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2021 Journal Article Role of inflammatory cytokines in COVID-19 patients: a review on molecular mechanisms, immune functions, immunopathology and immunomodulatory drugs to counter cytokine stormRabaan, Ali A., Al-Ahmed, Shamsah H., Muhammad, Javed, Khan, Amjad, Sule, Anupam A, Tirupathi, Raghavendra, Mutair, Abbas Al, Alhumaid, Saad, Al-Omari, Awad, Dhawan, Manish, Tiwari, Ruchi, Sharun, Khan, Mohapatra, Ranjan K., Mitra, Saikat, Bilal, Muhammad, Alyami, Salem A., Emran, Talha Bin, Moni, Mohammad Ali and Dhama, Kuldeep (2021). Role of inflammatory cytokines in COVID-19 patients: a review on molecular mechanisms, immune functions, immunopathology and immunomodulatory drugs to counter cytokine storm. Vaccines, 9 (5) 436, 436. doi: 10.3390/vaccines9050436 |
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2021 Journal Article Machine learning approach to predicting COVID-19 disease severity based on clinical blood test data: Statistical analysis and model developmentAktar, Sakifa, Ahamad, Md Martuza, Rashed-Al-Mahfuz, Md, Azad, A. K.M., Uddin, Shahadat, Kamal, A. H.M., Alyami, Salem A., Lin, Ping-I., Islam, Sheikh Mohammed Shariful, Quinn, Julian M.W., Eapen, Valsamma and Moni, Mohammad Ali (2021). Machine learning approach to predicting COVID-19 disease severity based on clinical blood test data: Statistical analysis and model development. JMIR Medical Informatics, 9 (4) e25884, e25884. doi: 10.2196/25884 |
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2021 Journal Article A comparative analysis of active learning for biomedical text miningNaseem, Usman, Khushi, Matloob, Khan, Shah Khalid, Shaukat, Kamran and Moni, Mohammad Ali (2021). A comparative analysis of active learning for biomedical text mining. Applied System Innovation, 4 (1) 23, 23. doi: 10.3390/asi4010023 |
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2021 Journal Article Hearing loss prevalence and years lived with disability, 1990-2019: findings from the Global Burden of Disease Study 2019Haile, Lydia M., Kamenov, Kaloyan, Briant, Paul Svitil, Orji, Aislyn U., Steinmetz, Jaimie D., Abdoli, Amir, Abdollahi, Mohammad, Abu-Gharbieh, Eman, Afshin, Ashkan, Ahmed, Haroon, Rashid, Tarik Ahmed, Akalu, Yonas, Alahdab, Fares, Alanezi, Fahad Mashhour, Alanzi, Turki M., Al Hamad, Hanadi, Ali, Liaqat, Alipour, Vahid, Al-Raddadi, Rajaa M., Amu, Hubert, Arabloo, Jalal, Arab-Zozani, Morteza, Arulappan, Judie, Ashbaugh, Charlie, Atnafu, Desta Debalkie, Babar, Zaheer-Ud-Din, Baig, Atif Amin, Banik, Palash Chandra, Bärnighausen, Till Winfried ... Chadha, Shelly (2021). Hearing loss prevalence and years lived with disability, 1990-2019: findings from the Global Burden of Disease Study 2019. The Lancet, 397 (10278), 996-1009. doi: 10.1016/S0140-6736(21)00516-X |
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2021 Journal Article PredNTS: improved and robust prediction of nitrotyrosine sites by integrating multiple sequence featuresNilamyani, Andi Nur, Auliah, Firda Nurul, Moni, Mohammad Ali, Shoombuatong, Watshara, Hasan, Md Mehedi and Kurata, Hiroyuki (2021). PredNTS: improved and robust prediction of nitrotyrosine sites by integrating multiple sequence features. International Journal of Molecular Sciences, 22 (5) 2704, 1-11. doi: 10.3390/ijms22052704 |
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2021 Journal Article Use of electronic health data for disease prediction: a comprehensive literature reviewHossain, Md. Ekramul, Khan, Arif, Moni, Mohammad Ali and Uddin, Shahadat (2021). Use of electronic health data for disease prediction: a comprehensive literature review. IEEE/ACM Transactions on Computational Biology and Bioinformatics, 18 (2) 8815739, 745-758. doi: 10.1109/tcbb.2019.2937862 |
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2021 Journal Article Pharmacoinformatics based elucidation and designing of potential inhibitors against Plasmodium falciparum to target importin α/β mediated nuclear importationOany, Arafat Rahman, Pervin, Tahmina and Moni, Mohammad Ali (2021). Pharmacoinformatics based elucidation and designing of potential inhibitors against Plasmodium falciparum to target importin α/β mediated nuclear importation. Infection, Genetics and Evolution, 88 104699, 104699. doi: 10.1016/j.meegid.2020.104699 |
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2021 Journal Article Network-based identification genetic effect of SARS-CoV-2 infections to Idiopathic pulmonary fibrosis (IPF) patientsTaz, Tasnimul Alam, Ahmed, Kawsar, Paul, Bikash Kumar, Kawsar, Md, Aktar, Nargis, Mahmud, S. M. Hasan and Moni, Mohammad Ali (2021). Network-based identification genetic effect of SARS-CoV-2 infections to Idiopathic pulmonary fibrosis (IPF) patients. Briefings in Bioinformatics, 22 (2), 1254-1266. doi: 10.1093/bib/bbaa235 |
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2021 Journal Article Diseasome and comorbidities complexities of SARS-CoV-2 infection with common malignant diseasesSatu, Shahriare, Khan, Imran, Rahman, Rezanur, Howlader, Koushik Chandra, Roy, Shatabdi, Roy, Shuvo Saha, Quinn, Julian M. W and Moni, Mohammad Ali (2021). Diseasome and comorbidities complexities of SARS-CoV-2 infection with common malignant diseases. Briefings in Bioinformatics, 22 (2), 1415-1429. doi: 10.1093/bib/bbab003 |
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2021 Journal Article Bioinformatics and system biology approach to identify the influences of COVID-19 on cardiovascular and hypertensive comorbiditiesNashiry, Asif, Sarmin Sumi, Shauli, Islam, Salequl, Quinn, Julian M. W and Moni, Mohammad Ali (2021). Bioinformatics and system biology approach to identify the influences of COVID-19 on cardiovascular and hypertensive comorbidities. Briefings in Bioinformatics, 22 (2), 1387-1401. doi: 10.1093/bib/bbaa426 |
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2021 Journal Article Identification of biomarkers and pathways for the SARS-CoV-2 infections that make complexities in pulmonary arterial hypertension patientsTaz, Tasnimul Alam, Ahmed, Kawsar, Paul, Bikash Kumar, Al-Zahrani, Fahad Ahmed, Mahmud, S M Hasan and Moni, Mohammad Ali (2021). Identification of biomarkers and pathways for the SARS-CoV-2 infections that make complexities in pulmonary arterial hypertension patients. Briefings in Bioinformatics, 22 (2), 1451-1465. doi: 10.1093/bib/bbab026 |
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2021 Journal Article Deep convolutional neural networks based ECG beats classification to diagnose cardiovascular conditionsRashed-Al-Mahfuz, Md., Moni, Mohammad Ali, Lio’, Pietro, Islam, Sheikh Mohammed Shariful, Berkovsky, Shlomo, Khushi, Matloob and Quinn, Julian M. W. (2021). Deep convolutional neural networks based ECG beats classification to diagnose cardiovascular conditions. Biomedical Engineering Letters, 11 (2), 147-162. doi: 10.1007/s13534-021-00185-w |
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2021 Journal Article Causes of blindness and vision impairment in 2020 and trends over 30 years, and prevalence of avoidable blindness in relation to VISION 2020: The Right to Sight: an analysis for the Global Burden of Disease StudyBourne, Rupert R.A., Steinmetz, Jaimie D., Saylan, Mete, Mersha, Abera M., Weldemariam, Abrha Hailay, Wondmeneh, Temesgen Gebeyehu, Sreeramareddy, Chandrashekhar T., Pinheiro, Marina, Yaseri, Mehdi, Yu, Chuanhua, Zastrozhin, Mikhail Sergeevich, Zastrozhina, Anasthasia, Zhang, Zhi-Jiang, Zimsen, Stephanie R.M., Yonemoto, Naohiro, Tsegaye, Gebiyaw Wudie, Vu, Giang Thu, Vongpradith, Avina, Renzaho, Andre M.N., Sorrie, Muluken Bekele, Shaheen, Amira A., Shiferaw, Wondimeneh Shibabaw, Skryabin, Valentin Yurievich, Skryabina, Anna Aleksandrovna, Saya, Ganesh Kumar, Rahimi-Movaghar, Vafa, Shigematsu, Mika, Sahraian, Mohammad Ali, Naderifar, Homa ... GBD 2019 Blindness and Vision Impairment Collaborators on behalf of the Vision Loss Expert Group of the Global Burden of Disease Study (2021). Causes of blindness and vision impairment in 2020 and trends over 30 years, and prevalence of avoidable blindness in relation to VISION 2020: The Right to Sight: an analysis for the Global Burden of Disease Study. The Lancet Global Health, 9 (2), e144-e160. doi: 10.1016/S2214-109X(20)30489-7 |
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2021 Journal Article Onslaught of COVID-19: How did governments react and at what point of the crisis?Uddin, Shahadat, Imam, Tasadduq, Moni, Mohammad Ali and Thow, Anne-Marie (2021). Onslaught of COVID-19: How did governments react and at what point of the crisis?. Population Health Management, 24 (1), 13-19. doi: 10.1089/pop.2020.0138 |
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2021 Journal Article Identification of common pathogenetic processes between schizophrenia and diabetes mellitus by systems biology analysisRahman, Md Rezanur, Islam, Tania, Nicoletti, Ferdinando, Petralia, Maria Cristina, Ciurleo, Rosella, Fisicaro, Francesco, Pennisi, Manuela, Bramanti, Alessia, Demirtas, Talip Yasir, Gov, Esra, Islam, Md Rafiqul, Mussa, Bashair M., Moni, Mohammad Ali and Fagone, Paolo (2021). Identification of common pathogenetic processes between schizophrenia and diabetes mellitus by systems biology analysis. Genes, 12 (2) 237, 1-14. doi: 10.3390/genes12020237 |
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2021 Journal Article Whole proteome screening and identification of potential epitopes of SARS-CoV-2 for vaccine design-an immunoinformatic, molecular docking and molecular dynamics simulation accelerated robust strategyEzaj, Md. Muzahid Ahmed, Junaid, Md., Akter, Yeasmin, Nahrin, Afsana, Siddika, Aysha, Afrose, Syeda Samira, Nayeem, S. M. Abdul, Haque, Md. Sajedul, Moni, Mohammad Ali and Hosen, S. M. Zahid (2021). Whole proteome screening and identification of potential epitopes of SARS-CoV-2 for vaccine design-an immunoinformatic, molecular docking and molecular dynamics simulation accelerated robust strategy. Journal of Biomolecular Structure and Dynamics, 40 (14), 1-26. doi: 10.1080/07391102.2021.1886171 |
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2021 Journal Article Identifying the function of methylated genes in Alzheimer’s disease to determine epigenetic signatures: a comprehensive bioinformatics analysisRahman, Md Rezanur, Islam, Tania, Gov, Esra, Quinn, Julian M.W. and Moni, Mohammad Ali (2021). Identifying the function of methylated genes in Alzheimer’s disease to determine epigenetic signatures: a comprehensive bioinformatics analysis. Experimental Results, 2 e9, 1-13. doi: 10.1017/exp.2020.65 |
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2021 Journal Article Computational formulation and immune dynamics of a multi-peptide vaccine candidate against Crimean-Congo hemorrhagic fever virusKhan, Md. Shakil Ahmed, Nain, Zulkar, Syed, Shifath Bin, Abdulla, Faruq, Moni, Mohammad Ali, Sheam, Md. Moinuddin, Karim, Mohammad Minnatul and Adhikari, Utpal Kumar (2021). Computational formulation and immune dynamics of a multi-peptide vaccine candidate against Crimean-Congo hemorrhagic fever virus. Molecular and Cellular Probes, 55 101693, 101693. doi: 10.1016/j.mcp.2020.101693 |
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2021 Journal Article A deep convolutional neural network method to detect seizures and characteristic frequencies using Epileptic Electroencephalogram (EEG) dataRashed-Al-Mahfuz, Md., Moni, Mohammad Ali, Uddin, Shahadat, Alyami, Salem A., Summers, Matthew A. and Eapen, Valsamma (2021). A deep convolutional neural network method to detect seizures and characteristic frequencies using Epileptic Electroencephalogram (EEG) data. IEEE Journal of Translational Engineering in Health and Medicine, 9 9319690, 1-12. doi: 10.1109/jtehm.2021.3050925 |
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2021 Journal Article Clinically applicable machine learning approaches to identify attributes of Chronic Kidney Disease (CKD) for use in low-cost diagnostic screeningRashed-Al-Mahfuz, Md., Haque, Abedul, Azad, Akm, Alyami, Salem A., Quinn, Julian M. W. and Moni, Mohammad Ali (2021). Clinically applicable machine learning approaches to identify attributes of Chronic Kidney Disease (CKD) for use in low-cost diagnostic screening. IEEE Journal of Translational Engineering in Health and Medicine, 9 4900511, 1-11. doi: 10.1109/jtehm.2021.3073629 |
