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2025

Journal Article

Quantitative susceptibility mapping via deep neural networks with iterative reverse concatenations and recurrent modules

Li, Min, Chen, Chen, Xiong, Zhuang, Liu, Yin, Rong, Pengfei, Shan, Shanshan, Liu, Feng, Sun, Hongfu and Gao, Yang (2025). Quantitative susceptibility mapping via deep neural networks with iterative reverse concatenations and recurrent modules. Medical Physics, 52 (6), 4341-4354. doi: 10.1002/mp.17747

Quantitative susceptibility mapping via deep neural networks with iterative reverse concatenations and recurrent modules

2025

Journal Article

Integrative radiomics analysis of peri-tumoral and habitat zones for predicting major pathological response to neoadjuvant immunotherapy and chemotherapy in non-small cell lung cancer

Han, Dan, Zhao, Junfeng, Hao, Shaoyu, Fu, Shenbo, Wei, Ran, Zheng, Xin, Zhao, Qian, Liu, Chengxin, Sun, Hongfu, Fu, Chengrui, Wang, Zhongtang, Huang, Wei and Li, Baosheng (2025). Integrative radiomics analysis of peri-tumoral and habitat zones for predicting major pathological response to neoadjuvant immunotherapy and chemotherapy in non-small cell lung cancer. Translational Lung Cancer Research, 14 (4). doi: 10.21037/tlcr-2024-1131

Integrative radiomics analysis of peri-tumoral and habitat zones for predicting major pathological response to neoadjuvant immunotherapy and chemotherapy in non-small cell lung cancer

2025

Journal Article

Using EnKF data assimilation to improve predictions of volcanic ash dispersion

Weng, Zefeng, Zhu, Lin, Li, Jun, Zhang, Yiran, Liu, Xuyan, Su, Wu, Sun, Hongfu and Li, Xinyu (2025). Using EnKF data assimilation to improve predictions of volcanic ash dispersion. Journal of Geophysical Research-Atmospheres, 130 (8) e2024JD042215, 1-21. doi: 10.1029/2024JD042215

Using EnKF data assimilation to improve predictions of volcanic ash dispersion

2025

Journal Article

MRF-mixer: a simulation-based deep learning framework for accelerated and accurate magnetic resonance fingerprinting reconstruction

Ding, Tianyi, Gao, Yang, Xiong, Zhuang, Liu, Feng, Cloos, Martijn A. and Sun, Hongfu (2025). MRF-mixer: a simulation-based deep learning framework for accelerated and accurate magnetic resonance fingerprinting reconstruction. Information, 16 (3) 218, 1-16. doi: 10.3390/info16030218

MRF-mixer: a simulation-based deep learning framework for accelerated and accurate magnetic resonance fingerprinting reconstruction

2024

Journal Article

Accurate location describe and management of lymph node recurrence after esophagectomy for thoracic esophageal squamous cell carcinoma: a retrospective cohort study

Zhao, Qian, Sun, Jinglong, Zheng, Feng, Fu, Chengrui, Sun, Hongfu, Liu, Chengxin, Wang, Zhongtang, Huang, Wei, Wang, Ruozheng and Li, Baosheng (2024). Accurate location describe and management of lymph node recurrence after esophagectomy for thoracic esophageal squamous cell carcinoma: a retrospective cohort study. International Journal of Surgery, 110 (6), 3440-3449. doi: 10.1097/JS9.0000000000001242

Accurate location describe and management of lymph node recurrence after esophagectomy for thoracic esophageal squamous cell carcinoma: a retrospective cohort study

2024

Journal Article

MH2AFormer: an efficient multiscale hierarchical hybrid attention with a transformer for bladder wall and tumor segmentation

Li, Xiang, Wang, Jian, Wei, Haifeng, Cong, Jinyu, Sun, Hongfu, Wang, Pingping and Wei, Benzheng (2024). MH2AFormer: an efficient multiscale hierarchical hybrid attention with a transformer for bladder wall and tumor segmentation. IEEE Journal of Biomedical and Health Informatics, 28 (8), 4772-4784. doi: 10.1109/JBHI.2024.3397698

MH2AFormer: an efficient multiscale hierarchical hybrid attention with a transformer for bladder wall and tumor segmentation

2024

Journal Article

Quantitative susceptibility mapping through model-based deep image prior (MoDIP)

Xiong, Zhuang, Gao, Yang, Liu, Yin, Fazlollahi, Amir, Nestor, Peter, Liu, Feng and Sun, Hongfu (2024). Quantitative susceptibility mapping through model-based deep image prior (MoDIP). NeuroImage, 291 120583, 120583. doi: 10.1016/j.neuroimage.2024.120583

Quantitative susceptibility mapping through model-based deep image prior (MoDIP)

2024

Journal Article

Plug-and-Play latent feature editing for orientation-adaptive quantitative susceptibility mapping neural networks

Gao, Yang, Xiong, Zhuang, Shan, Shanshan, Liu, Yin, Rong, Pengfei, Li, Min, Wilman, Alan H., Pike, G. Bruce, Liu, Feng and Sun, Hongfu (2024). Plug-and-Play latent feature editing for orientation-adaptive quantitative susceptibility mapping neural networks. Medical Image Analysis, 94 103160, 1-11. doi: 10.1016/j.media.2024.103160

Plug-and-Play latent feature editing for orientation-adaptive quantitative susceptibility mapping neural networks

2023

Journal Article

Do higher radiation doses improve survival for cervical esophageal squamous cell cancer patients treated with definitive chemoradiotherapy using intensity-modulated radiotherapy? A propensity-score matched analysis

Xie, Feihong, Liu, Tingting, Wang, Xinran, Dong, Jinling, Huang, Wei and Sun, Hongfu (2023). Do higher radiation doses improve survival for cervical esophageal squamous cell cancer patients treated with definitive chemoradiotherapy using intensity-modulated radiotherapy? A propensity-score matched analysis. Journal of Cancer Research and Therapeutics, 19 (6), 1582-1588. doi: 10.4103/jcrt.jcrt_321_23

Do higher radiation doses improve survival for cervical esophageal squamous cell cancer patients treated with definitive chemoradiotherapy using intensity-modulated radiotherapy? A propensity-score matched analysis

2023

Journal Article

Editorial: Imaging of neurometabolism

Zheng, Wenbin, Dai, Zhouzhi, Wu, Renhua and Sun, Hongfu (2023). Editorial: Imaging of neurometabolism. Frontiers in Neuroscience, 17 1286361, 1286361. doi: 10.3389/fnins.2023.1286361

Editorial: Imaging of neurometabolism

2023

Journal Article

MapFlow: latent transition via normalizing flow for unsupervised domain adaptation

Askari, Hossein, Latif, Yasir and Sun, Hongfu (2023). MapFlow: latent transition via normalizing flow for unsupervised domain adaptation. Machine Learning, 112 (8), 2953-2974. doi: 10.1007/s10994-023-06357-2

MapFlow: latent transition via normalizing flow for unsupervised domain adaptation

2023

Journal Article

Sintilimab as maintenance treatment for local/regional recurrent esophageal squamous carcinoma after concurrent chemoradiotherapy: a single-arm Ib/II phase study

Liu, Chengxin, Sun, Hongfu, Huang, Wei, Wang, Zhongtang, Fu, Chengrui, Han, Dan, Zhao, Qian, Wu, Xue and Li, Baosheng (2023). Sintilimab as maintenance treatment for local/regional recurrent esophageal squamous carcinoma after concurrent chemoradiotherapy: a single-arm Ib/II phase study. Frontiers in Immunology, 14 1193394. doi: 10.3389/fimmu.2023.1193394

Sintilimab as maintenance treatment for local/regional recurrent esophageal squamous carcinoma after concurrent chemoradiotherapy: a single-arm Ib/II phase study

2023

Journal Article

Increased glymphatic system activity in patients with mild traumatic brain injury

Dai, Zhuozhi, Yang, Zhiqi, Li, Zhaolin, Li, Mu, Sun, Hongfu, Zhuang, Zerui, Yang, Weichao, Hu, Zehuan, Chen, Xiaofeng, Lin, Daiying and Wu, Xianheng (2023). Increased glymphatic system activity in patients with mild traumatic brain injury. Frontiers in Neurology, 14 1148878, 1-7. doi: 10.3389/fneur.2023.1148878

Increased glymphatic system activity in patients with mild traumatic brain injury

2023

Journal Article

Distortion‐corrected image reconstruction with deep learning on an MRI‐Linac

Shan, Shanshan, Gao, Yang, Liu, Paul Z. Y., Whelan, Brendan, Sun, Hongfu, Dong, Bin, Liu, Feng and Waddington, David E. J. (2023). Distortion‐corrected image reconstruction with deep learning on an MRI‐Linac. Magnetic Resonance in Medicine, 90 (3), 1-15. doi: 10.1002/mrm.29684

Distortion‐corrected image reconstruction with deep learning on an MRI‐Linac

2023

Journal Article

Affine transformation edited and refined deep neural network for quantitative susceptibility mapping

Xiong, Zhuang, Gao, Yang, Liu, Feng and Sun, Hongfu (2023). Affine transformation edited and refined deep neural network for quantitative susceptibility mapping. NeuroImage, 267 119842, 1-9. doi: 10.1016/j.neuroimage.2022.119842

Affine transformation edited and refined deep neural network for quantitative susceptibility mapping

2022

Journal Article

Quantitative susceptibility mapping changes relate to gait issues in Parkinson’s Disease

Nathoo, Nabeela, Gee, Myrlene, Nelles, Krista, Burt, Jacqueline, Sun, Hongfu, Seres, Peter, Wilman, Alan H., Beaulieu, Christian, Ba, Fang and Camicioli, Richard (2022). Quantitative susceptibility mapping changes relate to gait issues in Parkinson’s Disease. Canadian Journal of Neurological Sciences, 50 (6) PII S031716712200316X, 1-8. doi: 10.1017/cjn.2022.316

Quantitative susceptibility mapping changes relate to gait issues in Parkinson’s Disease

2022

Journal Article

Detecting monocyte trafficking in an animal model of glioblastoma using R2* and quantitative susceptibility mapping

Yang, Runze, Hamilton, A. Max, Sun, Hongfu, Rawji, Khalil S., Sarkar, Susobhan, Mirzaei, Reza, Pike, G. Bruce, Yong, V. Wee. and Dunn, Jeff F. (2022). Detecting monocyte trafficking in an animal model of glioblastoma using R2* and quantitative susceptibility mapping. Cancer Immunology, Immunotherapy, 72 (3), 733-742. doi: 10.1007/s00262-022-03297-z

Detecting monocyte trafficking in an animal model of glioblastoma using R2* and quantitative susceptibility mapping

2022

Journal Article

Brain volume and magnetic susceptibility differences in children and adolescents with prenatal alcohol exposure

Nakhid, Daphne, McMorris, Carly, Sun, Hongfu, Gibbard, William Benton, Tortorelli, Christina and Lebel, Catherine (2022). Brain volume and magnetic susceptibility differences in children and adolescents with prenatal alcohol exposure. Alcoholism: Clinical and Experimental Research, 46 (10), 1797-1807. doi: 10.1111/acer.14928

Brain volume and magnetic susceptibility differences in children and adolescents with prenatal alcohol exposure

2022

Journal Article

Quantitative susceptibility-weighted imaging in presence of strong susceptibility sources: application to hemorrhage

De, Ashmita, Sun, Hongfu, Emery, Derek J., Butcher, Kenneth S. and Wilman, Alan H. (2022). Quantitative susceptibility-weighted imaging in presence of strong susceptibility sources: application to hemorrhage. Magnetic Resonance Imaging, 92, 224-231. doi: 10.1016/j.mri.2022.06.010

Quantitative susceptibility-weighted imaging in presence of strong susceptibility sources: application to hemorrhage

2022

Journal Article

Instant tissue field and magnetic susceptibility mapping from MRI raw phase using Laplacian enhanced deep neural networks

Gao, Yang, Xiong, Zhuang, Fazlollahi, Amir, Nestor, Peter J., Vegh, Viktor, Nasrallah, Fatima, Winter, Craig, Pike, G. Bruce, Crozier, Stuart, Liu, Feng and Sun, Hongfu (2022). Instant tissue field and magnetic susceptibility mapping from MRI raw phase using Laplacian enhanced deep neural networks. NeuroImage, 259 119410, 1-13. doi: 10.1016/j.neuroimage.2022.119410

Instant tissue field and magnetic susceptibility mapping from MRI raw phase using Laplacian enhanced deep neural networks