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2024

Journal Article

Modulation of endoplasmic reticulum stress response pathways by respiratory viruses

Macauslane, Kyle L., Pegg, Cassandra L., Short, Kirsty R. and Schulz, Benjamin L. (2024). Modulation of endoplasmic reticulum stress response pathways by respiratory viruses. Critical Reviews in Microbiology, 50 (5), 750-768. doi: 10.1080/1040841x.2023.2274840

Modulation of endoplasmic reticulum stress response pathways by respiratory viruses

2024

Journal Article

Post-acute sequelae of SARS-CoV-2 cardiovascular symptoms are associated with trace-level cytokines that affect cardiomyocyte function

Sinclair, Jane E., Vedelago, Courtney, Ryan, Feargal J., Carney, Meagan, Redd, Meredith A., Lynn, Miriam A., Grubor-Bauk, Branka, Cao, Yuanzhao, Henders, Anjali K., Chew, Keng Yih, Gilroy, Deborah, Greaves, Kim, Labzin, Larisa, Ziser, Laura, Ronacher, Katharina, Wallace, Leanne M., Zhang, Yiwen, Macauslane, Kyle, Ellis, Daniel J., Rao, Sudha, Burr, Lucy, Bain, Amanda, Karawita, Anjana, Schulz, Benjamin L., Li, Junrong, Lynn, David J., Palpant, Nathan, Wuethrich, Alain, Trau, Matt and Short, Kirsty R. (2024). Post-acute sequelae of SARS-CoV-2 cardiovascular symptoms are associated with trace-level cytokines that affect cardiomyocyte function. Nature Microbiology, 9 (12), 1-13. doi: 10.1038/s41564-024-01838-z

Post-acute sequelae of SARS-CoV-2 cardiovascular symptoms are associated with trace-level cytokines that affect cardiomyocyte function

2024

Journal Article

Persistent viral RNA and protein contribute to post-acute pathology

Chew, Keng Yih and Short, Kirsty R. (2024). Persistent viral RNA and protein contribute to post-acute pathology. Nature Microbiology, 9 (11), 2797-2798. doi: 10.1038/s41564-024-01837-0

Persistent viral RNA and protein contribute to post-acute pathology

2024

Journal Article

High-Throughput Synthesis and Evaluation of Antiviral Copolymers for Enveloped Respiratory Viruses

Mengist, Hylemariam Mihiretie, Denman, Paul, Frost, Charlotte, Sng, Julian D.J., Logan, Saskia, Yarlagadda, Tejasri, Spann, Kirsten M., Barner, Leonie, Fairfull-Smith, Kathryn E, Short, Kirsty R. and Boase, Nathan RB (2024). High-Throughput Synthesis and Evaluation of Antiviral Copolymers for Enveloped Respiratory Viruses. Biomacromolecules, 25 (11), 7377-7391. doi: 10.1021/acs.biomac.4c01049

High-Throughput Synthesis and Evaluation of Antiviral Copolymers for Enveloped Respiratory Viruses

2024

Journal Article

High glycaemic variability is associated with a reduced T cell cytokine response to influenza A virus

Zhen Wei, Marcus Tong, Hulme, Katina D., Law, Soi Cheng, Noye, Ellesandra, Dorey, Emily S., Chew, Keng Yih, Rowntree, Louise C., van de Sandt, Carolien E., Kedzierska, Katherine, Goeijenbier, Marco, Ronacher, Katharina, Alzaid, Fawaz, Julla, Jean-Baptiste, Riveline, Jean-Pierre, Lineburg, Katie, Smith, Corey, Grant, Emma J., Gras, Stephanie, Gallo, Linda A., Barett, Helen L. and Short, Kirsty R. (2024). High glycaemic variability is associated with a reduced T cell cytokine response to influenza A virus. iScience, 27 (11) 111166, 111166. doi: 10.1016/j.isci.2024.111166

High glycaemic variability is associated with a reduced T cell cytokine response to influenza A virus

2024

Conference Publication

Preclinical models of Glycaemic variability recapitulate Clinical Cardiovascular outcomes in Diabetes

Cao, Y., Redd, M., Outhwaite, J., Shim, W., Fang, C., Negi, S., Shen, S., Mizikovsky, D., Chiu, H., Tan, C., Thomas, U., Dragicevic, E., Sng, J., Short, K. and Palpant, N. (2024). Preclinical models of Glycaemic variability recapitulate Clinical Cardiovascular outcomes in Diabetes. 72nd Annual Scientific Meeting of the Cardiac Society of Australia and New Zealand, Perth, WA Australia, 1-4 August 2024. Chatswood, NSW Australia: Elsevier. doi: 10.1016/j.hlc.2024.06.332

Preclinical models of Glycaemic variability recapitulate Clinical Cardiovascular outcomes in Diabetes

2024

Journal Article

Evidence for vagal sensory neural involvement in influenza pathogenesis and disease

Verzele, Nathalie A. J., Chua, Brendon Y., Short, Kirsty R., Moe, Aung Aung Kywe, Edwards, Isaac N., Bielefeldt-Ohmann, Helle, Hulme, Katina D., Noye, Ellesandra C., Tong, Marcus Z. W., Reading, Patrick C., Trewella, Matthew W., Mazzone, Stuart B. and McGovern, Alice E. (2024). Evidence for vagal sensory neural involvement in influenza pathogenesis and disease. PLoS Pathogens, 20 (4) e1011635, e1011635. doi: 10.1371/journal.ppat.1011635

Evidence for vagal sensory neural involvement in influenza pathogenesis and disease

2024

Journal Article

Nasal Delivery of <i>Haemophilus haemolyticus</i> Is Safe, Reduces Influenza Severity, and Prevents Development of Otitis Media in Mice

Scott, Naomi, Martinovich, Kelly M, Granland, Caitlyn M, Seppanen, Elke J, Tjiam, M Christian, de Gier, Camilla, Foo, Edison, Short, Kirsty R, Chew, Keng Yih, Fulurija, Alma, Strickland, Deborah H, Richmond, Peter C and Kirkham, Lea-Ann S (2024). Nasal Delivery of Haemophilus haemolyticus Is Safe, Reduces Influenza Severity, and Prevents Development of Otitis Media in Mice. The Journal of Infectious Diseases, 230 (2), 346-356. doi: 10.1093/infdis/jiae069

Nasal Delivery of <i>Haemophilus haemolyticus</i> Is Safe, Reduces Influenza Severity, and Prevents Development of Otitis Media in Mice

2024

Journal Article

In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection

Tan, Chin Wee, Chen, Jinjin, Liu, Ning, Bhuva, Dharmesh D., Blick, Tony, Monkman, James, Cooper, Caroline, Kharbanda, Malvika, Feher, Kristen, Phipson, Belinda, Killingbeck, Emily E., Pan, Liuliu, Kim, Youngmi, Liang, Yan, Nam, Andy, Leon, Michael, Souza-Fonseca-Guimaraes, Paulo, Nagashima, Seigo, Camargo Martins, Ana Paula, Machado-Souza, Cleber, de Noronha, Lucia, Tang, Benjamin, Short, Kirsty, Fraser, John, Belz, Gabrielle T., Souza-Fonseca-Guimaraes, Fernando, Kulasinghe, Arutha and Davis, Melissa J. (2024). In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection. eBioMedicine, 101 105016, 1-4. doi: 10.1016/j.ebiom.2024.105016

In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection

2024

Journal Article

Presence of procoagulant peripheral blood mononuclear cells in severe COVID-19 patients relate to ventilation perfusion mismatch and precede pulmonary embolism

Raadsen, M., Langerak, T., Du Toit, J., Kruip, M. J.H.A., Aynekulu Mersha, D., De Maat, M. P.M., Vermin, B., Van den Akker, J. P.C., Schmitz, K. S., Bakhtiari, K., Meijers, J. C.M., van Gorp, E. C.M., Short, K. R., Haagmans, B., de Vries, R. D., Gommers, D. A.M.P.J., Endeman, H. and Goeijenbier, M. (2024). Presence of procoagulant peripheral blood mononuclear cells in severe COVID-19 patients relate to ventilation perfusion mismatch and precede pulmonary embolism. Journal of Critical Care, 79 154463. doi: 10.1016/j.jcrc.2023.154463

Presence of procoagulant peripheral blood mononuclear cells in severe COVID-19 patients relate to ventilation perfusion mismatch and precede pulmonary embolism

2024

Journal Article

Host transcriptomics and machine learning for secondary bacterial infections in patients with COVID-19: a prospective, observational cohort study

Carney, Meagan, Pelaia, Tiana Maria, Chew, Tracy, Teoh, Sally, Phu, Amy, Kim, Karan, Wang, Ya, Iredell, Jonathan, Zerbib, Yoann, McLean, Anthony, Schughart, Klaus, Tang, Benjamin, Shojaei, Maryam, Short, Kirsty R, PREDICT-19 consortium and Kulasinghe, Arutha (PREDICT-19 consortium member) (2024). Host transcriptomics and machine learning for secondary bacterial infections in patients with COVID-19: a prospective, observational cohort study. The Lancet Microbe, 5 (3), e272-e281. doi: 10.1016/S2666-5247(23)00363-4

Host transcriptomics and machine learning for secondary bacterial infections in patients with COVID-19: a prospective, observational cohort study

2024

Journal Article

Increasing HbA1c is associated with reduced CD8+ T cell functionality in response to influenza virus in a TCR-dependent manner in individuals with diabetes mellitus

Hulme, Katina D., Tong, Zhen Wei Marcus, Rowntree, Louise C., van de Sandt, Carolien E., Ronacher, Katharina, Grant, Emma J., Dorey, Emily S., Gallo, Linda A., Gras, Stephanie, Kedzierska, Katherine, Barrett, Helen L. and Short, Kirsty R. (2024). Increasing HbA1c is associated with reduced CD8+ T cell functionality in response to influenza virus in a TCR-dependent manner in individuals with diabetes mellitus. Cellular and Molecular Life Sciences, 81 (1) 35. doi: 10.1007/s00018-023-05010-4

Increasing HbA1c is associated with reduced CD8+ T cell functionality in response to influenza virus in a TCR-dependent manner in individuals with diabetes mellitus

2024

Journal Article

Cardiac human bitter taste receptors contain naturally occurring variants that alter function

Bloxham, Conor J., Hulme, Katina D., Fierro, Fabrizio, Fercher, Christian, Pegg, Cassandra L., O'Brien, Shannon L., Foster, Simon R., Short, Kirsty R., Furness, Sebastian G. B., Reichelt, Melissa E., Niv, Masha Y. and Thomas, Walter G. (2024). Cardiac human bitter taste receptors contain naturally occurring variants that alter function. Biochemical Pharmacology, 219 115932, 115932. doi: 10.1016/j.bcp.2023.115932

Cardiac human bitter taste receptors contain naturally occurring variants that alter function

2024

Journal Article

Whole transcriptome profiling of placental pathobiology in SARS‐CoV‐2 pregnancies identifies placental dysfunction signatures

Stylianou, Nataly, Sebina, Ismail, Matigian, Nicholas, Monkman, James, Doehler, Hadeel, Röhl, Joan, Allenby, Mark, Nam, Andy, Pan, Liuliu, Rockstroh, Anja, Sadeghirad, Habib, Chung, Kimberly, Sobanski, Thais, O'Byrne, Ken, Almeida, Ana Clara Simoes Florido, Rebutini, Patricia Zadorosnei, Machado‐Souza, Cleber, Stonoga, Emanuele Therezinha Schueda, Warkiani, Majid E, Salomon, Carlos, Short, Kirsty, McClements, Lana, de Noronha, Lucia, Huang, Ruby, Belz, Gabrielle T, Souza‐Fonseca‐Guimaraes, Fernando, Clifton, Vicki and Kulasinghe, Arutha (2024). Whole transcriptome profiling of placental pathobiology in SARS‐CoV‐2 pregnancies identifies placental dysfunction signatures. Clinical & Translational Immunology, 13 (2) e1488, e1488. doi: 10.1002/cti2.1488

Whole transcriptome profiling of placental pathobiology in SARS‐CoV‐2 pregnancies identifies placental dysfunction signatures

2023

Journal Article

Elevated BMI reduces the humoral response to SARS‐CoV‐2 infection

Tong, Marcus Z. W., Sng, Julian D. J., Carney, Meagan, Cooper, Lucy, Brown, Samuel, Lineburg, Katie E., Chew, Keng Yih, Collins, Neve, Ignacio, Kirsten, Airey, Megan, Burr, Lucy, Joyce, Briony A., Jayasinghe, Dhilshan, McMillan, Christopher L. D., Muller, David A., Adhikari, Anurag, Gallo, Linda A., Dorey, Emily S., Barrett, Helen L., Gras, Stephanie, Smith, Corey, Good‐Jacobson, Kim and Short, Kirsty R. (2023). Elevated BMI reduces the humoral response to SARS‐CoV‐2 infection. Clinical and Translational Immunology, 12 (12) e1476, 1-13. doi: 10.1002/cti2.1476

Elevated BMI reduces the humoral response to SARS‐CoV‐2 infection

2023

Journal Article

Genomic communication via circulating extracellular vesicles and long-term health consequences of COVID-19

Nair, Soumyalekshmi, Nova-Lamperti, Estefania, Labarca, Gonzalo, Kulasinghe, Arutha, Short, Kirsty R., Carrión, Flavio and Salomon, Carlos (2023). Genomic communication via circulating extracellular vesicles and long-term health consequences of COVID-19. Journal of Translational Medicine, 21 (1) 709, 1-19. doi: 10.1186/s12967-023-04552-2

Genomic communication via circulating extracellular vesicles and long-term health consequences of COVID-19

2023

Journal Article

International pediatric COVID-19 severity over the course of the pandemic

Zhu, Yanshan, Almeida, Flávia Jacqueline, Baillie, J Kenneth, Bowen, Asha C, Britton, Philip N, Brizuela, Martin Eduardo, Buonsenso, Danilo, Burgner, David, Chew, Keng Yih, Chokephaibulkit, Kulkanya, Cohen, Cheryl, Cormier, Stephania A, Crawford, Nigel, Curtis, Nigel, Farias, Camila G A, Gilks, Charles F, von Gottberg, Anne, Hamer, Diana, Jarovsky, Daniel, Jassat, Waasila, Jesus, Ana Rita, Kemp, Lisa S, Khumcha, Benjawan, McCallum, Georgina, Miller, Jessica E, Morello, Rosa, Munro, Alasdair P S, Openshaw, Peter J M, Padmanabhan, Srivatsan ... Short, Kirsty R (2023). International pediatric COVID-19 severity over the course of the pandemic. JAMA Pediatrics, 177 (10), 1073-1084. doi: 10.1001/jamapediatrics.2023.3117

International pediatric COVID-19 severity over the course of the pandemic

2023

Journal Article

A robust platform for integrative spatial multi‐omics analysis to map immune responses to SARS‐CoV‐2 infection in lung tissues

Tan, Xiao, Grice, Laura F., Tran, Minh, Mulay, Onkar, Monkman, James, Blick, Tony, Vo, Tuan, Almeida, Ana Clara, da Silva Motta, Jarbas, Fernandes de Moura, Karen, Machado‐Souza, Cleber, Souza‐Fonseca‐Guimaraes, Paulo, Baena, Cristina Pellegrino, de Noronha, Lucia, Guimaraes, Fernanda Simoes Fortes, Luu, Hung N., Drennon, Tingsheng, Williams, Stephen, Stern, Jacob, Uytingco, Cedric, Pan, Liuliu, Nam, Andy, Cooper, Caroline, Short, Kirsty, Belz, Gabrielle T., Souza‐Fonseca‐Guimaraes, Fernando, Kulasinghe, Arutha and Nguyen, Quan (2023). A robust platform for integrative spatial multi‐omics analysis to map immune responses to SARS‐CoV‐2 infection in lung tissues. Immunology, 170 (3), 401-418. doi: 10.1111/imm.13679

A robust platform for integrative spatial multi‐omics analysis to map immune responses to SARS‐CoV‐2 infection in lung tissues

2023

Journal Article

In vivo inhibition of nuclear ACE2 translocation protects against SARS-CoV-2 replication and lung damage through epigenetic imprinting

Tu, Wen Juan, Melino, Michelle, Dunn, Jenny, McCuaig, Robert D., Bielefeldt-Ohmann, Helle, Tsimbalyuk, Sofiya, Forwood, Jade K., Ahuja, Taniya, Vandermeide, John, Tan, Xiao, Tran, Minh, Nguyen, Quan, Zhang, Liang, Nam, Andy, Pan, Liuliu, Liang, Yan, Smith, Corey, Lineburg, Katie, Nguyen, Tam H., Sng, Julian D. J., Tong, Zhen Wei Marcus, Chew, Keng Yih, Short, Kirsty R., Le Grand, Roger, Seddiki, Nabila and Rao, Sudha (2023). In vivo inhibition of nuclear ACE2 translocation protects against SARS-CoV-2 replication and lung damage through epigenetic imprinting. Nature Communications, 14 (1) 3680, 3680. doi: 10.1038/s41467-023-39341-4

In vivo inhibition of nuclear ACE2 translocation protects against SARS-CoV-2 replication and lung damage through epigenetic imprinting

2023

Journal Article

SARS-CoV-2 infection and viral fusogens cause neuronal and glial fusion that compromises neuronal activity

Martínez-Mármol, Ramón, Giordano-Santini, Rosina, Kaulich, Eva, Cho, Ann-Na, Przybyla, Magdalena, Riyadh, Md Asrafuzzaman, Robinson, Emilija, Chew, Keng Yih, Amor, Rumelo, Meunier, Frédéric A., Balistreri, Giuseppe, Short, Kirsty R., Ke, Yazi D., Ittner, Lars M. and Hilliard, Massimo A. (2023). SARS-CoV-2 infection and viral fusogens cause neuronal and glial fusion that compromises neuronal activity. Science Advances, 9 (23) eadg2248, 1-15. doi: 10.1126/sciadv.adg2248

SARS-CoV-2 infection and viral fusogens cause neuronal and glial fusion that compromises neuronal activity