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2026

Journal Article

Balancing gain and diversity: optimal contribution selection for sustainable genetic improvement in sugarcane

Vo Van‐Zivkovic, Natalya, Hayes, Ben J., Aitken, Karen, Dinglasan, Eric, Morgan, Terry and Yadav, Seema (2026). Balancing gain and diversity: optimal contribution selection for sustainable genetic improvement in sugarcane. The Plant Genome, 19 (4) e70314, e70314-e70314. doi: 10.1002/tpg2.70314

Balancing gain and diversity: optimal contribution selection for sustainable genetic improvement in sugarcane

2026

Journal Article

Local genomic estimates provide a powerful framework for haplotype discovery

Shaffer, Will, Papin, Victor, Yadav, Seema, Voss-Fels, Kai P., Hickey, Lee T., Hayes, Ben J. and Dinglasan, Eric G. (2026). Local genomic estimates provide a powerful framework for haplotype discovery. Applied Plant Science 100002, 100002. doi: 10.1016/j.apsx.2026.100002

Local genomic estimates provide a powerful framework for haplotype discovery

2026

Journal Article

Genetic legacy effects in a mungbean-wheat rotation reveal potential to breed for system-level yield gains

Van Haeften, Shanice, Brunner, Stephanie M., Dinglasan, Eric, Fabreag, Edward, Eyre, Joseph, Mens, Celine, Hayes, Ben J., Udvardi, Michael, Alahmad, Samir, Eglinton, Mitchell, McQuinn, Ryan, Ryan, Merrill, van der Meer, Sarah, Smith, Millicent R. and Hickey, Lee T. (2026). Genetic legacy effects in a mungbean-wheat rotation reveal potential to breed for system-level yield gains. Plant Communications 102081, 102081. doi: 10.1016/j.xplc.2026.102081

Genetic legacy effects in a mungbean-wheat rotation reveal potential to breed for system-level yield gains

2026

Journal Article

Haplotype-based nested association mapping for net form net blotch response in Australian barley

Nadeem, Muhammad, Liu, Dan, Snyman, Lisle, Hickey, Lee and Dinglasan, Eric (2026). Haplotype-based nested association mapping for net form net blotch response in Australian barley. Theoretical and Applied Genetics, 139 (9) 233, 9. doi: 10.1007/s00122-026-05328-0

Haplotype-based nested association mapping for net form net blotch response in Australian barley

2026

Other Outputs

Comparison of localGEBV and optimal haplotype stacking fitness functions using a novel R package: HapSelect

Shaffer, Will, Papin, Victor, Carter, Zane, Brunner, Stephanie, Jingyang, Tong, Villiers, Kira, Robinson, Hannah, Voss-Fels, Kai, Hayes, Ben, Hickey, Lee and Dinglasan, Eric (2026). Comparison of localGEBV and optimal haplotype stacking fitness functions using a novel R package: HapSelect. doi: 10.64898/2026.07.08.737160

Comparison of localGEBV and optimal haplotype stacking fitness functions using a novel R package: HapSelect

2026

Journal Article

Genetic architecture of barley resistance to net blotch and leaf scald: QTL integration and candidate gene identification

Liu, Dan, Tong, Jingyang, Gamaralalage, Dilani Jambuthenne, Periyannan, Sambasivam, Hayes, Ben, Hickey, Lee and Dinglasan, Eric (2026). Genetic architecture of barley resistance to net blotch and leaf scald: QTL integration and candidate gene identification. Plant Stress, 22 101461, 1-15. doi: 10.1016/j.stress.2026.101461

Genetic architecture of barley resistance to net blotch and leaf scald: QTL integration and candidate gene identification

2026

Conference Publication

Integrating field and controlled environment phenotyping to fast-track heat tolerance in chickpea

Smith, Millicent, Van Haeften, Shanice, Jamie, Callum, Meijer, Lotus, Hickey, Lee, Dinglasan, Eric, Papin, Victor, Chenu, Karine, Lake, Lachlan, Sadras, Victor, Chauhan, Yash, Sands, Douglas, Donaldson, Cassandra, Hobson, Kristy, Clifton, Mitch and Dron, Nicole (2026). Integrating field and controlled environment phenotyping to fast-track heat tolerance in chickpea. International Legume Society Conference, Dubrovnik, Croatia, 8-12 June 2026.

Integrating field and controlled environment phenotyping to fast-track heat tolerance in chickpea

2026

Conference Publication

Dissecting genetic and environmental regulation of flowering to enable climate-resilient mungbean breeding

Dudley, Caitlin, Van Haeften, Shanice, Alahmad, Samir, Dinglasan, Eric, Hickey, Lee, Robinson, Hannah, Beveridge, Christine, Udvardi, Michael, Noble, Thomas, Massel, Karen, Dun, Elizabeth and Smith, Millicent (2026). Dissecting genetic and environmental regulation of flowering to enable climate-resilient mungbean breeding. 5th International Legume Society Conference, Dubrovnik, Croatia, 8-12 June 2026.

Dissecting genetic and environmental regulation of flowering to enable climate-resilient mungbean breeding

2026

Conference Publication

Breeding beyond the plot: leveraging rotational genetics to improve wheat performance and farming system sustainability

Smith, Millicent, Van Haeften, Shanice, Brunner, Stephanie, Dinglasan, Eric, Fabreag, Edward, Eyre, Joe, Mens, Celine, Hayes, Ben, Udvardi, Michael, Alahmad, Samir, Eglinton, Mitchell, McQuinn, Ryan, Ryan, Merrill, van der Meer, Sarah and Hickey, Lee (2026). Breeding beyond the plot: leveraging rotational genetics to improve wheat performance and farming system sustainability. 4th International Wheat Congress, Bologna, Italy, 25-29 May 2026.

Breeding beyond the plot: leveraging rotational genetics to improve wheat performance and farming system sustainability

2026

Journal Article

Advancing rust resistance in elite wheat with haplotype mapping and a novel introgression strategy

Yadav, Seema, Dillon, Shannon, McNeil, Meredith, Dinglasan, Eric, Jambuthenne, Dilani, Mago, Rohit, Dodds, Peter N., Hickey, Lee T. and Hayes, Ben J. (2026). Advancing rust resistance in elite wheat with haplotype mapping and a novel introgression strategy. Journal of Experimental Botany, 77 (9) erag073, 2773-2792. doi: 10.1093/jxb/erag073

Advancing rust resistance in elite wheat with haplotype mapping and a novel introgression strategy

2026

Journal Article

Toward sustainable barley protection: Integrating traditional practices and genomic innovations against Pyrenophora teres

Azeem, Muhammad Atif, Dinglasan, Eric, Zhao, Chenchen and Zhou, Meixue (2026). Toward sustainable barley protection: Integrating traditional practices and genomic innovations against Pyrenophora teres. Plant Stress, 20 101303, 101303-20. doi: 10.1016/j.stress.2026.101303

Toward sustainable barley protection: Integrating traditional practices and genomic innovations against Pyrenophora teres

2026

Conference Publication

Hyper-recombination as a strategy to extend genomic prediction accuracy across generations

Shaffer, Will, Dinglasan, Eric, Villiers, Kira, Papin, Victor, Massel, Karen and Hickey, Lee (2026). Hyper-recombination as a strategy to extend genomic prediction accuracy across generations. World Congress on Genetics Applied to Livestock Production, Madison, WI United Stated, 12-17 July 2026. Ames, IA United States: World Congress on Genetics Applied to Livestock Production Digital Archive. doi: 10.31274/wcgalp.24037

Hyper-recombination as a strategy to extend genomic prediction accuracy across generations

2026

Journal Article

Exploring standing genetic variation for barley leaf rust resistance in Australian breeding panel

Pandit, Madhav, Dracatos, Peter, Periyannan, Sambasivam, Lam, Yasmine, Brunner, Stephanie M., Honse, Takaaki, Tong, Jingyang, Dinglasan, Eric, Ganesalingam, Dini, Moody, David, Baraibar, Silvina, Hickey, Lee, Alahmad, Samir and Robinson, Hannah (2026). Exploring standing genetic variation for barley leaf rust resistance in Australian breeding panel. Theoretical and Applied Genetics, 139 (1) 31, 1-16. doi: 10.1007/s00122-025-05122-4

Exploring standing genetic variation for barley leaf rust resistance in Australian breeding panel

2025

Conference Publication

Accelerating genetic gain in macadamia through AI integrated parent selection and genomic prediction

Lin, Ni-Jung, Dhakal Poudel, Pragya, Mason, Patrick, Dinglasan, Eric, Wang, Sen, Hickey, Lee, Topp, Bruce and Alam, Mobashwer (2025). Accelerating genetic gain in macadamia through AI integrated parent selection and genomic prediction. TropAg25, Brisbane, QLD Australia, 11-13 November 2025.

Accelerating genetic gain in macadamia through AI integrated parent selection and genomic prediction

2025

Conference Publication

Haplotype stacking unlocks the potential of arid-adapted germplasm for higher yield

Papin, Victor, Barmukh, Rutwik, Dinglasan, Eric G., Shaffer, Will, Smith, Millicent, Hayes, Ben J., Hamwieh, Aladdin, Instanbuli, Tawffiq, Maalouf, Fouad, Aklinade, Oluwaseun J., Varshney, Rajeev K. and Hickey, Lee T. (2025). Haplotype stacking unlocks the potential of arid-adapted germplasm for higher yield. 5th TropAg Conference, Brisbane, QLD, Australia, 11 - 13 November 2025.

Haplotype stacking unlocks the potential of arid-adapted germplasm for higher yield

2025

Journal Article

Time to flowering and flowering duration in mungbean are unrelated physiological traits with independent genetic controls

Dudley, Caitlin, Van Haeften, Shanice, Alahmad, Samir, Dinglasan, Eric, Hickey, Lee T., Robinson, Hannah, Beveridge, Christine, Udvardi, Michael, Noble, Thomas, Massel, Karen, Dun, Elizabeth A. and Smith, Millicent R. (2025). Time to flowering and flowering duration in mungbean are unrelated physiological traits with independent genetic controls. Journal Of Experimental Botany, 76 (18) eraf222, 5528-5541. doi: 10.1093/jxb/eraf222

Time to flowering and flowering duration in mungbean are unrelated physiological traits with independent genetic controls

2025

Journal Article

Haplotype stacking to improve stability of stripe rust resistance in wheat

Tong, Jingyang, Tarekegn, Zerihun T., Jambuthenne, Dilani, Robinson, Hannah, Pandit, Madhav, Villiers, Kira, Periyannan, Sambasivam, Hickey, Lee, Dinglasan, Eric and Hayes, Ben J. (2025). Haplotype stacking to improve stability of stripe rust resistance in wheat. Theoretical and Applied Genetics, 138 (11) 267, 1-19. doi: 10.1007/s00122-025-05045-0

Haplotype stacking to improve stability of stripe rust resistance in wheat

2025

Other Outputs

Local genomic estimates provide a powerful framework for haplotype discovery

Shaffer, Will, Papin, Victor, Yadav, Seema, Voss-Fels, Kai P., Hickey, Lee T., Hayes, Ben J. and Dinglasan, Eric G. (2025). Local genomic estimates provide a powerful framework for haplotype discovery. doi: 10.1101/2025.08.28.672830

Local genomic estimates provide a powerful framework for haplotype discovery

2025

Journal Article

Haplotype‐based insights into seminal root angle in barley

Aldiss, Zachary, Lam, Yasmine, Baraibar, Silvina, Van Der Meer, Sarah, Dinglasan, Eric, Massel, Karen, Crisp, Peter, Godwin, Ian, Borrell, Andrew, Moody, David, Hickey, Lee and Robinson, Hannah (2025). Haplotype‐based insights into seminal root angle in barley. The Plant Genome, 18 (3) e70088, 1-15. doi: 10.1002/tpg2.70088

Haplotype‐based insights into seminal root angle in barley

2025

Journal Article

Optimising parent selection in plant breeding: comparing metaheuristic algorithms for genotype building

Yadav, S., Dillon, S., McNeil, M., Dinglasan, E., Mago, R., Dodds, P., Hickey, L. and Hayes, B. J. (2025). Optimising parent selection in plant breeding: comparing metaheuristic algorithms for genotype building. Theoretical and Applied Genetics, 138 (9) 242, 1-20. doi: 10.1007/s00122-025-05028-1

Optimising parent selection in plant breeding: comparing metaheuristic algorithms for genotype building