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2026

Journal Article

Endogenous viral elements trace the ancient origins and early evolution of the <i>Caulimoviridae</i>

Vassilieff, Helena, Serfraz, Saad, Choisne, Nathalie, Geering, Andrew D. W., Lefeuvre, Pierre, Teycheney, Pierre-Yves and Maumus, Florian (2026). Endogenous viral elements trace the ancient origins and early evolution of the Caulimoviridae. Plos Pathogens, 22 (6) e1014340, e1014340-e1014340. doi: 10.1371/journal.ppat.1014340

Endogenous viral elements trace the ancient origins and early evolution of the <i>Caulimoviridae</i>

2026

Journal Article

Biological characterization of citrus viroid VII

Chambers, Grant, Geering, Andrew David William, Collins, Damian, Holford, Paul, Vidalakis, Georgios and Donovan, Nerida (2026). Biological characterization of citrus viroid VII. Plant Disease PDIS-03-26-0629-RE. doi: 10.1094/pdis-03-26-0629-re

Biological characterization of citrus viroid VII

2026

Other Outputs

Avocado industry biosecurity capacity and capability building: Phase II

Tran, Nga, Pretorius, Lara and Geering, Andrew (2026). Avocado industry biosecurity capacity and capability building: Phase II. Sydney, NSW, Australia: Hort Innovation Australia.

Avocado industry biosecurity capacity and capability building: Phase II

2026

Journal Article

History and evolution of the citrus budwood and seed scheme in Australia

Donovan, Nerida, Herrmann, Tim and Geering, Andrew David William (2026). History and evolution of the citrus budwood and seed scheme in Australia. Journal of Citrus Pathology, 13 (1). doi: 10.5070/c4.61329

History and evolution of the citrus budwood and seed scheme in Australia

2026

Other Outputs

Quantum-enabled detection of invasive pathogens for improved biosecurity

Tran, Nga and Geering, Andrew (2026). Quantum-enabled detection of invasive pathogens for improved biosecurity. Sydney, NSW, Australia: Australian Government.

Quantum-enabled detection of invasive pathogens for improved biosecurity

2026

Journal Article

Development of specific diagnostic assays for the eleven main viruses infecting garlic (Allium sativum)

Nurulita, S., Geering, A. D. W., Crew, K. S., Chao, H.-Y., Harper, S. and Thomas, J. E. (2026). Development of specific diagnostic assays for the eleven main viruses infecting garlic (Allium sativum). Australasian Plant Pathology, 55 (2) 27, 1-11. doi: 10.1007/s13313-026-01102-4

Development of specific diagnostic assays for the eleven main viruses infecting garlic (Allium sativum)

2026

Other Outputs

National diagnostic protocol: avocado sunblotch viroid

Pretorius, Lara, Tran, Nga and Geering, Andrew (2026). National diagnostic protocol: avocado sunblotch viroid. Sydney, NSW, Australia: Subcommittee on Plant Health Diagnostics.

National diagnostic protocol: avocado sunblotch viroid

2026

Journal Article

Complete genome sequence of citrus tristeza virus isolate PB61, a commercially deployed mild strain for cross-protection in grapefruit

Jackson, M. A., Kidanemariam, D. B., Chambers, G. A., Englezou, A., Geering, A. D.W. and Donovan, N. J. (2026). Complete genome sequence of citrus tristeza virus isolate PB61, a commercially deployed mild strain for cross-protection in grapefruit. Australasian Plant Pathology, 55 (1) 16, 1-5. doi: 10.1007/s13313-026-01113-1

Complete genome sequence of citrus tristeza virus isolate PB61, a commercially deployed mild strain for cross-protection in grapefruit

2026

Journal Article

The pandemic strain of the myrtle rust pathogen, Austropuccinia psidii, hosts multiple mycoviruses

Gardiner, Donald M., Fletcher, Stephen J., Sabburg, Rosalie, Geering, Andrew D. W., Smith, Grant R., Appukkuttan, Madhuja Palaparambil, Chang, Mu Sheen, Boufleur, Thaís R., Brosnan, Chris A. and Sawyer, Anne (2026). The pandemic strain of the myrtle rust pathogen, Austropuccinia psidii, hosts multiple mycoviruses. Fungal Biology, 130 (2) 101730, 101730. doi: 10.1016/j.funbio.2026.101730

The pandemic strain of the myrtle rust pathogen, Austropuccinia psidii, hosts multiple mycoviruses

2026

Other Outputs

National diagnostic protocol: avocado scab caused by Elsinoe perseae

Tran, Nga, Pretorius, Lara and Geering, Andrew (2026). National diagnostic protocol: avocado scab caused by Elsinoe perseae. Sydney, NSW, Australia: Subcommittee on Plant Health Diagnostics.

National diagnostic protocol: avocado scab caused by Elsinoe perseae

2025

Journal Article

Development of a multiplex RT-qPCR assay to detect citrus apscaviroids and its use in citrus viroid surveys in Australia

Chambers, Grant Anthony, Geering, Andrew David William, Englezou, Anna, Holford, Paul, Vidalakis, Georgios and Donovan, Nerida Jane (2025). Development of a multiplex RT-qPCR assay to detect citrus apscaviroids and its use in citrus viroid surveys in Australia. Australasian Plant Pathology, 54 (6), 559-568. doi: 10.1007/s13313-025-01072-z

Development of a multiplex RT-qPCR assay to detect citrus apscaviroids and its use in citrus viroid surveys in Australia

2025

Journal Article

Summary of taxonomy changes ratified by the International Committee on Taxonomy of Viruses from the Plant Viruses Subcommittee, 2025

Rubino, Luisa, Abrahamian, Peter, An, Wenxia, Aranda, Miguel A., Ascencio-Ibañez, José T., Bejerman, Nicolas, Blouin, Arnaud G., Candresse, Thierry, Canto, Tomas, Cao, Mengji, Carr, John P., Cho, Won Kyong, Constable, Fiona, Dasgupta, Indranil, Debat, Humberto, Dietzgen, Ralf G., Digiaro, Michele, Donaire, Livia, Elbeaino, Toufic, Fargette, Denis, Filardo, Fiona, Fischer, Matthias G., Fontdevila, Nuria, Fox, Adrian, Freitas-Astua, Juliana, Fuchs, Marc, Geering, Andrew D. W., Ghafari, Mahan, Hafrén, Anders ... ICTV Taxonomy Summary Consortium (2025). Summary of taxonomy changes ratified by the International Committee on Taxonomy of Viruses from the Plant Viruses Subcommittee, 2025. Journal of General Virology, 106 (7) 002114, 1-20. doi: 10.1099/jgv.0.002114

Summary of taxonomy changes ratified by the International Committee on Taxonomy of Viruses from the Plant Viruses Subcommittee, 2025

2025

Journal Article

New molecular diagnostic and surveillance tools for orthotospoviruses and their thrips vectors

Chao, Hsu-Yao, Dietzgen, Ralf G., Thomas, John E. and Geering, Andrew D. W. (2025). New molecular diagnostic and surveillance tools for orthotospoviruses and their thrips vectors. Phytopathology Research, 7 (1) 45, 1-14. doi: 10.1186/s42483-025-00336-2

New molecular diagnostic and surveillance tools for orthotospoviruses and their thrips vectors

2025

Journal Article

Origins and distribution of Panicum Mosaic virus and Sugarcane Mosaic virus on Stenotaphrum secundatum in Australia

Tran, Nga T., Teo, Ai Chin, McTaggart, Alistair R., Campbell, Paul R., Persley, Denis M., Thomas, John E. and Geering, Andrew D. W. (2025). Origins and distribution of Panicum Mosaic virus and Sugarcane Mosaic virus on Stenotaphrum secundatum in Australia. Phytopathology, 115 (4), 431-440. doi: 10.1094/phyto-11-24-0363-r

Origins and distribution of Panicum Mosaic virus and Sugarcane Mosaic virus on Stenotaphrum secundatum in Australia

2025

Journal Article

Evaluation of spider lilies (Hymenocallis spp.) as sentinel plants for orthotospoviruses

Chao, Hsu-Yao, Dietzgen, Ralf G., Thomas, John E. and Geering, Andrew D. W. (2025). Evaluation of spider lilies (Hymenocallis spp.) as sentinel plants for orthotospoviruses. Phytopathology Research, 7 (1) 37, 1-12. doi: 10.1186/s42483-025-00325-5

Evaluation of spider lilies (Hymenocallis spp.) as sentinel plants for orthotospoviruses

2025

Journal Article

The complete genome sequence of a novel legume closterovirus from Norfolk Island

Thomas, John E., Jackson, Mark, Campbell, Paul R., Tran, Nga T. and Geering, Andrew D.W. (2025). The complete genome sequence of a novel legume closterovirus from Norfolk Island. Australasian Plant Pathology, 54 (2), 131-135. doi: 10.1007/s13313-025-01023-8

The complete genome sequence of a novel legume closterovirus from Norfolk Island

2025

Journal Article

Soilborne Serratia fonticola in macadamia roots implicated as a causative agent of abnormal vertical growth

Zakeel, Mohamed C.M., Geering, Andrew D.W. and Akinsanmi, Olufemi A. (2025). Soilborne Serratia fonticola in macadamia roots implicated as a causative agent of abnormal vertical growth. Applied Soil Ecology, 206 105914, 1-9. doi: 10.1016/j.apsoil.2025.105914

Soilborne Serratia fonticola in macadamia roots implicated as a causative agent of abnormal vertical growth

2025

Journal Article

Characterisation of the genetic diversity of citrus viroid VII using amplicon sequencing

Chambers, Grant A., Geering, Andrew D. W., Bogema, Daniel R., Holford, Paul, Vidalakis, Georgios and Donovan, Nerida J. (2025). Characterisation of the genetic diversity of citrus viroid VII using amplicon sequencing. Archives of Virology, 170 (1) 12, 12. doi: 10.1007/s00705-024-06191-4

Characterisation of the genetic diversity of citrus viroid VII using amplicon sequencing

2024

Journal Article

First report of the hibiscus strain of citrus leprosis virus C2 (Cilevirus colombiaense) infecting Hoya macgillivrayi in Australia

Chao, Hsu-Yao, Dietzgen, Ralf G., Thomas, John E. and Geering, Andrew D. W. (2024). First report of the hibiscus strain of citrus leprosis virus C2 (Cilevirus colombiaense) infecting Hoya macgillivrayi in Australia. Australasian Plant Pathology, 54 (1), 33-35. doi: 10.1007/s13313-024-01016-z

First report of the hibiscus strain of citrus leprosis virus C2 (Cilevirus colombiaense) infecting Hoya macgillivrayi in Australia

2024

Journal Article

First report of iris yellow spot virus infecting shallot (Allium cepa var. aggregatum) in Australia

Nurulita, Sari, Geering, Andrew D. W., Crew, Kathleen S., Harper, Stephen and Thomas, John E. (2024). First report of iris yellow spot virus infecting shallot (Allium cepa var. aggregatum) in Australia. Australasian Plant Pathology, 53 (6), 593-596. doi: 10.1007/s13313-024-00999-z

First report of iris yellow spot virus infecting shallot (Allium cepa var. aggregatum) in Australia