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2025

Journal Article

Global transcriptional reprogramming by cytomegalovirus infection suppresses MHC class II antigen presentation while enhancing migration machinery in murine dendritic cells

Parry, Rhys H, McMillan, Christopher L D, Bruce, Kimberley L and Farrell, Helen E (2025). Global transcriptional reprogramming by cytomegalovirus infection suppresses MHC class II antigen presentation while enhancing migration machinery in murine dendritic cells. Microbial genomics, 11 (11). doi: 10.1099/mgen.0.001563

Global transcriptional reprogramming by cytomegalovirus infection suppresses MHC class II antigen presentation while enhancing migration machinery in murine dendritic cells

2025

Journal Article

Mounting evidence for an expanded host range of influenza B viruses

Koutsakos, Marios, Parry, Rhys H. and Wille, Michelle (2025). Mounting evidence for an expanded host range of influenza B viruses. Viruses, 17 (12) 1528, 1528. doi: 10.3390/v17121528

Mounting evidence for an expanded host range of influenza B viruses

2025

Journal Article

Genomic analysis of Androctonus mauritanicus toursvirus: first evidence of Ascoviridae in arachnids

El Ghoubali, Douae, Parry, Rhys H., Pirro, Stacy, Hamdi, Salsabil, Habib, Nihal, El Jaoudi, Rachid, Bousta, Dalila, Barrijal, Said, Nejjari, Chakib, Al Idrissi, Najib, Belyamani, Lahcen and Ghazal, Hassan (2025). Genomic analysis of Androctonus mauritanicus toursvirus: first evidence of Ascoviridae in arachnids. Virus genes. doi: 10.1007/s11262-025-02197-5

Genomic analysis of Androctonus mauritanicus toursvirus: first evidence of Ascoviridae in arachnids

2025

Journal Article

Vaccine-induced and hybrid immunity against SARS-CoV-2 variants of concern in two cohorts in Queensland, Australia (2021-2022)

Parry, Rhys H., Shang, Yingjun, Sng, Julian D. J., McMillan, Christopher L. D., Modhiran, Naphak, Amarilla, Alberto A., Isaacs, Ariel, Liang, Benjamin, Muller, David A., Rawle, Daniel J., Suhrbier, Andreas, Anderson, Stevie, Kelly, Samuel, Watterson, Daniel, Burr, Lucy D. and Khromykh, Alexander A. (2025). Vaccine-induced and hybrid immunity against SARS-CoV-2 variants of concern in two cohorts in Queensland, Australia (2021-2022). Journal of Medical Virology, 97 (10) e70642, 1-15. doi: 10.1002/jmv.70642

Vaccine-induced and hybrid immunity against SARS-CoV-2 variants of concern in two cohorts in Queensland, Australia (2021-2022)

2025

Journal Article

Transcriptomic response of mosquitoes to Japanese encephalitis virus and identification of its potential entry factors

Hussain, Mazhar, Etebari, Kayvan, Parry, Rhys H., Khromykh, Alexander A., Hugo, Leon E. and Asgari, Sassan (2025). Transcriptomic response of mosquitoes to Japanese encephalitis virus and identification of its potential entry factors. npj Viruses, 3 (1) 68, 68-1. doi: 10.1038/s44298-025-00151-8

Transcriptomic response of mosquitoes to Japanese encephalitis virus and identification of its potential entry factors

2025

Journal Article

A nanobody-based therapeutic targeting Nipah virus limits viral escape

Isaacs, Ariel, Nieto, Guillermo Valenzuela, Zhang, Xinghai, Modhiran, Naphak, Barr, Jennifer, Thakur, Nazia, Low, Yu Shang, Parry, Rhys H., Barnes, James B., Jara, Ronald, Himelreichs, Johanna, Yao, Yanfeng, Deride, Camila, Barthou-Gatica, Barbara, Salinas-Rebolledo, Constanza, Ehrenfeld, Pamela, Hen, Jun Jet, Hayes, Noah, Paramitha, Devina, Morgan, Mahali S., McMillan, Christopher L. D., Jones, Martina L., Munro, Trent P., Khromykh, Alexander A., Reading, Patrick C., Young, Paul R., Chappell, Keith J., Shi, Yi, Bailey, Dalan ... Watterson, Daniel (2025). A nanobody-based therapeutic targeting Nipah virus limits viral escape. Nature Structural and Molecular Biology, 32 (10), 1920-1931. doi: 10.1038/s41594-025-01598-2

A nanobody-based therapeutic targeting Nipah virus limits viral escape

2025

Journal Article

Tunicate metatranscriptomes reveal evidence of ancient co-divergence between viruses and their hosts

Petrone, Mary E., Grove, Joe, Parry, Rhys H., Van Brussel, Kate, Mifsud, Jonathon C.O., Dindar, Zuhairah, Mei, Shi-qiang, Shi, Mang, Turnbull, Olivia M.H., Marzinelli, Ezequiel M. and Holmes, Edward C. (2025). Tunicate metatranscriptomes reveal evidence of ancient co-divergence between viruses and their hosts. Current Biology, 35 (13), 3035-3047. doi: 10.1016/j.cub.2025.05.032

Tunicate metatranscriptomes reveal evidence of ancient co-divergence between viruses and their hosts

2025

Journal Article

Twelfth scientific biennial meeting of the Australasian Virology Society: AVS12 2024

Monson, Ebony A., Loterio, Robson K., Roby, Justin A., Adhikari, Anurag, Bull, Rowena A., Carr, Jill M., Chatzileontiadou, Demetra S. M., Cheng, Colin X., Coulibaly, Fasséli, Davis, Samantha K., Deerain, Joshua M., Douglas, Mark W., Drummer, Heidi E., Eyre, Nicholas S., Freppel, Wesley, Gowripalan, Anjali, Grant, Emma J., Gras, Stephanie, Guthmiller, Jenna J., Herrero, Lara J., Hesping, Eva, Horsburgh, Bethany A., Hyde, Jennifer L., Koutsakos, Marios, Mackenzie, Jason M., Mahar, Jackie E., McCoullough, Laura C., McMillan, Christopher L. D., Modhiran, Naphak ... Tate, Michelle D. (2025). Twelfth scientific biennial meeting of the Australasian Virology Society: AVS12 2024. Journal of Virology, 99 (5), e0225524. doi: 10.1128/jvi.02255-24

Twelfth scientific biennial meeting of the Australasian Virology Society: AVS12 2024

2025

Journal Article

Discovery of additional genomic segments reveals the fluidity of jingmenvirus genomic organisation

Valle, Coralie, Parry, Rhys H., Coutard, Bruno and Colmant, Agathe M. G. (2025). Discovery of additional genomic segments reveals the fluidity of jingmenvirus genomic organisation. Virus Evolution, 11 (1) veaf023, 1-15. doi: 10.1093/ve/veaf023

Discovery of additional genomic segments reveals the fluidity of jingmenvirus genomic organisation

2025

Journal Article

The catalytic tetrad of Aedes aegypti Argonaute 2 is critical for the antiviral activity of the exogenous siRNA pathway

Dummunee, Krittika, Parry, Rhys H., Redecke, Lars, Varjak, Margus, Brennan, Benjamin, Kohl, Alain and McFarlane, Melanie (2025). The catalytic tetrad of Aedes aegypti Argonaute 2 is critical for the antiviral activity of the exogenous siRNA pathway. Journal of Biological Chemistry, 301 (4) 108332, 108332. doi: 10.1016/j.jbc.2025.108332

The catalytic tetrad of Aedes aegypti Argonaute 2 is critical for the antiviral activity of the exogenous siRNA pathway

2025

Journal Article

Skin patch delivery of a SARS-CoV-2 Spike DNA vaccine produces broad neutralising antibody responses

McMillan, Christopher L.D., Corner, Andrea V., Wijesundara, Danushka K., Choo, Jovin J.Y., Pittayakhajonwut, Daraporn, Poredi, Indrajeet, Parry, Rhys H., Bindra, Guneet K., Bruce, Kimberley, Khromykh, Alexander A., Fernando, Germain J.P., Dapremont, Laurent, Young, Paul R. and Muller, David A. (2025). Skin patch delivery of a SARS-CoV-2 Spike DNA vaccine produces broad neutralising antibody responses. Heliyon, 11 (4) e42533, e42533. doi: 10.1016/j.heliyon.2025.e42533

Skin patch delivery of a SARS-CoV-2 Spike DNA vaccine produces broad neutralising antibody responses

2025

Journal Article

The PAZ domain of Aedes aegypti Dicer 2 is critical for accurate and high-fidelity size determination of virus-derived small interfering RNAs

Reuter, Melinda, Parry, Rhys H., McDonald, Melanie, Gestuveo, Rommel J., Arif, Rozeena, Khromykh, Alexander A., Brennan, Benjamin, Varjak, Margus, Castello, Alfredo, Redecke, Lars, Schnettler, Esther and Kohl, Alain (2025). The PAZ domain of Aedes aegypti Dicer 2 is critical for accurate and high-fidelity size determination of virus-derived small interfering RNAs. RNA, 31 (5), 679-691. doi: 10.1261/rna.080149.124

The PAZ domain of Aedes aegypti Dicer 2 is critical for accurate and high-fidelity size determination of virus-derived small interfering RNAs

2025

Journal Article

Henipavirus in northern short-tailed shrew, Alabama, USA

Parry, Rhys H., Yamada, KayLene Y.H., Hood, Wendy R., Zhao, Yang, Lu, Jinlong Y., Seluanov, Andrei, Gorbunova, Vera, Modhiran, Naphak, Watterson, Daniel and Isaacs, Ariel (2025). Henipavirus in northern short-tailed shrew, Alabama, USA. Emerging Infectious Diseases, 31 (2), 392-394. doi: 10.3201/eid3102.241155

Henipavirus in northern short-tailed shrew, Alabama, USA

2025

Journal Article

Author Correction: A roadmap for equitable reuse of public microbiome data (Nature Microbiology, (2025), 10, 10, (2384-2395), 10.1038/s41564-025-02116-2)

Hug, Laura A., Hatzenpichler, Roland, Moraru, Cristina, Soares, André R., Meyer, Folker, Heyder, Anke, Zwirzitz, B., Ziels, R. M., Zhu, J., Zhang, Y., Xiu, W., Wu, M., Woyke, T., Worden, A. Z., Williams, T. A., Williams, C. L., Wichels, A., Weissman, J. L., Weiss, L. C., Weir, T., Wegner, C. E., Wang, Y., Wang, S., Walsh, C. J., Wagner, M., von Meijenfeldt, F. A.B., Vierheilig, J., Vázquez-Campos, X., Valentin-Alvarado, L. E. ... Probst, Alexander J. (2025). Author Correction: A roadmap for equitable reuse of public microbiome data (Nature Microbiology, (2025), 10, 10, (2384-2395), 10.1038/s41564-025-02116-2). Nature Microbiology. doi: 10.1038/s41564-025-02212-3

Author Correction: A roadmap for equitable reuse of public microbiome data (Nature Microbiology, (2025), 10, 10, (2384-2395), 10.1038/s41564-025-02116-2)

2024

Journal Article

The RNA interference response to alphanodavirus replication in Phlebotomus papatasi sand fly cells

Alexander, Akira J. T., Parry, Rhys H., Ratinier, Maxime, Arnaud, Frédérick and Kohl, Alain (2024). The RNA interference response to alphanodavirus replication in Phlebotomus papatasi sand fly cells. Insect Molecular Biology, 33 (6), 687-696. doi: 10.1111/imb.12932

The RNA interference response to alphanodavirus replication in Phlebotomus papatasi sand fly cells

2024

Journal Article

Dicer-2 mutations in Aedes aegypti cells lead to a diminished antiviral function against Rift Valley fever virus and Bunyamwera virus infection

Dornbusch, Susann, Reuter, Melinda, Parry, Rhys H., Stern, Michael, Becker, Stefanie C. and Schnettler, Esther (2024). Dicer-2 mutations in Aedes aegypti cells lead to a diminished antiviral function against Rift Valley fever virus and Bunyamwera virus infection. Journal of General Virology, 105 (11) 002046. doi: 10.1099/jgv.0.002046

Dicer-2 mutations in Aedes aegypti cells lead to a diminished antiviral function against Rift Valley fever virus and Bunyamwera virus infection

2024

Journal Article

No evidence that mutations in SARS-CoV-2 variants of concern derive from homologous fragments in gut microbiota

Parry, Rhys H., Lytras, Spyros, Petrone, Mary E., Wille, Michelle, Crits-Christoph, Alexander, Gifford, Robert J., Saito, Akatsuki, Smura, Teemu and Peacock, Thomas P. (2024). No evidence that mutations in SARS-CoV-2 variants of concern derive from homologous fragments in gut microbiota. Journal of Virology, 98 (12), 1-2. doi: 10.1128/jvi.01468-24

No evidence that mutations in SARS-CoV-2 variants of concern derive from homologous fragments in gut microbiota

2024

Journal Article

Synthetic recovery of Yada Yada virus expands insect-specific alphavirus knowledge and facilitates production of chimeric viruses

Bell, Mikaela G., Parry, Rhys H., Lee, Tricia S. E., Habarugira, Gervais, McMahon, Isabella E., Thompson, Madeline A., Modhiran, Naphak, Watterson, Daniel, Batovska, Jana, Lynch, Stacey E., Hall, Roy A., Harrison, Jessica J. and Hobson-Peters, Jody (2024). Synthetic recovery of Yada Yada virus expands insect-specific alphavirus knowledge and facilitates production of chimeric viruses. npj Viruses, 2 (1) 45, 1-14. doi: 10.1038/s44298-024-00052-2

Synthetic recovery of Yada Yada virus expands insect-specific alphavirus knowledge and facilitates production of chimeric viruses

2024

Journal Article

Diverse RNA viruses of parasitic nematodes can elicit antibody responses in vertebrate hosts

Quek, Shannon, Hadermann, Amber, Wu, Yang, De Coninck, Lander, Hegde, Shrilakshmi, Boucher, Jordan R., Cresswell, Jessica, Foreman, Ella, Steven, Andrew, LaCourse, E. James, Ward, Stephen A., Wanji, Samuel, Hughes, Grant L., Patterson, Edward I., Wagstaff, Simon C., Turner, Joseph D., Parry, Rhys H., Kohl, Alain, Heinz, Eva, Otabil, Kenneth Bentum, Matthijnssens, Jelle, Colebunders, Robert and Taylor, Mark J. (2024). Diverse RNA viruses of parasitic nematodes can elicit antibody responses in vertebrate hosts. Nature Microbiology, 9 (10), 2488-2505. doi: 10.1038/s41564-024-01796-6

Diverse RNA viruses of parasitic nematodes can elicit antibody responses in vertebrate hosts

2024

Journal Article

Detection of Dengue virus 1 and mammalian orthoreovirus 3, with novel reassortments, in a South African family returning from Thailand, 2017

Jansen van Vuren, Petrus, Parry, Rhys H. and Pawęska, Janusz T. (2024). Detection of Dengue virus 1 and mammalian orthoreovirus 3, with novel reassortments, in a South African family returning from Thailand, 2017. Viruses, 16 (8) 1274, 1274. doi: 10.3390/v16081274

Detection of Dengue virus 1 and mammalian orthoreovirus 3, with novel reassortments, in a South African family returning from Thailand, 2017