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2025 Journal Article Snapshot genomic surveillance reveals insights into antimicrobial resistance and lineage diversity of uropathogens in older adults in QueenslandPermana, Budi, Falconer, Caitlin, Mayer-Coverdale, Johanna, Robson, Jennifer, Cuddihy, Thom, Schembri, Mark A., Paterson, David L., Harris, Patrick N. A. and Forde, Brian M. (2025). Snapshot genomic surveillance reveals insights into antimicrobial resistance and lineage diversity of uropathogens in older adults in Queensland. Open Forum Infectious Diseases, 12 (10) ofaf610, 1-8. doi: 10.1093/ofid/ofaf610 |
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2025 Journal Article Evaluation of an automated molecular diagnostic instrument for direct detection of Burkholderia pseudomallei from clinical specimensGassiep, Ian, Glover, Matthew, Beecham, Mark, Gorman, Brian, Page, Melissa, Stewart, James and Harris, Patrick N. A. (2025). Evaluation of an automated molecular diagnostic instrument for direct detection of Burkholderia pseudomallei from clinical specimens. Journal of Medical Microbiology, 74 (9) 002074, 1-6. doi: 10.1099/jmm.0.002074 |
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2025 Journal Article Emergence of a carbapenem-resistant atypical uropathogenic Escherichia coli clone as an increasing cause of urinary tract infectionWalker, Lachlan L., Phan, Minh-Duy, Permana, Budi, Lian, Zheng Jie, Nhu, Nguyen Thi Khanh, Cuddihy, Thom, Peters, Kate M., Ramsay, Kay A., Stewart, Chelsea, Pfennigwerth, Niels, Kidd, Timothy J., Harris, Patrick N. A., Paterson, David L., Sweet, Matthew J., Forde, Brian M. and Schembri, Mark A. (2025). Emergence of a carbapenem-resistant atypical uropathogenic Escherichia coli clone as an increasing cause of urinary tract infection. Nature Communications, 16 (1) 8200, 1-10. doi: 10.1038/s41467-025-63477-0 |
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2025 Journal Article Effectiveness and safety of antibiotics in kidney transplant recipients with asymptomatic bacteriuria: a systematic review and meta-analysis of randomized controlled trialsAslan, Abdullah Tarik, Tanriverdi, Lokman Hekim, Hernandez, Adrian V, Akova, Umut, Kutluca, Kursat, Chan, Samuel, Coussement, Julien, Manuel, Arreola Guerra Jose, Origuen, Julia, Sabé, Núria, Harris, Patrick N A, Akova, Murat and Paterson, David L (2025). Effectiveness and safety of antibiotics in kidney transplant recipients with asymptomatic bacteriuria: a systematic review and meta-analysis of randomized controlled trials. Open Forum Infectious Diseases, 12 (9) ofaf502, 1-9. doi: 10.1093/ofid/ofaf502 |
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2025 Journal Article Antibiotic therapy for severe bacterial infectionsTimsit, Jean-Francois, Ling, Lowell, de Montmollin, Etienne, Bracht, Hendrik, Conway-Morris, Andrew, De Bus, Liesbet, Falcone, Marco, Harris, Patrick N. A., Machado, Flavia R., Paiva, Jose-Artur, Paterson, David L., Poulakou, Garyphallia, Roberts, Jason A., Roger, Claire, Shorr, Andrew F., Tabah, Alexis and Lipman, Jeffrey (2025). Antibiotic therapy for severe bacterial infections. Intensive Care Medicine, 51 (10), 1867-1885. doi: 10.1007/s00134-025-08063-0 |
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2025 Journal Article Probe-capture targeted next-generation sequencing: A novel approach for pathogen and antimicrobial resistance detection in sepsisRavi, Chitra, Irwin, Adam D. and Harris, Patrick N. A. (2025). Probe-capture targeted next-generation sequencing: A novel approach for pathogen and antimicrobial resistance detection in sepsis. Clinical and Translational Discovery, 5 (4) e70079, 4. doi: 10.1002/ctd2.70079 |
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2025 Journal Article Population-based longitudinal study over two decades of Candida and Candida-like species bloodstream infection reveals gender and species differences in mortality, recurrence and resistanceStewart, Adam G., Laupland, Kevin B., Edwards, Felicity, Koo, Sophia, Hammond, Sarah P., Harris, Patrick N. A., Paterson, David L., Slavin, Monica A. and Chen, Sharon C-A (2025). Population-based longitudinal study over two decades of Candida and Candida-like species bloodstream infection reveals gender and species differences in mortality, recurrence and resistance. Journal of Infection, 91 (1) 106513, 1-11. doi: 10.1016/j.jinf.2025.106513 |
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2025 Journal Article Differences in antimicrobial resistance gene abundance and microbial diversity of the gut microbiome in patients on antibiotics enrolled in a clinical trialStewart, Adam G., Harris, Patrick N. A., Graham, Rikki M. A., Jennison, Amy V., Schlebusch, Sanmarie, Kakkanat, Asha, Harris-Brown, Tiffany, Paterson, David L. and Forde, Brian M. (2025). Differences in antimicrobial resistance gene abundance and microbial diversity of the gut microbiome in patients on antibiotics enrolled in a clinical trial. Therapeutic Advances in Infectious Disease, 12 20499361251337597, 1-12. doi: 10.1177/20499361251337597 |
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2025 Journal Article Clinical and cost implications of Biofire FilmArray® meningitis / encephalitis panel testing: a systematic reviewRafiei, Nastaran, Subedi, Shradha, Harris, Patrick NA and Paterson, David L (2025). Clinical and cost implications of Biofire FilmArray® meningitis / encephalitis panel testing: a systematic review. Diagnostic Microbiology and Infectious Disease, 112 (3) 116823, 116823. doi: 10.1016/j.diagmicrobio.2025.116823 |
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2025 Journal Article Community-onset bloodstream infection among people with opioid use disorders: a twenty-year population-based cohort study in Queensland, AustraliaLaupland, Kevin B., Stewart, Adam G., Edwards, Felicity, Harris, Patrick N. A. and Coulter, Sonali (2025). Community-onset bloodstream infection among people with opioid use disorders: a twenty-year population-based cohort study in Queensland, Australia. Infectious Diseases, 57 (7), 669-675. doi: 10.1080/23744235.2025.2471823 |
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2025 Journal Article Comparison of Piperacillin-tazobactam and Vancomycin (TZP-VAN) with Piperacillin-tazobactam and Teicoplanin (TZP-TEI) for the risk of Acute Kidney Injury (CONCOMITANT): A prospective observational, multinational, multi-centre cohort studyAslan, Abdullah Tarık, Kara, Emre, Köksal, Gamze, Bilir, Yeliz, Saraçoğlu, Kemal Tolga, Eser, Fatma, Güner, Rahmet, Alkan, Sevil, D'Avino, Alessandro, Escudero-Sanchez, Rosa, Kutluca, Kürşat, Kaya, Sibel Yıldız, Saltoğlu, Neşe, Loiacono, Laura, Coladonato, Simona, Giacomo, Paola Del, Cascio, Antonio, Pallotto, Carlo, Francisci, Daniela, Öztürk, Barçın, Pınar, Aslı, Dağ, Osman, Harris, Patrick N.A., Paterson, David L. and Akova, Murat (2025). Comparison of Piperacillin-tazobactam and Vancomycin (TZP-VAN) with Piperacillin-tazobactam and Teicoplanin (TZP-TEI) for the risk of Acute Kidney Injury (CONCOMITANT): A prospective observational, multinational, multi-centre cohort study. International Journal of Antimicrobial Agents, 65 (3) 107446, 1-6. doi: 10.1016/j.ijantimicag.2025.107446 |
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2025 Journal Article Resistance Optimised Antibiotic Dosing (The ROAD Study): Is dosing of meropenem and piperacillin-tazobactam optimised to prevent the emergence of antibiotic resistance safe and feasible in the ICU? A pilot studyRoberts, J. A., Heffernan, A. J., Chai, M. G., Harris, P. N. A., Legg, A., Farkas, A., Laupland, K., Dhanani, J., Fourie, C., Murray, L., Abdul-Aziz, H., Ungerer, J., McWhinney, B., Lipman, J. and Cotta, M. O. (2025). Resistance Optimised Antibiotic Dosing (The ROAD Study): Is dosing of meropenem and piperacillin-tazobactam optimised to prevent the emergence of antibiotic resistance safe and feasible in the ICU? A pilot study. CMI Communications, 2 (1) 105051, 1-7. doi: 10.1016/j.cmicom.2024.105051 |
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2025 Journal Article Current antibiotic options for the treatment of infections with AmpC-producing enterobacteralesNgiam, Jinghao Nicholas, Koh, Matthew Chung Yi, Harris, Patrick N. A. and Lye, David Chien Boon (2025). Current antibiotic options for the treatment of infections with AmpC-producing enterobacterales. Infectious Disease Clinics of North America, 40 (1), 61-77. doi: 10.1016/j.idc.2025.11.003 |
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2025 Journal Article Securing jugular central venous catheters with dressings fixed to a liquid adhesive to prevent dressing failure in intensive care patients (the STICKY Trial): a randomized controlled trialMarsh, Nicole, O’Brien, Catherine, Larsen, Emily N., Alexandrou, Evan, Ware, Robert S., Pearse, India, Coyer, Fiona, Patel, Maharshi S., Royle, Ruth H., Rickard, Claire M., Sosnowski, Kellie, Harris, Patrick N. A., Laupland, Kevin B., Bauer, Michelle J., Fraser, John F., McManus, Craig, Byrnes, Joshua and Corley, Amanda (2025). Securing jugular central venous catheters with dressings fixed to a liquid adhesive to prevent dressing failure in intensive care patients (the STICKY Trial): a randomized controlled trial. Critical Care Medicine, 53 (2), e282-e293. doi: 10.1097/ccm.0000000000006533 |
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2025 Conference Publication A perplexing diagnosis: role of real-time PCR for diagnosis of Haycocknema perplexumDavidson, Natalie, Lowry, Kym, Parmar, Bijendrasinh Vikramsinh, Robertson, Thomas, Gupta, Rita, Harris, Patrick and Whiley, David (2025). A perplexing diagnosis: role of real-time PCR for diagnosis of Haycocknema perplexum. Pathology Update 2025, Melbourne, VIC Australia, 21-23 February 2025. Oxford, United Kingdom: Elsevier. doi: 10.1016/j.pathol.2024.12.378 |
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2025 Journal Article A Comparison of Peripherally Inserted Central Catheter MaterialsUllman, Amanda J., August, Deanne, Kleidon, Tricia M., Walker, Rachel M., Marsh, Nicole, Bulmer, Andrew C., Pearch, Ben, Runnegar, Naomi, Leema, Joanne, Lee-Archer, Paul, Biles, Cathy, Gibson, Victoria, Royle, Ruth, Southam, Katrina, Byrnes, Joshua, Chopra, Vineet, Coulthard, Alan, Mollee, Peter, Rickard, Claire M., Harris, Patrick N. A. and Ware, Robert S. (2025). A Comparison of Peripherally Inserted Central Catheter Materials. New England Journal of Medicine, 392 (2), 161-172. doi: 10.1056/nejmoa2406815 |
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2025 Journal Article Klebsiella pneumoniae species complex bloodstream infection in adult patients: changing epidemiology and determinants of poor outcomesStewart, Adam G., Harris, Patrick N. A., Edwards, Felicity, Kiani, Behzad, Paterson, David L. and Laupland, Kevin B. (2025). Klebsiella pneumoniae species complex bloodstream infection in adult patients: changing epidemiology and determinants of poor outcomes. Infection, 53 (3), 1179-1187. doi: 10.1007/s15010-024-02457-w |
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2025 Journal Article Differentiation of Providencia species bloodstream infections: A population-based analysisEdwards, Felicity, Edwards, Kristin H., Tabah, Alexis, Harris, Patrick N.A. and Laupland, Kevin B. (2025). Differentiation of Providencia species bloodstream infections: A population-based analysis. Diagnostic Microbiology and Infectious Disease, 111 (1) 116602, 1-5. doi: 10.1016/j.diagmicrobio.2024.116602 |
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2024 Journal Article Risk of mortality in Fusobacterium species bloodstream infection from a large Australian cohortStewart, Adam G., Edwards, Felicity, Harris, Patrick N. A., Paterson, David L. and Laupland, Kevin B. (2024). Risk of mortality in Fusobacterium species bloodstream infection from a large Australian cohort. European Journal of Clinical Microbiology and Infectious Diseases, 44 (2), 427-436. doi: 10.1007/s10096-024-05012-5 |
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2024 Journal Article Pathogen genomics in healthcare: overcoming barriers to proactive surveillanceSundermann, Alexander J., Rosa, Rossana, Harris, Patrick N. A., Snitkin, Evan, Javaid, Waleed, Moore, Nicholas M., Hayden, Mary K., Allen, Krisandra, Rodino, Kyle, Peacock, Sharon J., Abbo, Lilian M. and Harrison, Lee H. (2024). Pathogen genomics in healthcare: overcoming barriers to proactive surveillance. Antimicrobial Agents and Chemotherapy, 69 (1), e0147924. doi: 10.1128/aac.01479-24 |
