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2026 Journal Article Structured cap-assisted margin assessment reduces residual neoplasia after colorectal polypectomy: a prospective multicentre proof-of-concept studyHuelsen, Alexander, Willis, Timothy, Ketheson, Prabha, Cooper, Caroline, Borowsky, Jennifer, Pillay, Sooraj, Hughes, Ian Paul and Hamarneh, Zaki (2026). Structured cap-assisted margin assessment reduces residual neoplasia after colorectal polypectomy: a prospective multicentre proof-of-concept study. Endoscopy International Open, 14 (CP) a29001290, 1-11. doi: 10.1055/a-2900-1290 |
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2026 Journal Article The Asian pacific association of the study of the liver expert survey on artificial intelligence-assisted reporting of liver histopathology in metabolic dysfunction associated fatty liver diseaseElangovan, H., Akbary, K., Rastogi, A., Wee, A., Soon, G., Adams, L., Carr-Boyd, E., Clouston, A., Cooper, C. L., Chan, W. K., Dan, Y. Y., Dela-Cruz, R., Goh, G., Hamid, S. S., Huang, D. Q., Kawaguchi, T., Kim, W., Kim, S. U., Jia, J. D., Liu, C. J., Liu, F., Leow, W. Q., Muthiah, M. D., Ng, I., Payawal, D., Pan, A. F., Pervez, S., Shiha, G., Tanwandee, T. ... George, J. (2026). The Asian pacific association of the study of the liver expert survey on artificial intelligence-assisted reporting of liver histopathology in metabolic dysfunction associated fatty liver disease. Hepatology International, 20 (3), 539-549. doi: 10.1007/s12072-026-11092-6 |
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2026 Journal Article Utility of random neosquamous and cardia biopsy specimens during surveillance after dysplastic Barrett eradication: a prospective single-center studyYadav, Aman, Gupta, Sunil, Karim, Shwan, Banh, Xuan, Borowsky, Jennifer, Cooper, Caroline, Hughes, Ian, Hourigan, Luke F. and Huelsen, Alexander (2026). Utility of random neosquamous and cardia biopsy specimens during surveillance after dysplastic Barrett eradication: a prospective single-center study. Gastrointestinal Endoscopy, 103 (4), 700-708.e2. doi: 10.1016/j.gie.2025.08.033 |
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2026 Journal Article Radiotherapy for extramedullary haematopoiesis of the mandibular mucosa secondary to myelofibrosisSmith, Justin, Weatherburn, Claire, Kosciejew, Serena, Cooper, Caroline and Lee, Yoo Young (2026). Radiotherapy for extramedullary haematopoiesis of the mandibular mucosa secondary to myelofibrosis. BMJ Case Reports, 19 (2) e267107, e267107-1. doi: 10.1136/bcr-2025-267107 |
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2026 Journal Article SM3DD with segmented PCA: a comprehensive method for interpreting 3D spatial transcriptomicsBlick, Tony, Kilgallon, Aaron, Monkman, James, Cooper, Caroline, Tan, Chin Wee, Killingbeck, Emily E., Pan, Liuliu, Kim, Youngmi, Liang, Yan, Nam, Andy, Leon, Michael, Guimaraes, Paulo S. F., Nagashima, Seigo, Martins, Ana P. C., Machado-Souza, Cleber, de Noronha, Lucia, Fraser, John F., Belz, Gabrielle T., Souza-Fonseca-Guimaraes, Fernando and Kulasinghe, Arutha (2026). SM3DD with segmented PCA: a comprehensive method for interpreting 3D spatial transcriptomics. NAR Genomics and Bioinformatics, 8 (1) lqag007, 1-10. doi: 10.1093/nargab/lqag007 |
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2026 Journal Article International consensus recommendations and alignment of terminology for the histopathological diagnosis of extranodal extension in head and neck squamous cell carcinoma: an HN-CLEAR initiativeGupta, Ruta, Fielder, Timothy, Bal, Munita, Chiosea, Simion I., Dahlstrom, Jane E., Kakkar, Aanchal, Kiss, Katalin, Laco, Jan, Mittal, Neha, Pasricha, Sunil, Samra, Spinder, Zidar, Nina, Bullock, Martin, Chernock, Rebecca, Faquin, William, Richardson, Mary S., Hayes, D. Neil, Huang, Shao Hui, Yang, Jean, Alsugair, Ziyad, Benzerdjeb, Nazim, Chou, Shaun, Cooper, Caroline, Dimnik, Katarina, Dutta, Rimlee, Gomez, Ricardo Santiago, Hernandez-Prera, Juan C., Kamboj, Meenakshi, Agander, Tina Klitmøller ... Lewis, James S. (2026). International consensus recommendations and alignment of terminology for the histopathological diagnosis of extranodal extension in head and neck squamous cell carcinoma: an HN-CLEAR initiative. The Lancet Oncology, 27 (1), e33-e44. doi: 10.1016/s1470-2045(25)00535-2 |
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2025 Journal Article Making routine head and neck pathology easy: from dissection to diagnosisSiaw, Jasmine, Fielder, Timothy, Senff, Sebastian, Palme, Carsten E., Clark, Jonathan R., Cooper, Caroline L. and Gupta, Ruta (2025). Making routine head and neck pathology easy: from dissection to diagnosis. Human Pathology, 169 106030. doi: 10.1016/j.humpath.2025.106030 |
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2025 Journal Article Primary tracheal small cell carcinoma: a case report and discussion of its surgical and oncological managementChang, Shantel, Cooper, Caroline and Lo, Wingchi (2025). Primary tracheal small cell carcinoma: a case report and discussion of its surgical and oncological management. JTCVS Techniques, 34, 261-264. doi: 10.1016/j.xjtc.2025.09.001 |
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2025 Journal Article Response-adapted surgical and radiotherapy de-escalation in resectable cutaneous squamous cell cancer using pembrolizumab: the De-Squamate studyLadwa, Rahul, Lee, Jenny H., McGrath, Margaret, Cooper, Caroline, Liu, Howard, Bowman, James, Gupta, Ruta, Cuscaden, Claire, Nottage, Michelle, Clark, Jonathan R., Le, Dieu, Pauley, Marketa, Kulasinghe, Arutha, Gonzalez-Cruz, Jazmina, Porceddu, Sandro V., Hughes, Brett G.M. and Panizza, Benedict (2025). Response-adapted surgical and radiotherapy de-escalation in resectable cutaneous squamous cell cancer using pembrolizumab: the De-Squamate study. Journal of Clinical Oncology, 43 (26) JCO-25-00387, 2888-2896. doi: 10.1200/jco-25-00387 |
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2025 Journal Article Persistent Diarrhea: What Else Could It Be?Cheng, Sonia, Cooper, Caroline and Chao, Che-Yung (2025). Persistent Diarrhea: What Else Could It Be?. Gastroenterology, 169 (4), e1-e5. doi: 10.1053/j.gastro.2025.02.010 |
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2025 Journal Article Molecular testing of lung cancer in Australia: consensus best practice recommendations from the Royal College of Pathologists of Australasia in collaboration with the Thoracic Oncology Group of AustralasiaCooper, Wendy A., Amanuel, Benhur, Cooper, Caroline, Fox, Stephen B., Graftdyk, Jon W.A., Jessup, Peter, Klebe, Sonja, Lam, Wei-Sen, Y-M. Leong, Trishe, Lwin, Zarnie, Roberts-Thomson, Rachel, Solomon, Benjamin J., Tay, Rebecca Y., Trowman, Rebecca, Wale, Janney L. and Pavlakis, Nick (2025). Molecular testing of lung cancer in Australia: consensus best practice recommendations from the Royal College of Pathologists of Australasia in collaboration with the Thoracic Oncology Group of Australasia. Pathology, 57 (4), 425-436. doi: 10.1016/j.pathol.2025.02.001 |
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2025 Conference Publication Exploring PD1/PDL1 interactions and macrophage-tumor barriers in head and neck cancer: A spatial approach to immunotherapy responseNaei, Vahid Yaghoubi, Tubelleza, Rafael, Monkman, James, Sadeghirad, Habib, Donovan, Meg L., Blick, Tony, Wicher, Agata, Bodbin, Sara, Basu, Subham, Stad, Robert, Barnett, Catherine, O’Byrne, Ken, Ladwa, Rahul, Cooper, Caroline, Warkiani, Majid Ebrahimi, Hughes, Brett G.M. and Kulasinghe, Arutha (2025). Exploring PD1/PDL1 interactions and macrophage-tumor barriers in head and neck cancer: A spatial approach to immunotherapy response. AACR Annual Meeting 2025, Chicago, IL United States, 25-30 April 2025. Philadelphia, PA United States: American Association for Cancer Research. doi: 10.1158/1538-7445.am2025-750 |
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2025 Journal Article Spatial interaction mapping of PD-1/PD-L1 in head and neck cancer reveals the role of macrophage-tumour barriers associated with immunotherapy responseNaei, Vahid Yaghoubi, Tubelleza, Rafael, Monkman, James, Sadeghirad, Habib, Donovan, Meg L., Blick, Tony, Wicher, Agata, Bodbin, Sara, Viratham, Amelie, Stad, Robert, Basu, Subham, Cooper, Caroline, Barnett, Catherine, O’Byrne, Ken, Ladwa, Rahul, Warkiani, Majid Ebrahimi, Hughes, Brett G. M. and Kulasinghe, Arutha (2025). Spatial interaction mapping of PD-1/PD-L1 in head and neck cancer reveals the role of macrophage-tumour barriers associated with immunotherapy response. Journal of Translational Medicine, 23 (1) 177, 1-15. doi: 10.1186/s12967-025-06186-y |
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2025 Conference Publication Recommendations for molecular testing of lung cancer in Australia: consensus guidelines from the Royal College of Pathologists of Australasia and the Thoracic Oncology Group of AustralasiaCooper, Wendy A., Amanuel, Benhur, Cooper, Caroline, Fox, Stephen B., Graftdyk, Jon W.A., Jessup, Peter, Klebe, Sonja, Lam, Wei-Sen, Y-M. Leong, Trishe, Lwin, Zarnie, Roberts-Thomson, Rachel, Solomon, Benjamin J., Tay, Rebecca Y., Wale, Janney L. and Pavlakis, Nick (2025). Recommendations for molecular testing of lung cancer in Australia: consensus guidelines from the Royal College of Pathologists of Australasia and the Thoracic Oncology Group of Australasia. Pathology Update 2025, Melbourne, VIC Australia, 21-23 February 2025. Oxford, United Kingdom: Elsevier. doi: 10.1016/j.pathol.2024.12.013 |
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2025 Journal Article Validation of metallothionein immunohistochemistry as a highly sensitive screening test for Wilson diseaseStokes, Nadarra L., Patil, Ameya, Adeyi, Oyedele, Bhalla, Amarpreet, Brown, Ian, Byrnes, Kathleen, Calderaro, Julien, Chen, Diane, Chen, Wei, Cooper, Caroline, Dhall, Deepti, Frankel, Wendy, Gooch, Gretchen Galliano, Gonzalez, Raul S., Hammer, Suntrea, Hale, Gillian, Lagana, Stephen, McKenzie, Catriona, Allende, Daniela S., Moreira, Roger K., Nakhleh, Raouf, Nalbantoglu, ILKe, Pai, Rish K., Salomao, Marcela, Schaeffer, David F., Shih, Angela, Shin, Joo-Shik, Simoes, Camila C., Vij, Mukul ... Graham, Rondell P. (2025). Validation of metallothionein immunohistochemistry as a highly sensitive screening test for Wilson disease. Modern Pathology, 38 (1) 100628, 1-7. doi: 10.1016/j.modpat.2024.100628 |
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2024 Conference Publication Alterations In Local Oesophageal Microbiota And Outcomes After Oesophagectomy For Oesophago-gastric Cancer: A Pilot StudyStokes, Matthew, (Frank) Yu, Zirong, Schlebusch, Sanmarie, Jennison, Amy, Graham, Rikki, Cooper, Caroline, Smithers, B. Mark, Barbour, Andrew, Thomson, Iain and Frankel, Adam (2024). Alterations In Local Oesophageal Microbiota And Outcomes After Oesophagectomy For Oesophago-gastric Cancer: A Pilot Study. 20th ISDE World Congress for Esophageal Diseases, Edinburgh, United Kingdom, 22 - 24 September 2024. Cary, NC United States: Oxford University Press. doi: 10.1093/dote/doae057.006 |
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2024 Journal Article A phase Ib study to assess the safety of the human papillomavirus DNA vaccine (AMV002) in combination with durvalumab for HPV-associated oropharyngeal squamous cell carcinomaLadwa, Rahul, Chandra, Janin, Woo, Wai-Ping, Finlayson, Neil, Liu, Howard, McGrath, Margaret, See, Adrienne, Hughes, Brett G., Cooper, Caroline L., Jackson, Jim E., Dzienis, Marcin, Xu, Yan, Panizza, Benedict, Frazer, Ian and Porceddu, Sandro V. (2024). A phase Ib study to assess the safety of the human papillomavirus DNA vaccine (AMV002) in combination with durvalumab for HPV-associated oropharyngeal squamous cell carcinoma. Frontiers in Oncology, 14 1419258, 1-8. doi: 10.3389/fonc.2024.1419258 |
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2024 Journal Article Fibroblast activation protein (FAP) is overexpressed on both stromal and epithelial cells prior to pancreatic ductal adenocarcinoma: implications for early diagnosis on 68Ga-FAPI-PET/CTMcGahan, William, Gough, Madeline, Liu, Cheng, Hoyte, Sharon, Gill, Anthony J., Cavallucci, David, Australian Pancreatic Cancer Genome Initiative, Hooper, John D., Thomas, Paul A., Cooper, Caroline, O'Rourke, Thomas, Butler, Nick, Yeung, Shinn, Kryza, Thomas, Gulhane, Brook, Latter, Melissa J., Waddell, Nicola, Samra, Jaswinder S., Simpson, Fiona and Pajic, Marina (2024). Fibroblast activation protein (FAP) is overexpressed on both stromal and epithelial cells prior to pancreatic ductal adenocarcinoma: implications for early diagnosis on 68Ga-FAPI-PET/CT. Gastroenterology, 167 (6), 1217-1220. doi: 10.1053/j.gastro.2024.06.033 |
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2024 Conference Publication A phase 2 study of de-escalation in resectable, locally advanced cutaneous squamous cell carcinoma (cSCC) with the use of neoadjuvant pembrolizumab: De-SquamateLadwa, Rahul, Lee, Jenny H.J., Porceddu, Sandro V., McGrath, Margaret Louise, Cooper, Caroline, Liu, Howard, Gupta, Ruta, Cuscaden, Claire, Nottage, Michelle K., Clark, Jonathan, Le, Dieu, Pauley, Marketa, Gonzalez-Cruz, Jazmina, Frazer, Ian, Hughes, Brett Gordon Maxwell and Panizza, Benedict J. (2024). A phase 2 study of de-escalation in resectable, locally advanced cutaneous squamous cell carcinoma (cSCC) with the use of neoadjuvant pembrolizumab: De-Squamate. 2024 ASCO Annual Meeting, Chicago, IL United States, 31 May - 4 June 2024. Alexandria, VA United States: American Society of Clinical Oncology. doi: 10.1200/jco.2024.42.16_suppl.9514 |
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2024 Journal Article The 1000 Mitoses Project: a consensus-based international collaborative study on mitotic figures classificationLin, Sherman, Tran, Christopher, Bandari, Ela, Romagnoli, Tommaso, Li, Yueyang, Chu, Michael, Amirthakatesan, Abinaya S., Dallmann, Adam, Kostiukov, Andrii, Panizo, Angel, Hodgson, Anjelica, Laury, Anna R., Polonia, Antonio, Stueck, Ashley E., Menon, Aswathy A., Morini, Aurélien, Özamrak, Birsen, Cooper, Caroline, Trinidad, Celestine Marie G., Eisenlöffel, Christian, Suleiman, Dauda E., Suster, David, Dorward, David A., Aljufairi, Eman A., Maclean, Fiona, Gul, Gulen, Sansano, Irene, Erana-Rojas, Irma E., Machado, Isidro ... Cecchini, Matthew J. (2024). The 1000 Mitoses Project: a consensus-based international collaborative study on mitotic figures classification. International Journal of Surgical Pathology, 32 (8), 1449-1458. doi: 10.1177/10668969241234321 |
