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2019 Journal Article On the analysis of rapidly sampled fMRI dataChen, Jingyuan E., Polimeni, Jonathan R., Bollmann, Saskia and Glover, Gary H. (2019). On the analysis of rapidly sampled fMRI data. NeuroImage, 188, 807-820. doi: 10.1016/j.neuroimage.2019.02.008 |
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2017 Journal Article Serial correlations in single-subject fMRI with sub-second TRBollmann, Saskia, Puckett, Alexander M., Cunnington, Ross and Barth, Markus (2017). Serial correlations in single-subject fMRI with sub-second TR. NeuroImage, 166, 152-166. doi: 10.1016/j.neuroimage.2017.10.043 |
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2017 Journal Article Analysis and correction of field fluctuations in fMRI data using field monitoringBollmann, Saskia, Kasper, Lars, Vannesjo, S. Johanna, Diaconescu, Andreea O., Dietrich, Benjamin E., Gross, Simon, Stephan, Klaas E. and Pruessmann, Klaas P. (2017). Analysis and correction of field fluctuations in fMRI data using field monitoring. Neuroimage, 154, 92-105. doi: 10.1016/j.neuroimage.2017.01.014 |
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2025 Journal Article T1-weighted fMRI in mouse visual cortex using an iron oxide nanoparticle contrast agent and UTE imaging at 9.4 TJain, Naman, Bollmann, Saskia, Chuang, Kai-Hsiang, Polimeni, Jonathan R. and Barth, Markus (2025). T1-weighted fMRI in mouse visual cortex using an iron oxide nanoparticle contrast agent and UTE imaging at 9.4 T. Magnetic Resonance in Medicine mrm.70103. doi: 10.1002/mrm.70103 |
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2025 Journal Article Segmentation of the human tongue musculature using MRI: Field guide and validation in motor neuron diseaseShaw, Thomas B., Ribeiro, Fernanda L., Zhu, Xiangyun, Aiken, Patrick, Bollmann, Saskia, Bollmann, Steffen, Chang, Jeryn, Chidley, Kali, Dempsey-Jones, Harriet, Eftekhari, Zeinab, Gillespie, Jennifer, Henderson, Robert D., Kiernan, Matthew C., Ktena, Ira, McCombe, Pamela A., Ngo, Shyuan T., Taubert, Shana T., Whelan, Brooke-Mai, Ye, Xincheng, Steyn, Frederik J., Tu, Sicong and Barth, Markus (2025). Segmentation of the human tongue musculature using MRI: Field guide and validation in motor neuron disease. Computers in Biology and Medicine, 196 (Part B) 110824, 1-13. doi: 10.1016/j.compbiomed.2025.110824 |
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2025 Journal Article Visual stimulus-evoked blood velocity responses in individual human posterior cerebral arteries measured with dynamic phase-contrast functional MR angiographyHu, Zhangxuan, Proulx, Sébastien, Hartung, Grant A., Gomez, Daniel E. P., Chen, Jingyuan E., Varadarajan, Divya, Gökçal, Elif, Bollmann, Saskia, Tan, Can Ozan, Gurol, M. Edip and Polimeni, Jonathan R. (2025). Visual stimulus-evoked blood velocity responses in individual human posterior cerebral arteries measured with dynamic phase-contrast functional MR angiography. Imaging Neuroscience, 3 IMAG.a.148. doi: 10.1162/imag.a.148 |
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2025 Journal Article In vivo 7 Tesla MRI of non-human primate intracortical microvascular architectureWang, Jianbao, Liu, Yipeng, Ma, Yuhan, Feng, Yuqi, Lin, Libo, Ping, An, Tian, Feiyan, Zhang, Xiaotong, Berman, Avery J.L., Bollmann, Saskia, Polimeni, Jonathan R. and Roe, Anna Wang (2025). In vivo 7 Tesla MRI of non-human primate intracortical microvascular architecture. Neuron, 113 (16), 2621-2635.e5. doi: 10.1016/j.neuron.2025.05.028 |
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2025 Journal Article An fMRI dataset for appetite neural correlates in people living with Motor Neuron DiseaseChang, Jeryn, Lv, JingLei, Guo, Christine C., Lucia, Diana, Bollmann, Saskia, Garner, Kelly, McCombe, Pamela A., Henderson, Robert D., Shaw, Thomas B., Steyn, Frederik J. and Ngo, Shyuan T. (2025). An fMRI dataset for appetite neural correlates in people living with Motor Neuron Disease. Scientific Data, 12 (1) 466, 466. doi: 10.1038/s41597-025-04828-w |
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2025 Other Outputs T1-weighted fMRI in mouse visual cortex using an Iron Oxide Nanoparticle contrast agent and Ultrashort Echo Time (UTE) imaging at 9.4 TJain, Naman, Bollmann, Saskia, Chuang, Kai-Hsiang, Polimeni, Jonathan R. and Barth, Markus (2025). T1-weighted fMRI in mouse visual cortex using an Iron Oxide Nanoparticle contrast agent and Ultrashort Echo Time (UTE) imaging at 9.4 T. doi: 10.1101/2025.03.17.643844 |
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2025 Journal Article Appetite loss in patients with motor neuron disease: impact on weight loss and neural correlates of visual food cuesChang, Jeryn, Shaw, Thomas B., McCombe, Pamela A., Henderson, Robert D., Lucia, Diana, Guo, Christine C., Lv, Jinglei, Garner, Kelly, Bollmann, Saskia, Ngo, Shyuan T. and Steyn, Frederik J. (2025). Appetite loss in patients with motor neuron disease: impact on weight loss and neural correlates of visual food cues. Brain Communications, 7 (2) fcaf111, 1-14. doi: 10.1093/braincomms/fcaf111 |
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2025 Conference Publication Progression of visual-stimulus-evoked blood velocity response timing across individual arteries and veins measured with phase-contrast fMRAHu, Zhangxuan, Proulx, Sébastien, Varadarajan, Divya, Gomez, Daniel, Bollmann, Saskia and Polimeni, Jonathan (2025). Progression of visual-stimulus-evoked blood velocity response timing across individual arteries and veins measured with phase-contrast fMRA. Concord, CA: ISMRM. doi: 10.58530/2025/0215 |
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2024 Journal Article VesselBoost: a Python toolbox for small blood vessel segmentation in human magnetic resonance angiography dataXu, Marshall, Ribeiro, Fernanda L., Barth, Markus, Bernier, Michaël, Bollmann, Steffen, Chatterjee, Soumick, Cognolato, Francesco, Gulban, Omer F., Itkyal, Vaibhavi, Liu, Siyu, Mattern, Hendrik, Polimeni, Jonathan R., Shaw, Thomas B., Speck, Oliver and Bollmann, Saskia (2024). VesselBoost: a Python toolbox for small blood vessel segmentation in human magnetic resonance angiography data. Aperture Neuro, 4, 1-13. doi: 10.52294/001c.123217 |
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2024 Journal Article Three-dimensional EPI with shot-selective CAIPIRIHANA for rapid high-resolution quantitative susceptibility mapping at 3 TTourell, Monique, Jin, Jin, Bachrata, Beata, Stewart, Ashley, Ropele, Stefan, Enzinger, Christian, Bollmann, Saskia, Bollmann, Steffen, Robinson, Simon Daniel, O'Brien, Kieran and Barth, Markus (2024). Three-dimensional EPI with shot-selective CAIPIRIHANA for rapid high-resolution quantitative susceptibility mapping at 3 T. Magnetic Resonance in Medicine, 92 (3), 997-1010. doi: 10.1002/mrm.30101 |
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2024 Journal Article Neurodesk: an accessible, flexible and portable data analysis environment for reproducible neuroimagingRenton, Angela I., Dao, Thuy T., Johnstone, Tom, Civier, Oren, Sullivan, Ryan P., White, David J., Lyons, Paris, Slade, Benjamin M., Abbott, David F., Amos, Toluwani J., Bollmann, Saskia, Botting, Andy, Campbell, Megan E. J., Chang, Jeryn, Close, Thomas G., Dörig, Monika, Eckstein, Korbinian, Egan, Gary F., Evas, Stefanie, Flandin, Guillaume, Garner, Kelly G., Garrido, Marta I., Ghosh, Satrajit S., Grignard, Martin, Halchenko, Yaroslav O., Hannan, Anthony J., Heinsfeld, Anibal S., Huber, Laurentius, Hughes, Matthew E. ... Bollmann, Steffen (2024). Neurodesk: an accessible, flexible and portable data analysis environment for reproducible neuroimaging. Nature Methods, 21 (2), 804-808. doi: 10.1038/s41592-023-02145-x |
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2024 Conference Publication Investigating timing of BOLD fMRI responses in individual cortical vessels to short and long stimulus durationsVaradarajan, Divya, Proulx, Sebastien, Wighton, Paul, Hu, Zhangxuan, Chen, Jingyuan, Bollmann, Saskia, Berman, Avery and Polimeni, Jonathan (2024). Investigating timing of BOLD fMRI responses in individual cortical vessels to short and long stimulus durations. 2024 ISMRM & ISMRT Annual Meeting & Exhibition, Singapore, 4-9 May 2024. Concord, CA: ISMRM. doi: 10.58530/2024/0536 |
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2024 Conference Publication Fast, High-resolution Whole Brain SWI and QSM with CAIPIRINHA 3D-EPI and Deep Learning ReconstructionJin, Jin, Nickel, Dominik, Pfeuffer, Josef, Tourell, Monique, Stewart, Ashley, Bollmann, Steffen, Bollmann, Saskia, Barth, Markus and O‘Brien, Kieran (2024). Fast, High-resolution Whole Brain SWI and QSM with CAIPIRINHA 3D-EPI and Deep Learning Reconstruction. 2024 ISMRM & ISMRT Annual Meeting, Singapore, 4-9 May 2024. Concord, CA United States: ISMRM. doi: 10.58530/2024/2822 |
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2024 Conference Publication Phase jolt: Second spatial derivative of phase images is a new contrast that offers many benefits for SWI type processingGulban, Omer Faruk, Deistung, Andreas, Tse, Desmond Ho Yan, Bollmann, Saskia, Huber, Renzo, Goebel, Rainer, Kay, Kendrick and Ivanov, Dimo (2024). Phase jolt: Second spatial derivative of phase images is a new contrast that offers many benefits for SWI type processing. 2024 ISMRM & ISMRT Annual Meeting, Singapore, 4-9 May 2024. Concord, CA United States: ISMRM. doi: 10.58530/2024/1070 |
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2024 Conference Publication Visual stimulus-evoked blood velocity responses at far upstream branches of the Posterior Cerebral Artery measured with phase-contrast fMRAHu, Zhangxuan, Proulx, Sebastien, Gomez, Daniel, Varadarajan, Divya, Bollmann, Saskia, Tan, Can Ozan, Gokcal, Elif, Gurol, M. Edip and Polimeni, Jonathan (2024). Visual stimulus-evoked blood velocity responses at far upstream branches of the Posterior Cerebral Artery measured with phase-contrast fMRA. 2024 ISMRM & ISMRT Annual Meeting & Exhibition, Singapore, 4-9 May 2024. Concord, CA United States: ISMRM. doi: 10.58530/2024/1287 |
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2024 Conference Publication T1-weighted fMRI in mouse visual cortex at 0.1 mm resolution using a UTE sequence after iron-oxide contrast injectionJain, Naman, Bollmann, Saskia, Chuang, Kai-Hsiang, Polimeni, Jonathan and Barth, Markus (2024). T1-weighted fMRI in mouse visual cortex at 0.1 mm resolution using a UTE sequence after iron-oxide contrast injection. 2024 ISMRM & ISMRT Annual Meeting, Singapore, 4-9 May 2024. Concord, CA United States: ISMRM. doi: 10.58530/2024/3410 |
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2024 Conference Publication Multi-slab whole-brain in vivo 0.35 mm human brain at 7 T with low undersampling to validate future acceleration & denoisingGulban, Omer Faruk, Dowdle, Logan, Tse, Desmond Ho Yan, Bollmann, Saskia, Goebel, Rainer, Poser, Benedikt A. and Ivanov, Dimo (2024). Multi-slab whole-brain in vivo 0.35 mm human brain at 7 T with low undersampling to validate future acceleration & denoising. 2024 ISMRM & ISMRT Annual Meeting, Singapore, 4-9 May 2024. Concord, CA United States: ISMRM. doi: 10.58530/2024/0959 |
