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2021 Journal Article A computational approach to design potential siRNA molecules as a prospective tool for silencing nucleocapsid phosphoprotein and surface glycoprotein gene of SARS-CoV-2Chowdhury, Umar Faruq, Sharif Shohan, Mohammad Umer, Hoque, Kazi Injamamul, Beg, Mirza Ashikul, Sharif Siam, Mohammad Kawsar and Moni, Mohammad Ali (2021). A computational approach to design potential siRNA molecules as a prospective tool for silencing nucleocapsid phosphoprotein and surface glycoprotein gene of SARS-CoV-2. Genomics, 113 (1 Part 1), 331-343. doi: 10.1016/j.ygeno.2020.12.021 |
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2021 Journal Article Ensemble of Convolutional Neural Networks to diagnose Acute Lymphoblastic Leukemia from microscopic imagesMondal, Chayan, Hasan, Md. Kamrul, Ahmad, Mohiuddin, Awal, Md. Abdul, Jawad, Md. Tasnim, Dutta, Aishwariya, Islam, Md. Rabiul and Moni, Mohammad Ali (2021). Ensemble of Convolutional Neural Networks to diagnose Acute Lymphoblastic Leukemia from microscopic images. Informatics in Medicine Unlocked, 27 100794, 100794. doi: 10.1016/j.imu.2021.100794 |
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2020 Journal Article Gene expression profiling of SARS-CoV-2 infections reveal distinct primary lung cell and systemic immune infection responses that identify pathways relevant in COVID-19 diseaseMoni, Mohammad Ali, Quinn, Julian M. W., Sinmaz, Nese and Summers, Matthew A. (2020). Gene expression profiling of SARS-CoV-2 infections reveal distinct primary lung cell and systemic immune infection responses that identify pathways relevant in COVID-19 disease. Briefings in Bioinformatics, 22 (2), 1324-1337. doi: 10.1093/bib/bbaa376 |
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2020 Journal Article A system biological approach to investigate the genetic profiling and comorbidities of type 2 diabetesPodder, Nitun Kumar, Rana, Humayan Kabir, Azam, Md. Shafiul, Rana, Md. Shohel, Akhtar, Mst. Rashida, Rahman, Md Rezanur, Rahman, Md Habibur and Moni, Mohammad Ali (2020). A system biological approach to investigate the genetic profiling and comorbidities of type 2 diabetes. Gene Reports, 21 100830, 1-13. doi: 10.1016/j.genrep.2020.100830 |
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2020 Journal Article Design of novel viral attachment inhibitors of the spike glycoprotein (S) of severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) through virtual screening and dynamicsOany, Arafat Rahman, Mia, Mamun, Pervin, Tahmina, Junaid, Md., Hosen, S. M. Zahid and Moni, Mohammad Ali (2020). Design of novel viral attachment inhibitors of the spike glycoprotein (S) of severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) through virtual screening and dynamics. International Journal of Antimicrobial Agents, 56 (6) 106177, 106177. doi: 10.1016/j.ijantimicag.2020.106177 |
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2020 Journal Article A machine learning model to identify early stage symptoms of SARS-Cov-2 infected patientsAhamad, Md. Martuza, Aktar, Sakifa, Rashed-Al-Mahfuz, Md., Uddin, Shahadat, Liò, Pietro, Xu, Haoming, Summers, Matthew A., Quinn, Julian M.W. and Moni, Mohammad Ali (2020). A machine learning model to identify early stage symptoms of SARS-Cov-2 infected patients. Expert Systems with Applications, 160 113661, 113661. doi: 10.1016/j.eswa.2020.113661 |
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2020 Journal Article Machine learning and bioinformatics models to identify pathways that mediate influences of welding fumes on cancer progressionRana, Humayan Kabir, Akhtar, Mst. Rashida, Islam, M. Babul, Ahmed, Mohammad Boshir, Lió, Pietro, Huq, Fazlul, Quinn, Julian M. W. and Moni, Mohammad Ali (2020). Machine learning and bioinformatics models to identify pathways that mediate influences of welding fumes on cancer progression. Scientific Reports, 10 (1) 2795, 2795. doi: 10.1038/s41598-020-57916-9 |
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2020 Journal Article Zeolite synthesis from low-cost materials and environmental applications: a reviewKhaleque, Abdul, Alam, Md Masruck, Hoque, Mozammel, Mondal, Shuvodip, Haider, Jahid Bin, Xu, Bentuo, Johir, M. A.H., Karmakar, Aneek Krishna, Zhou, J. L., Ahmed, Mohammad Boshir and Moni, Mohammad Ali (2020). Zeolite synthesis from low-cost materials and environmental applications: a review. Environmental Advances, 2 100019. doi: 10.1016/j.envadv.2020.100019 |
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2020 Journal Article Analysis of topological properties and drug discovery for bipolar disorder and associated diseases: a bioinformatics approachShadhin, Khairul Alam, Hasan, Md. Rakibul, Paul, Bikash Kumar, Ahmed, Kawsar, Moni, Mohammad Ali, Kahrizi, Danial, Bhuyian, Touhid and Ibrahim, Sobhy M. (2020). Analysis of topological properties and drug discovery for bipolar disorder and associated diseases: a bioinformatics approach. Cellular and Molecular Biology, 66 (7), 152-160. doi: 10.14715/cmb/2020.66.7.23 |
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2020 Journal Article Five insights from the Global Burden of Disease Study 2019Abbafati, Cristiana, Abbas, Kaja M., Abbasi, Mohammad, Abbasifard, Mitra, Abbasi-Kangevari, Mohsen, Abbastabar, Hedayat, Abd-Allah, Foad, Abdelalim, Ahmed, Abdollahi, Mohammad, Abdollahpour, Ibrahim, Abedi, Aidin, Abedi, Parisa, Abegaz, Kedir Hussein, Abolhassani, Hassan, Abosetugn, Akine Eshete, Aboyans, Victor, Abrams, Elissa M., Abreu, Lucas Guimaraes, Abrigo, Michael R. M., Abu Haimed, Abdulaziz Khalid, Abualhasan, Ahmed, Abu-Gharbieh, Eman, Abu-Raddad, Laith Jamal, Abushouk, Abdelrahman I., Acebedo, Alyssa, Ackerman, Ilana N., Adabi, Maryam, Adair, Tim, Adamu, Abdu A. ... Murray, Christopher J. L. (2020). Five insights from the Global Burden of Disease Study 2019. Lancet, 396 (10258), 1135-1159. |
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2020 Journal Article Detection of molecular signatures and pathways shared in inflammatory bowel disease and colorectal cancer: A bioinformatics and systems biology approachAl-Mustanjid, Md., Mahmud, S.M. Hasan, Royel, Md. Rejaul Islam, Rahman, Md. Habibur, Islam, Tania, Rahman, Md. Rezanur and Moni, Mohammad Ali (2020). Detection of molecular signatures and pathways shared in inflammatory bowel disease and colorectal cancer: A bioinformatics and systems biology approach. Genomics, 112 (5), 3416-3426. doi: 10.1016/j.ygeno.2020.06.001 |
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2020 Journal Article Pathogenetic profiling of COVID-19 and SARS-like virusesNain, Zulkar, Rana, Humayan Kabir, Liò, Pietro, Islam, Sheikh Mohammed Shariful, Summers, Matthew A and Moni, Mohammad Ali (2020). Pathogenetic profiling of COVID-19 and SARS-like viruses. Briefings in Bioinformatics, 22 (2), 1175-1196. doi: 10.1093/bib/bbaa173 |
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2020 Journal Article Mapping geographical inequalities in childhood diarrhoeal morbidity and mortality in low-income and middle-income countries, 2000-17: analysis for the Global Burden of Disease Study 2017Reiner, Robert C., Wiens, Kirsten E., Deshpande, Aniruddha, Baumann, Mathew M., Lindstedt, Paulina A., Blacker, Brigette F., Troeger, Christopher E., Earl, Lucas, Munro, Sandra B., Abate, Degu, Abbastabar, Hedayat, Abd-Allah, Foad, Abdelalim, Ahmed, Abdollahpour, Ibrahim, Abdulkader, Rizwan Suliankatchi, Abebe, Getaneh, Abegaz, Kedir Hussein, Abreu, Lucas Guimaraes, Abrigo, Michael R. M., Accrombessi, Manfred Mario Kokou, Acharya, Dilaram, Adabi, Maryam, Adebayo, Oladimeji M., Adedoyin, Rufus Adesoji, Adekanmbi, Victor, Adetokunboh, Olatunji O., Adham, Davoud, Adhena, Beyene Meressa, Afarideh, Mohsen ... Hay, Simon I. (2020). Mapping geographical inequalities in childhood diarrhoeal morbidity and mortality in low-income and middle-income countries, 2000-17: analysis for the Global Burden of Disease Study 2017. Lancet, 395 (10239), 1779-1801. doi: 10.1016/S0140-6736(20)30114-8 |
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2020 Journal Article A systematic review of network studies based on administrative health dataKarim, Shakir, Uddin, Shahadat, Imam, Tasadduq and Moni, Mohammad Ali (2020). A systematic review of network studies based on administrative health data. International Journal of Environmental Research and Public Health, 17 (7) 2568, 2568. doi: 10.3390/ijerph17072568 |
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2020 Journal Article Advanced treatment technologies efficacies and mechanism of per- and poly-fluoroalkyl substances removal from waterAhmed, Mohammad Boshir, Alam, Md. Masruck, Zhou, John L., Xu, Bentuo, Johir, Md Abu Hasan, Karmakar, Aneek Krishna, Rahman, Md. Saifur, Hossen, Jewel, Hasan, A.T.M. Kamrul and Moni, Mohammad Ali (2020). Advanced treatment technologies efficacies and mechanism of per- and poly-fluoroalkyl substances removal from water. Process Safety and Environmental Protection, 136, 1-14. doi: 10.1016/j.psep.2020.01.005 |
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2020 Journal Article Network-based computational approach to identify genetic links between cardiomyopathy and its risk factorsHaidar, M. Nasim, Islam, M. Babul, Chowdhury, Utpala Nanda, Rahman, M. Rezanur, Huq, Fazlul, Quinn, Julian M.W. and Moni, Mohammad Ali (2020). Network-based computational approach to identify genetic links between cardiomyopathy and its risk factors. IET Systems Biology, 14 (2), 75-84. doi: 10.1049/iet-syb.2019.0074 |
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2020 Journal Article Computational prediction of protein ubiquitination sites mapping on Arabidopsis thalianaMosharaf, Md. Parvez, Hassan, Md. Mehedi, Ahmed, Fee Faysal, Khatun, Mst. Shamima, Moni, Mohammad Ali and Mollah, Md. Nurul Haque (2020). Computational prediction of protein ubiquitination sites mapping on Arabidopsis thaliana. Computational Biology and Chemistry, 85 107238, 107238. doi: 10.1016/j.compbiolchem.2020.107238 |
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2020 Journal Article Identification of molecular signatures and pathways to identify novel therapeutic targets in Alzheimer's disease: Insights from a systems biomedicine perspectiveRahman, Md. Rezanur, Islam, Tania, Zaman, Toyfiquz, Shahjaman, Md., Karim, Md. Rezaul, Huq, Fazlul, Quinn, Julian M.W., Holsinger, R.M. Damian, Gov, Esra and Moni, Mohammad Ali (2020). Identification of molecular signatures and pathways to identify novel therapeutic targets in Alzheimer's disease: Insights from a systems biomedicine perspective. Genomics, 112 (2), 1290-1299. doi: 10.1016/j.ygeno.2019.07.018 |
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2020 Journal Article Network-based genetic profiling reveals cellular pathway differences between follicular thyroid carcinoma and follicular thyroid adenomaHossain, Md. Ali, Asa, Tania Akter, Rahman, Md. Mijanur, Uddin, Shahadat, Moustafa, Ahmed A., Quinn, Julian M. W. and Moni, Mohammad Ali (2020). Network-based genetic profiling reveals cellular pathway differences between follicular thyroid carcinoma and follicular thyroid adenoma. International Journal of Environmental Research and Public Health, 17 (4) 1373, 1373. doi: 10.3390/ijerph17041373 |
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2020 Journal Article A network-based bioinformatics approach to identify molecular biomarkers for type 2 diabetes that are linked to the progression of neurological diseasesRahman, Md Habibur, Peng, Silong, Hu, Xiyuan, Chen, Chen, Rahman, Md Rezanur, Uddin, Shahadat, Quinn, Julian M. W. and Moni, Mohammad Ali (2020). A network-based bioinformatics approach to identify molecular biomarkers for type 2 diabetes that are linked to the progression of neurological diseases. International Journal of Environmental Research and Public Health, 17 (3) 1035, 1-25. doi: 10.3390/ijerph17031035 |
