pre-green revolution wheat accessions

2009

Conference Publication

Genetic disequilibrium mapping using high-throughput data from a plant breeding program

V.N. Arief, I.H. Delacy, P. Wenzl and M.J. Dieters (2009). Genetic disequilibrium mapping using high-throughput data from a plant breeding program. 14th Australasian Plant Breeding Conference and 11th SABRAO, Cairns, Australia, 14-18 August 2009. Bangkok, Thailand: Society for the Advancement of Breeding Researches in Asia and Oceania.

Genetic disequilibrium mapping using high-throughput data from a plant breeding program

2009

Conference Publication

Characterization of commercial cultivars and naturalized genotypes of Stenotaphrum secundatum (Walter) Kuntze in Australia

Loch, Donald S., Roche, Matthew B., Sun-Yue, Jenny, Arief, Vivi N., Delacy, Ian H. and Lambrides, Christopher J. (2009). Characterization of commercial cultivars and naturalized genotypes of Stenotaphrum secundatum (Walter) Kuntze in Australia. 11th ITRC: 2009 International Turfgrass Research Conference, Santiago, Chile, 26-31 July 2009. Overland Park, KS, U.S.A.: Intertec Publishing.

Characterization of commercial cultivars and naturalized genotypes of Stenotaphrum secundatum (Walter) Kuntze in Australia

2009

Conference Publication

An application of wheat phenome atlas using three-way principal component analysis

Arief, Vivi N., Kroonenberg, Pieter M., DeLacy, Ian H., Dieters, Mark J., Crossa, Jose and Basford, Kaye E. (2009). An application of wheat phenome atlas using three-way principal component analysis. OECD Genome Association Oz09, Perth, Australia, 9-12 November 2009.

An application of wheat phenome atlas using three-way principal component analysis

2009

Conference Publication

Ordination of marker-trait association profiles from long-term international wheat trials

Arief, V. N., Delacy, I. H., Crossa, J., Kroonenberg, P. M., Dieters, M. J. and Basford, K. E. (2009). Ordination of marker-trait association profiles from long-term international wheat trials. Biometrics 2009: Biometrics on the Lake. The International Biometric Society Australasian Region Conference, Taupo, New Zealand, 29 November-3 December 2009. International Biometric Society Australasian Region (IBS AR).

Ordination of marker-trait association profiles from long-term international wheat trials

2009

Conference Publication

Pattern analysis of marker-trait association profiles derived from 25 years of international wheat performance trials

Arief, V. N., Delacy, I. H., Dieters, M. J., Crossa, J., Dreisigacker, S. and Basford, K. E. (2009). Pattern analysis of marker-trait association profiles derived from 25 years of international wheat performance trials. 14th Australasian Plant Breeding Conference (APBC) and the 11th Congress of the Society for the Advancement of Breeding Research in Asia and Oceania (SABRAO). Contemporary Crop Improvement: A Tropical View, Cairns, Australia, 10-14 August 2009. Bangkok, Thailand: Society for Advancement of Breeding Research in Asia and Oceania.

Pattern analysis of marker-trait association profiles derived from 25 years of international wheat performance trials

2009

Conference Publication

Genetic gain in yield and protein over two cycles of recurrent selection program

Niu, N., Arief, V. N., Delacy, I. H., Lush, D., Dieters, M. J. and Zhang, G. S. (2009). Genetic gain in yield and protein over two cycles of recurrent selection program. 14th Australasian Plant Breeding and 11th SABRAO Conference, Cairns, Australia, 10–14 August 2009. Bangkok, Thailand: Society for the Advancement of Breeding Researches in Asia and Oceania.

Genetic gain in yield and protein over two cycles of recurrent selection program

2008

Conference Publication

Developing the wheat phenome atlas: Integrating 25 years of international wheat phenotypic data with genome analysis

Godwin, Ian D., DeLacy, Ian H., Arief, Vivi N., Dieters, Mark J., Lambrides, Christopher J., Basford, Kaye E., Crossa, Jose, Dreisigacker, Susanne, Kilian, Andrzej, Huttner, Eric, Crouch, Jonathan and McLaren, Graham (2008). Developing the wheat phenome atlas: Integrating 25 years of international wheat phenotypic data with genome analysis. 5th International Crop Science Conferences, Jeju, South Korea, 13-18 April, 2008.

Developing the wheat phenome atlas: Integrating 25 years of international wheat phenotypic data with genome analysis

2008

Conference Publication

Association between phenotype and DArT markers in spring wheat using 25 years Of CIMMYT international field trial data

Arief, Vivi N., DeLacy, Ian H., Dieters, Mark J., Crossa, Jose, Godwin, Ian, Batley, Jacqueline, Davenport, Guy, Dreisiqacker, Susane, Edwards, Dave, Huttner, Eric, Lambrides, Christopher, Manes, Yan, Payne, Thomas, Singh, Ravi P., Warburton, Marilyn, Wenzl, Peter, Williams, Manila, Kilian, Andrezj, McLaren, Graham, Crouch, Jonathan and Basford, Kaye E. (2008). Association between phenotype and DArT markers in spring wheat using 25 years Of CIMMYT international field trial data. Plant & Animal Genomes XVI Conference, San Diego, USA, 12-16 January 2008.

Association between phenotype and DArT markers in spring wheat using 25 years Of CIMMYT international field trial data

2008

Conference Publication

Marker/trait associations identified in spring wheat using 25 years of CIMMYT International Trials

Arief, Vivi N., DeLacy, Ian H., Dieters, Mark J., Crossa, Jose, Godwin, Ian D., Batley, Jacqueline, Davenport, Guy, Dreisigacker, Susanne, Duvieller, Etienne, Edwards, D., Huttner, E., Lambrides, C., Manes, Y., Payne, T., Singh, R. P., Warburton, Marilyn, Wenzl, Peter, Kilian, Andrzej, McLaren, Graham, Braun, Hans-J., Crouch, Jonathan, Ortiz, Rodomiro and Basford, Kaye E. (2008). Marker/trait associations identified in spring wheat using 25 years of CIMMYT International Trials. 11th International Wheat Genetics Symposium, Brisbane, QLD Australia, 24-29 August 2008. Sydney, NSW Australia: Sydney University Press.

Marker/trait associations identified in spring wheat using 25 years of CIMMYT International Trials

2008

Conference Publication

A comparison of three genotype structures for 686 lines derived from pedigrees (COP), 1400 DArT markers and 420,000 data points from 25 Years of CIMMYT international bread wheat trials

DeLacy, Ian H., Arief, Vivi N., Dieters, Mark J., Crossa, Jose, Godwin, Ian, Batley, Jacqueline, Davenport, Guy, Dreisiqacker, Susane, Edwards, Dave, Huttner, Eric, Lambrides, Christopher, Manes, Yan, Payne, Thomas, Singh, Ravi P., Warburton, Marilyn, Wenzl, Peter, William, Manilal, Kilian, Andrzej, McLaren, Graham, Crouch, Jonathan and Basford, Kaye E. (2008). A comparison of three genotype structures for 686 lines derived from pedigrees (COP), 1400 DArT markers and 420,000 data points from 25 Years of CIMMYT international bread wheat trials. Plant and Animal Genome XVI Conference, San Diego, CA, U.S.A., 12-16 January 2008.

A comparison of three genotype structures for 686 lines derived from pedigrees (COP), 1400 DArT markers and 420,000 data points from 25 Years of CIMMYT international bread wheat trials

2008

Conference Publication

Patterns of linkage disequilibrium in multiple populations

Dreisigacker, S., Arief, V. N., DeLacy, I. H., Davenport, G., Manes, Y., Reynolds, M. P., Singh, R. P., Dieters, M. J. and Crossa, J. (2008). Patterns of linkage disequilibrium in multiple populations. 11th International Wheat Genetics Symposium, Brisbane, Queensland, 24-29 August, 2008. Sydney, Australia: Sydney University Press.

Patterns of linkage disequilibrium in multiple populations