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2021

Journal Article

Risk-benefit analysis of the AstraZeneca COVID-19 vaccine in Australia using a Bayesian network modelling framework

Lau, Colleen L, Mayfield, Helen J, Sinclair, Jane E, Brown, Samuel J, Waller, Michael, Enjeti, Anoop K, Baird, Andrew, Short, Kirsty, Mengersen, Kerrie and Litt, John (2021). Risk-benefit analysis of the AstraZeneca COVID-19 vaccine in Australia using a Bayesian network modelling framework. Vaccine, 39 (51), 7429-7440. doi: 10.1016/j.vaccine.2021.10.079

Risk-benefit analysis of the AstraZeneca COVID-19 vaccine in Australia using a Bayesian network modelling framework

2021

Other Outputs

IFI27 transcription is an early predictor for COVID-19 outcomes; a multi-cohort observational study

Shojaei, Maryam, Shamshirian, Amir, Monkman, James, Grice, Laura, Tran, Minh, Tan, Chin Wee, Rossi, Gustavo Rodrigues, McCulloch, Timothy R., Nalos, Marek, Chew, Keng Yih, Zhu, Yanshan, Xia, Yao, Wells, Timothy J., Senegaglia, Alexandra Cristina, Rebelatto, Carmen Lúcia Kuniyoshi, Franck, Claudio Luciano, dos Santos, Anna Flavia Ribeiro, de Noronha, Lucia, Motamen, Sepideh, Valadan, Reza, Amjadi, Omolbanin, Gogna, Rajan, Madan, Esha, Alizadeh-Navaei, Reza, Lamperti, Liliana, Zuñiga, Felipe, Nova-Lamperti, Estefania, Labarca, Gonzalo, Knippenberg, Ben ... Tang, Benjamin (2021). IFI27 transcription is an early predictor for COVID-19 outcomes; a multi-cohort observational study. doi: 10.1101/2021.10.29.21265555

IFI27 transcription is an early predictor for COVID-19 outcomes; a multi-cohort observational study

2021

Other Outputs

Designing an evidence-based Bayesian network for estimating the risk versus benefits of AstraZeneca COVID-19 vaccine

Mayfield, Helen J., Lau, Colleen L., Sinclair, Jane E., Brown, Samuel J., Baird, Andrew, Litt, John, Vuorinen, Aapeli, Short, Kirsty R., Waller, Michael and Mengersen, Kerrie (2021). Designing an evidence-based Bayesian network for estimating the risk versus benefits of AstraZeneca COVID-19 vaccine. doi: 10.1101/2021.10.28.21265588

Designing an evidence-based Bayesian network for estimating the risk versus benefits of AstraZeneca COVID-19 vaccine

2021

Journal Article

Dysregulated inflammation during obesity: driving disease severity in influenza virus and SARS-CoV-2 infections

Hulme, Katina D., Noye, Ellesandra C., Short, Kirsty R. and Labzin, Larisa I. (2021). Dysregulated inflammation during obesity: driving disease severity in influenza virus and SARS-CoV-2 infections. Frontiers in Immunology, 12 770066, 770066. doi: 10.3389/fimmu.2021.770066

Dysregulated inflammation during obesity: driving disease severity in influenza virus and SARS-CoV-2 infections

2021

Journal Article

Endothelial cells are not productively infected by SARS‐CoV‐2

Schimmel, Lilian, Chew, Keng Yih, Stocks, Claudia J., Yordanov, Teodor E., Essebier, Patricia, Kulasinghe, Arutha, Monkman, James, Santos Miggiolaro, Anna Flavia Ribeiro, Cooper, Caroline, Noronha, Lucia, Schroder, Kate, Lagendijk, Anne Karine, Labzin, Larisa I., Short, Kirsty R. and Gordon, Emma J. (2021). Endothelial cells are not productively infected by SARS‐CoV‐2. Clinical and Translational Immunology, 10 (10) e1350, e1350. doi: 10.1002/cti2.1350

Endothelial cells are not productively infected by SARS‐CoV‐2

2021

Journal Article

Flower lose, a cell fitness marker, predicts COVID‐19 prognosis

Yekelchyk, Michail, Madan, Esha, Wilhelm, Jochen, Short, Kirsty R, Palma, António M, Liao, Linbu, Camacho, Denise, Nkadori, Everlyne, Winters, Michael T, Rice, Emily S, Rolim, Inês, Cruz‐Duarte, Raquel, Pelham, Christopher J, Nagane, Masaki, Gupta, Kartik, Chaudhary, Sahil, Braun, Thomas, Pillappa, Raghavendra, Parker, Mark S, Menter, Thomas, Matter, Matthias, Haslbauer, Jasmin Dionne, Tolnay, Markus, Galior, Kornelia D, Matkwoskyj, Kristina A, McGregor, Stephanie M, Muller, Laura K, Rakha, Emad A, Lopez‐Beltran, Antonio ... Gogna, Rajan (2021). Flower lose, a cell fitness marker, predicts COVID‐19 prognosis. EMBO Molecular Medicine, 13 (11) e13714, e13714. doi: 10.15252/emmm.202013714

Flower lose, a cell fitness marker, predicts COVID‐19 prognosis

2021

Other Outputs

Low antigen abundance limits efficient T-cell recognition of highly conserved regions of SARS-CoV-2

Swaminathan, Srividhya, Lineburg, Katie E., Ambalathingal, George R., Crooks, Pauline, Grant, Emma J., Mohan, Sonali V, Raju, Jyothy, Panikkar, Archana, Le Texier, Laetitia, Tong, Zheng Wei Marcus, Chew, Keng Yih, Neller, Michelle A., Short, Kirsty R., Gowda, Harsha, Gras, Stephanie, Khanna, Rajiv and Smith, Corey (2021). Low antigen abundance limits efficient T-cell recognition of highly conserved regions of SARS-CoV-2. doi: 10.1101/2021.10.13.464181

Low antigen abundance limits efficient T-cell recognition of highly conserved regions of SARS-CoV-2

2021

Journal Article

Low-dose IL-2 therapy invigorates CD8+ T cells for viral control in systemic lupus erythematosus with a potential risk of deteriorating immunopathology

Zhou, Pengcheng, Chen, Jiali, He, Jing, Zheng, Ting, Yunis, Joseph, Makota, Victor, Alexandre, Yannick O., Gong, Fang, Zhang, Xia, Xie, Wuxiang, Li, Yuhui, Shao, Miao, Zhu, Yanshan, Sinclair, Jane E., Miao, Miao, Chen, Yaping, Short, Kirsty R., Mueller, Scott N., Sun, Xiaolin, Yu, Di and Li, Zhanguo (2021). Low-dose IL-2 therapy invigorates CD8+ T cells for viral control in systemic lupus erythematosus with a potential risk of deteriorating immunopathology. PLoS Pathogens, 17 (10) e1009858, e1009858. doi: 10.1371/journal.ppat.1009858

Low-dose IL-2 therapy invigorates CD8+ T cells for viral control in systemic lupus erythematosus with a potential risk of deteriorating immunopathology

2021

Other Outputs

Risk-benefit analysis of the AstraZeneca COVID-19 vaccine in Australia using a Bayesian network modelling framework

Lau, Colleen L, Mayfield, Helen J, Sinclair, Jane E, Brown, Samuel J, Waller, Michael, Enjeti, Anoop K, Baird, Andrew, Short, Kirsty, Mengersen, Kerrie and Litt, John (2021). Risk-benefit analysis of the AstraZeneca COVID-19 vaccine in Australia using a Bayesian network modelling framework. doi: 10.1101/2021.09.30.21264337

Risk-benefit analysis of the AstraZeneca COVID-19 vaccine in Australia using a Bayesian network modelling framework

2021

Journal Article

Modulation of vagal sensory neurons via high mobility group box-1 and receptor for advanced glycation end products: implications for respiratory viral infections

Mazzone, Stuart B., Yang, Seung-Kwon, Keller, Jennifer A., Simanauskaite, Juste, Arikkatt, Jaisy, Fogarty, Matthew J., Moe, Aung Aung Kywe, Chen, Chen, Trewella, Matthew W., Tian, Luyi, Ritchie, Matthew E., Chua, Brendan Y., Phipps, Simon, Short, Kirsty R. and McGovern, Alice E. (2021). Modulation of vagal sensory neurons via high mobility group box-1 and receptor for advanced glycation end products: implications for respiratory viral infections. Frontiers in Physiology, 12 744812, 744812. doi: 10.3389/fphys.2021.744812

Modulation of vagal sensory neurons via high mobility group box-1 and receptor for advanced glycation end products: implications for respiratory viral infections

2021

Journal Article

Type I diabetes mellitus increases the cardiovascular complications of influenza virus infection

Sinclair, Jane E., Bloxham, Conor J., Chiu, Han, Chew, Keng Yih, Russell, Jake, Yoshikawa, Yusuke, Bielefeldt-Ohmann, Helle, Steele, Lauren E., Hulme, Katina D., Verzele, Nathalie A. J., Noye, Ellesandra C., Wu, Melanie, Reichelt, Melissa E., Thomas, Walter G., Gallo, Linda A., Redd, Meredith A. and Short, Kirsty R. (2021). Type I diabetes mellitus increases the cardiovascular complications of influenza virus infection. Frontiers in Cellular and Infection Microbiology, 11 714440, 714440. doi: 10.3389/fcimb.2021.714440

Type I diabetes mellitus increases the cardiovascular complications of influenza virus infection

2021

Journal Article

Cardiovascular disease in SARS‐CoV‐2 infection

Sato, Kei, Sinclair, Jane E., Sadeghirad, Habib, Fraser, John F., Short, Kirsty R. and Kulasinghe, Arutha (2021). Cardiovascular disease in SARS‐CoV‐2 infection. Clinical and Translational Immunology, 10 (9) e1343, e1343. doi: 10.1002/cti2.1343

Cardiovascular disease in SARS‐CoV‐2 infection

2021

Journal Article

Postnatal inflammation in ApoE−/− mice is associated with immune training and atherosclerosis

Noye, Ellesandra C., Bekkering, Siroon, Limawan, Albert P., Nguyen, Maria U., Widiasmoko, Lisa K., Lu, Hui, Pepe, Salvatore, Cheung, Michael M., Menheniott, Trevelyan R., Wallace, Megan J., Moss, Timothy J., Burgner, David P. and Short, Kirsty R. (2021). Postnatal inflammation in ApoE−/− mice is associated with immune training and atherosclerosis. Clinical Science, 135 (15), 1859-1871. doi: 10.1042/cs20210496

Postnatal inflammation in ApoE−/− mice is associated with immune training and atherosclerosis

2021

Journal Article

The role of T‐cell immunity in COVID‐19 severity amongst people living with type II diabetes

Tong, Zhen Wei Marcus, Grant, Emma, Gras, Stephanie, Wu, Melanie, Smith, Corey, Barrett, Helen L., Gallo, Linda A. and Short, Kirsty R. (2021). The role of T‐cell immunity in COVID‐19 severity amongst people living with type II diabetes. The FEBS Journal, 288 (17), 5042-5054. doi: 10.1111/febs.16105

The role of T‐cell immunity in COVID‐19 severity amongst people living with type II diabetes

2021

Journal Article

Pre-Diabetes Increases Tuberculosis Disease Severity, While High Body Fat Without Impaired Glucose Tolerance Is Protective

Sinha, Roma, Ngo, Minh Dao, Bartlett, Stacey, Bielefeldt-Ohmann, Helle, Keshvari, Sahar, Hasnain, Sumaira Z., Donovan, Meg L., Kling, Jessica C., Blumenthal, Antje, Chen, Chen, Short, Kirsty R. and Ronacher, Katharina (2021). Pre-Diabetes Increases Tuberculosis Disease Severity, While High Body Fat Without Impaired Glucose Tolerance Is Protective. Frontiers in Cellular and Infection Microbiology, 11 691823, 691823. doi: 10.3389/fcimb.2021.691823

Pre-Diabetes Increases Tuberculosis Disease Severity, While High Body Fat Without Impaired Glucose Tolerance Is Protective

2021

Journal Article

Limited evidence for the role of environmental factors in the unusual peak of influenza in Brisbane during the 2018-2019 Australian summer

Lu, Jianyun, Yang, Zhicong, Karawita, Anjana C., Bunte, Myrna, Chew, Keng Yih, Pegg, Cassandra, Mackay, Ian, Whiley, David and Short, Kirsty R. (2021). Limited evidence for the role of environmental factors in the unusual peak of influenza in Brisbane during the 2018-2019 Australian summer. The Science of the Total Environment, 776 145967, 145967. doi: 10.1016/j.scitotenv.2021.145967

Limited evidence for the role of environmental factors in the unusual peak of influenza in Brisbane during the 2018-2019 Australian summer

2021

Journal Article

A meta-analysis on the role of children in SARS-CoV-2 in household transmission clusters

Zhu, Yanshan, Bloxham, Conor J., Hulme, Katina D., Sinclair, Jane E., Tong, Zhen Wei Marcus, Steele, Lauren E., Noye, Ellesandra C., Lu, Jiahai, Xia, Yao, Chew, Keng Yih, Pickering, Janessa, Gilks, Charles, Bowen, Asha C. and Short, Kirsty R. (2021). A meta-analysis on the role of children in SARS-CoV-2 in household transmission clusters. Clinical Infectious Diseases, 72 (12) ciaa1825, e1146-e1153. doi: 10.1093/cid/ciaa1825

A meta-analysis on the role of children in SARS-CoV-2 in household transmission clusters

2021

Journal Article

Primary chicken and duck endothelial cells display a differential response to infection with highly pathogenic avian influenza virus​​​​​​​

Tong, Zhen Wei Marcus, Karawita, Anjana C., Kern, Colin, Zhou, Huaijun, Sinclair, Jane E., Yan, Limin, Chew, Keng Yih, Lowther, Sue, Trinidad, Lee, Challagulla, Arjun, Schat, Karel A., Baker, Michelle L. and Short, Kirsty R. (2021). Primary chicken and duck endothelial cells display a differential response to infection with highly pathogenic avian influenza virus​​​​​​​. Genes, 12 (6) 901, 901. doi: 10.3390/genes12060901

Primary chicken and duck endothelial cells display a differential response to infection with highly pathogenic avian influenza virus​​​​​​​

2021

Journal Article

Humidity-dependent survival of an airborne influenza a virus: practical implications for controlling airborne viruses

Niazi, Sadegh, Short, Kirsty R., Groth, Robert, Cravigan, Luke, Spann, Kirsten, Ristovski, Zoran and Johnson, Graham R. (2021). Humidity-dependent survival of an airborne influenza a virus: practical implications for controlling airborne viruses. Environmental Science and Technology Letters, 8 (5), 412-418. doi: 10.1021/acs.estlett.1c00253

Humidity-dependent survival of an airborne influenza a virus: practical implications for controlling airborne viruses

2021

Journal Article

CD8+ T cells specific for an immunodominant SARS-CoV-2 nucleocapsid epitope cross-react with selective seasonal coronaviruses

Lineburg, Katie E., Grant, Emma J., Swaminathan, Srividhya, Chatzileontiadou, Demetra S.M., Szeto, Christopher, Sloane, Hannah, Panikkar, Archana, Raju, Jyothy, Crooks, Pauline, Rehan, Sweera, Nguyen, Andrea T., Lekieffre, Lea, Neller, Michelle A., Tong, Zhen Wei Marcus, Jayasinghe, Dhilshan, Chew, Keng Yih, Lobos, Christian A., Halim, Hanim, Burrows, Jacqueline M., Riboldi-Tunnicliffe, Alan, Chen, Weisan, D'Orsogna, Lloyd, Khanna, Rajiv, Short, Kirsty R., Smith, Corey and Gras, Stephanie (2021). CD8+ T cells specific for an immunodominant SARS-CoV-2 nucleocapsid epitope cross-react with selective seasonal coronaviruses. Immunity, 54 (5), 1055-1065. doi: 10.1016/j.immuni.2021.04.006

CD8+ T cells specific for an immunodominant SARS-CoV-2 nucleocapsid epitope cross-react with selective seasonal coronaviruses