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2024

Journal Article

Prostaglandins in the inflamed central nervous system: potential therapeutic targets

Sheremeta, Chynna-Loren, Yarlagadda, Sai, Smythe, Mark L. and Noakes, Peter G. (2024). Prostaglandins in the inflamed central nervous system: potential therapeutic targets. Current Drug Targets, 25 (13), 885-908. doi: 10.2174/0113894501323980240815113851

Prostaglandins in the inflamed central nervous system: potential therapeutic targets

2024

Journal Article

Acid-sensing ion channel 1a blockade reduces myocardial injury in rodent models of myocardial infarction

Redd, Meredith A, Yoshikawa, Yusuke, Khan, Nemat, Waqar, Maleeha, Saez, Natalie J, Outhwaite, Jennifer E, Russell, Jake S, Hanna, Amy D, Chiu, Han S, Er, Sing Yan, Butcher, Neville J, Mardon, Karine, Fraser, John F, Smythe, Mark L, Rash, Lachlan D, Thomas, Walter G, King, Glenn F, Reichelt, Melissa E and Palpant, Nathan J (2024). Acid-sensing ion channel 1a blockade reduces myocardial injury in rodent models of myocardial infarction. European Heart Journal, 45 (17), 1571-1574. doi: 10.1093/eurheartj/ehad793

Acid-sensing ion channel 1a blockade reduces myocardial injury in rodent models of myocardial infarction

2021

Journal Article

Hematopoietic prostaglandin D synthase inhibitor PK007 decreases muscle necrosis in DMD mdx model mice

Yarlagadda, Sai, Kulis, Christina, Noakes, Peter G. and Smythe, Mark L. (2021). Hematopoietic prostaglandin D synthase inhibitor PK007 decreases muscle necrosis in DMD mdx model mice. Life, 11 (9) 994, 994. doi: 10.3390/life11090994

Hematopoietic prostaglandin D synthase inhibitor PK007 decreases muscle necrosis in DMD mdx model mice

2018

Journal Article

PGD2/DP2 receptor activation promotes severe viral bronchiolitis by suppressing IFN-λ production

Werder, Rhiannon B., Lynch, Jason P., Simpson, Jennifer C., Zhang, Vivian, Hodge, Nick H., Poh, Matthew, Forbes-Blom, Elizabeth, Kulis, Christina, Smythe, Mark L., Upham, John W., Spann, Kirsten, Everard, Mark L. and Phipps, Simon (2018). PGD2/DP2 receptor activation promotes severe viral bronchiolitis by suppressing IFN-λ production. Science Translational Medicine, 10 (440) eaao0052, eaao0052. doi: 10.1126/scitranslmed.aao0052

PGD2/DP2 receptor activation promotes severe viral bronchiolitis by suppressing IFN-λ production

2017

Conference Publication

Hepcidin Mimetic Ptg-300 for Treatment of Ineffective Erythropoiesis and Iron Overload

Bourne, Gregory, Zhao, Li, Bhandari, Ashok, Frederick, Brian, McMahon, Jaimee, Tran, Vinh, Zhang, Jenny, Stephenson, Adam, Tovera, James, Bai, Lu, Annamalai, Thamil, Patel, Dinesh, Smythe, Mark and Liu, David (2017). Hepcidin Mimetic Ptg-300 for Treatment of Ineffective Erythropoiesis and Iron Overload. Seventh Congress of the International BioIron Society (IBIS)Biennial World Meeting (BioIron 2017), Los Angeles, CA, United States, 7 - 11 May 2017. Hoboken, NJ United States: Wiley.

Hepcidin Mimetic Ptg-300 for Treatment of Ineffective Erythropoiesis and Iron Overload

2016

Journal Article

Clustering of disulfide-rich peptides provides scaffolds for hit discovery by phage display: application to interleukin-23

Barkan, David T., Cheng, Xiao-Li, Celino, Herodion, Tran, Tran T., Bhandari, Ashok, Craik, Charles S., Sali, Andrej and Smythe, Mark L. (2016). Clustering of disulfide-rich peptides provides scaffolds for hit discovery by phage display: application to interleukin-23. BMC Bioinformatics, 17 (481) 481, 481. doi: 10.1186/s12859-016-1350-9

Clustering of disulfide-rich peptides provides scaffolds for hit discovery by phage display: application to interleukin-23

2015

Journal Article

Discovery and characterization of a potent interleukin-6 binding peptide with neutralizing activity in vivo

Ranganath, Sheila, Bhandari, Ashok, Avitahl-Curtis, Nicole, McMahon, Jaimee, Wachtel, Derek, Zhang, Jenny, Leitheiser, Christopher, Bernier, Sylvie G., Liu, Guang, Tran, Tran T., Celino, Herodion, Tobin, Jenny, Jung, Joon, Zhao, Hong, Glen, Katie E., Graul, Chris, Griffin, Aliesha, Schairer, Wayne C., Higgins, Carolyn, Reza, Tammi L., Mowe, Eva, Rivers, Sam, Scott, Sonya, Monreal, Alex, Shea, Courtney, Bourne, Greg, Coons, Casey, Smith, Adaline, Tang, Kim ... Carlson, Kenneth E. (2015). Discovery and characterization of a potent interleukin-6 binding peptide with neutralizing activity in vivo. PLoS One, 10 (11) e0141330, 1-19. doi: 10.1371/journal.pone.0141330

Discovery and characterization of a potent interleukin-6 binding peptide with neutralizing activity in vivo

2011

Journal Article

Conformational searching using a population-based incremental learning algorithm

Long, Stephen M., Tran, Tran T., Adams, Peter, Darwen, Paul and Smythe, M. L. (2011). Conformational searching using a population-based incremental learning algorithm. Journal of Computational Chemistry, 32 (8), 1541-1549. doi: 10.1002/jcc.21732

Conformational searching using a population-based incremental learning algorithm

2011

Journal Article

Sigma-class glutathione transferases

Flanagan, Jack U. and Smythe, Mark L. (2011). Sigma-class glutathione transferases. Drug Metabolism Reviews, 43 (2), 194-214. doi: 10.3109/03602532.2011.560157

Sigma-class glutathione transferases

2010

Journal Article

Defining scaffold geometries for interacting with proteins: Geometrical classification of secondary structure linking regions

Tran, Tran T., Kulis, Christina, Long, Steven M., Bryant, Darryn, Adams, Peter and Smythe, Mark L. (2010). Defining scaffold geometries for interacting with proteins: Geometrical classification of secondary structure linking regions. Journal of Computer-Aided Molecular Design, 24 (11), 917-934. doi: 10.1007/s10822-010-9384-y

Defining scaffold geometries for interacting with proteins: Geometrical classification of secondary structure linking regions

2010

Journal Article

Development and characterization of new inhibitors of the human and mouse hematopoietic prostaglandin D-2 synthases

Christ, Angelika N., Labzin, Larisa, Bourne, Gregory T., Fukunishi, Hirotada, Weber, Jane E., Sweet, Matthew J., Smythe, Mark L. and Flanagan, Jack U. (2010). Development and characterization of new inhibitors of the human and mouse hematopoietic prostaglandin D-2 synthases. Journal of Medicinal Chemistry, 53 (15), 5536-5548. doi: 10.1021/jm100194a

Development and characterization of new inhibitors of the human and mouse hematopoietic prostaglandin D-2 synthases

2010

Journal Article

Identification and characterisation of new inhibitors for the human hematopoietic prostaglandin D-2 synthase

Weber, Jane E., Oakley, Aaron J., Christ, Angelika N., Hayes, John D., Hall, Rhonda, Hume, David A., Board, Philip G., Smythe, Mark L. and Flanagan, Jack U. (2010). Identification and characterisation of new inhibitors for the human hematopoietic prostaglandin D-2 synthase. European Journal of Medicinal Chemistry, 45 (2), 447-454. doi: 10.1016/j.ejmech.2009.10.025

Identification and characterisation of new inhibitors for the human hematopoietic prostaglandin D-2 synthase

2010

Conference Publication

Design, synthesis and evaluation of inhibitors targeting the SHP-1 catalytic domain

Kulis, C., Bourne, G., Kellie, S. and Smythe, M. (2010). Design, synthesis and evaluation of inhibitors targeting the SHP-1 catalytic domain. EPS 2010: The 31st European Peptide Symposium, Copenhagen, Denmark, 5-9 September 2010. West Sussex, United Kingdom: John Wiley & Sons. doi: 10.1002/psc.1303

Design, synthesis and evaluation of inhibitors targeting the SHP-1 catalytic domain

2008

Journal Article

Library of biphenyl privileged substructures using a safety-catch linker approach

Severinsen, Rune, Bourne, Gregory T., Tran, Tran T., Ankersen, Michael, Begtrup, Mikael and Smythe, Mark L. (2008). Library of biphenyl privileged substructures using a safety-catch linker approach. Journal of Combinatorial Chemistry, 10 (4), 557-566. doi: 10.1021/cc800006g

Library of biphenyl privileged substructures using a safety-catch linker approach

2008

Journal Article

Cyclic tetrapeptides via the ring contraction strategy: Chemical techniques useful for their identification

Horton, D. A., Bourne, G. T., Coughlan, J., Kaiser, S. M., Jacobs, C. M., Jones, A., Ruhmann, A., Turner, J. Y. and Smythe, M. L. (2008). Cyclic tetrapeptides via the ring contraction strategy: Chemical techniques useful for their identification. Organic & Biomolecular Chemistry, 6 (8), 1386-1395. doi: 10.1039/b800464a

Cyclic tetrapeptides via the ring contraction strategy: Chemical techniques useful for their identification

2006

Journal Article

A gradient descent algorithm for minimizing amino acid coupling reactions when synthesizing cyclic-peptide libraries

Darwen, PJ, Tran, TT, Bourne, GT, Nielson, JL and Smythe, ML (2006). A gradient descent algorithm for minimizing amino acid coupling reactions when synthesizing cyclic-peptide libraries. Combinatorial Chemistry & High Throughput Screening, 9 (7), 559-563. doi: 10.2174/138620706777935333

A gradient descent algorithm for minimizing amino acid coupling reactions when synthesizing cyclic-peptide libraries

2005

Journal Article

A convenient method for synthesis of cyclic peptide libraries

Bourne, Gregory T, Nielson, Jonathon L, Coughlan, Justin F, Darwen, Paul, Campitelli, Marc R, Horton, Douglas A, Rhümann, Andreas, Love, Stephen G, Tran, Tran T and Smythe, Mark L (2005). A convenient method for synthesis of cyclic peptide libraries. Methods in molecular biology (Clifton, N.J.), 298, 151-165. doi: 10.1385/1-59259-877-3:151

A convenient method for synthesis of cyclic peptide libraries

2005

Journal Article

A safety catch linker for Fmoc-based assembly of constrained cyclic peptides

Ravn, J, Bourne, GT and Smythe, ML (2005). A safety catch linker for Fmoc-based assembly of constrained cyclic peptides. Journal of Peptide Science, 11 (9), 572-578. doi: 10.1002/psc.651

A safety catch linker for Fmoc-based assembly of constrained cyclic peptides

2005

Book Chapter

A convenient method for the synthesis of cyclic peptide libraries

Bourne, Gregory T., Nielson, Jonathon L., Coughlan, Justin F., Darwen, Paul, Campitelli, Marc R., Horton, Douglas A., Rhumann, Andreas, Love, Stephen G., Tran, Tran T. and Smythe, Mark L. (2005). A convenient method for the synthesis of cyclic peptide libraries. Peptide synthesis and applications. (pp. 151-166) edited by John Howl. Clifton, NJ, USA: Humana Press.

A convenient method for the synthesis of cyclic peptide libraries

2005

Journal Article

Intramolecular disulphide bond arrangements in nonhomologous proteins

Hartig, Gerald R. S., Tran, Tran T. and Smythe, Mark L. (2005). Intramolecular disulphide bond arrangements in nonhomologous proteins. Protein Science, 14 (2), 474-482. doi: 10.1110/ps.04923305

Intramolecular disulphide bond arrangements in nonhomologous proteins