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2022 Journal Article The duodenal mucosa associated microbiome, visceral sensory function, immune activation and psychological comorbidities in functional gastrointestinal disorders with and without self-reported non-celiac wheat sensitivityShah, Ayesha, Kang, Seungha, Talley, Nicholas J., Do, Anh, Walker, Marjorie M., Shanahan, Erin R., Koloski, Natasha A., Jones, Michael P., Keely, Simon, Morrison, Mark and Holtmann, Gerald J. (2022). The duodenal mucosa associated microbiome, visceral sensory function, immune activation and psychological comorbidities in functional gastrointestinal disorders with and without self-reported non-celiac wheat sensitivity. Gut Microbes, 14 (1) 2132078, 1-21. doi: 10.1080/19490976.2022.2132078 |
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2022 Journal Article How frequent are vancomycin-resistant enterococci in patients with primary sclerosing cholangitis and ulcerative colitis treated with oral vancomycin?Shah, Ayesha, Pakneeshan, Sahar, Jones, Michael P., Koloski, Natasha, Callaghan, Gavin, Morrison, Mark and Holtmann, Gerald (2022). How frequent are vancomycin-resistant enterococci in patients with primary sclerosing cholangitis and ulcerative colitis treated with oral vancomycin?. Indian Journal of Gastroenterology, 41 (5), 519-524. doi: 10.1007/s12664-022-01286-9 |
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2022 Journal Article Processed food as a risk factor for the development and perpetuation of Crohn’s Disease—the ENIGMA studyTrakman, Gina L., Lin, Winnie Y. Y., Hamilton, Amy L., Wilson-O’Brien, Amy L., Stanley, Annalise, Ching, Jessica Y., Yu, Jun, Mak, Joyce W. Y., Sun, Yang, Niu, Junkun, Miao, Yinglei, Lin, Xiaoqing, Feng, Rui, Chen, Minhu, Shivappa, Nitin, Hebert, James R., Morrison, Mark, Ng, Siew C. and Kamm, Michael A (2022). Processed food as a risk factor for the development and perpetuation of Crohn’s Disease—the ENIGMA study. Nutrients, 14 (17) 3627, 1-23. doi: 10.3390/nu14173627 |
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2022 Journal Article Cross‐sectional and longitudinal associations between gut microbiota composition and cognition in the second year of life: findings from the Child Health and Resident Microbes studyMatsuyama, Misa, Murtaza, Nida, Morrison, Mark, Davies, Peter S. W., Hill, Rebecca J. and Loughman, Amy (2022). Cross‐sectional and longitudinal associations between gut microbiota composition and cognition in the second year of life: findings from the Child Health and Resident Microbes study. American Journal of Medical Genetics Part B: Neuropsychiatric Genetics, 189 (7-8), 285-292. doi: 10.1002/ajmg.b.32915 |
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2022 Journal Article Links between celiac disease and small intestinal bacterial overgrowth: A systematic review and meta‐analysisShah, Ayesha, Thite, Parag, Hansen, Teressa, Kendall, Bradley J., Sanders, David S., Morrison, Mark, Jones, Michael P. and Holtmann, Gerald (2022). Links between celiac disease and small intestinal bacterial overgrowth: A systematic review and meta‐analysis. Journal of Gastroenterology and Hepatology, 37 (10), 1844-1852. doi: 10.1111/jgh.15920 |
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2022 Journal Article Childhood antibiotics as a risk factor for Crohn's disease: The ENIGMA International Cohort StudyMak, Joyce W. Y., Yang, Sun, Stanley, Annalise, Lin, Xiaoqing, Morrison, Mark, Ching, Jessica Y. L., Niu, Junkun, Wilson-O'Brien, Amy L., Feng, Rui, Tang, Whitney, Hamilton, Amy L., Or, Leo, Trakman, Gina L., Lin, Winnie Y. Y., Sung, Joseph J. Y., Chen, Ming Hu, Mao, Yinglei, Kamm, Michael A. and Ng, Siew C. (2022). Childhood antibiotics as a risk factor for Crohn's disease: The ENIGMA International Cohort Study. JGH Open, 6 (6), 369-377. doi: 10.1002/jgh3.12755 |
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2022 Journal Article Skin cancer-associated S. aureus strains can induce DNA damage in human keratinocytes by downregulating DNA repair and promoting oxidative stressKrueger, Annika, Mohamed, Ahmed, Kolka, Cathryn M., Stoll, Thomas, Zaugg, Julian, Linedale, Richard, Morrison, Mark, Soyer, H. Peter, Hugenholtz, Philip, Frazer, Ian H. and Hill, Michelle M. (2022). Skin cancer-associated S. aureus strains can induce DNA damage in human keratinocytes by downregulating DNA repair and promoting oxidative stress. Cancers, 14 (9) 2143, 2143. doi: 10.3390/cancers14092143 |
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2022 Journal Article Secreted NF-κB suppressive microbial metabolites modulate gut inflammationGiri, Rabina, Hoedt, Emily C., Khushi, Shamsunnahar, Salim, Angela A., Bergot, Anne-Sophie, Schreiber, Veronika, Thomas, Ranjeny, McGuckin, Michael A., Florin, Timothy H., Morrison, Mark, Capon, Robert J., Ó Cuív, Páraic and Begun, Jakob (2022). Secreted NF-κB suppressive microbial metabolites modulate gut inflammation. Cell Reports, 39 (2) 110646, 110646. doi: 10.1016/j.celrep.2022.110646 |
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2022 Journal Article Prebiotic supplementation in kidney transplant recipients for preventing infections and gastrointestinal upset: a randomized controlled feasibility studyChan, Samuel, Hawley, Carmel M., Pascoe, Elaine M., Cao, Christopher, Campbell, Scott B., Campbell, Katrina L., Francis, Ross S., Hale, Rachael, Isbel, Nicole M., Morrison, Mark and Johnson, David W. (2022). Prebiotic supplementation in kidney transplant recipients for preventing infections and gastrointestinal upset: a randomized controlled feasibility study. Journal of Renal Nutrition, 106 (9S), 718-725. doi: 10.1053/j.jrn.2022.02.006 |
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2022 Journal Article Changes in the skin microbiome associated with squamous cell carcinoma in transplant recipientsKrueger, Annika, Zaugg, Julian, Lachner, Nancy, Bialasiewicz, Seweryn, Lin, Lynlee L., Gabizon, Sharon, Sobarun, Priyamvada, Morrison, Mark, Soyer, H. Peter, Hugenholtz, Philip and Frazer, Ian H. (2022). Changes in the skin microbiome associated with squamous cell carcinoma in transplant recipients. ISME Communications, 2 (1) 13, 13. doi: 10.1038/s43705-022-00095-7 |
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2022 Journal Article Secreted toxins from Staphylococcus aureus strains isolated from keratinocyte skin cancers mediate pro-tumorigenic inflammatory responses in the skinKrueger, Annika, Zaugg, Julian, Chisholm, Sarah, Linedale, Richard, Lachner, Nancy, Teoh, Siok Min, Tuong, Zewen K., Lukowski, Samuel W., Morrison, Mark, Soyer, H. Peter, Hugenholtz, Philip, Hill, Michelle M. and Frazer, Ian H. (2022). Secreted toxins from Staphylococcus aureus strains isolated from keratinocyte skin cancers mediate pro-tumorigenic inflammatory responses in the skin. Frontiers in Microbiology, 12 789042, 789042. doi: 10.3389/fmicb.2021.789042 |
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2022 Journal Article Successful Manipulation of the Gut Microbiome to Treat Spontaneous and Induced Murine Models of ColitisMovva, Ramya, Murtaza, Nida, Giri, Rabina, Png, Chin Wen, Davies, Julie, Alabbas, Saleh, Oancea, Iulia, O'Cuiv, Páraic, Morrison, Mark, Begun, Jakob and Florin, Timothy H. (2022). Successful Manipulation of the Gut Microbiome to Treat Spontaneous and Induced Murine Models of Colitis. Gastro Hep Advances, 1 (3), 359-374. doi: 10.1016/j.gastha.2021.12.008 |
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2021 Journal Article Synbiotics Easing Renal Failure by Improving Gut Microbiology II (SYNERGY II): a feasibility randomized controlled trialMcFarlane, Catherine, Krishnasamy, Rathika, Stanton, Tony, Savill, Emma, Snelson, Matthew, Mihala, Gabor, Kelly, Jaimon T., Morrison, Mark, Johnson, David W. and Campbell, Katrina L. (2021). Synbiotics Easing Renal Failure by Improving Gut Microbiology II (SYNERGY II): a feasibility randomized controlled trial. Nutrients, 13 (12) 4481, 4481. doi: 10.3390/nu13124481 |
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2021 Journal Article Diet quality and protein-bound uraemic toxins: investigation of novel risk factors and the role of microbiome in chronic kidney diseaseMcFarlane, Catherine, Krishnasamy, Rathika, Stanton, Tony, Savill, Emma, Snelson, Matthew, Mihala, Gabor, Morrison, Mark, Johnson, David W. and Campbell, Katrina L. (2021). Diet quality and protein-bound uraemic toxins: investigation of novel risk factors and the role of microbiome in chronic kidney disease. Journal of Renal Nutrition, 32 (5), 542-551. doi: 10.1053/j.jrn.2021.10.003 |
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2021 Journal Article Draft genome sequence of streptococcus salivarius AGIRA0003, isolated from functional gastrointestinal disorder duodenal tissueHoedt, Emily C., Shanahan, Erin R., Keely, Simon, Shah, Ayesha, Burns, Grace L., Holtmann, Gerald J., Talley, Nicholas J. and Morrison, Mark (2021). Draft genome sequence of streptococcus salivarius AGIRA0003, isolated from functional gastrointestinal disorder duodenal tissue. Microbiology Resource Announcements, 10 (39) e00758, e0075821. doi: 10.1128/MRA.00758-21 |
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2021 Journal Article Concomitant irritable bowel syndrome does not influence the response to antimicrobial therapy in patients with functional dyspepsiaShah, Ayesha, Gurusamy, Saravana Ruban, Hansen, Teressa, Callaghan, Gavin, Talley, Nicholas J., Koloski, Natasha, Walker, Marjorie M., Jones, Michael P., Morrison, Mark and Holtmann, Gerald J. (2021). Concomitant irritable bowel syndrome does not influence the response to antimicrobial therapy in patients with functional dyspepsia. Digestive Diseases and Sciences, 67 (6), 2299-2309. doi: 10.1007/s10620-021-07149-1 |
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2021 Journal Article Novel strain-level resolution of Crohn’s disease mucosa-associated microbiota via an ex vivo combination of microbe culture and metagenomic sequencingTeh, J. J., Berendsen, E. M., Hoedt, E. C., Kang, S., Zhang, J., Zhang, F., Liu, Q., Hamilton, A. L., Wilson-O’Brien, A., Ching, J., Sung, J. J. Y., Yu, J., Ng, S. C., Kamm, M. A. and Morrison, M. (2021). Novel strain-level resolution of Crohn’s disease mucosa-associated microbiota via an ex vivo combination of microbe culture and metagenomic sequencing. The ISME Journal, 15 (11), 3326-3338. doi: 10.1038/s41396-021-00991-1 |
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2021 Journal Article Wheat-based food form has a greater effect than amylose content on fermentation outcomes and microbial community shifts in an in vitro fermentation modelBui, Alexander T., Williams, Barbara A., Murtaza, Nida, Lisle, Allan, Mikkelsen, Deirdre, Morrison, Mark and Gidley, Michael J. (2021). Wheat-based food form has a greater effect than amylose content on fermentation outcomes and microbial community shifts in an in vitro fermentation model. Food Hydrocolloids, 114 106560, 1-9. doi: 10.1016/j.foodhyd.2020.106560 |
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2021 Journal Article Chemoradiation therapy changes oral microbiome and metabolomic profiles in patients with oral cavity cancer and oropharyngeal cancerLim, Yenkai, Tang, Kai Dun, Karpe, Avinash V., Beale, David J., Totsika, Makrina, Kenny, Liz, Morrison, Mark and Punyadeera, Chamindie (2021). Chemoradiation therapy changes oral microbiome and metabolomic profiles in patients with oral cavity cancer and oropharyngeal cancer. Head and Neck, 43 (5), 1521-1534. doi: 10.1002/hed.26619 |
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2021 Journal Article Characteristics of the gastrointestinal microbiota in paired live kidney donors and recipientsChan, Samuel, Morrison, Mark, Hawley, Carmel M., Campbell, Scott B., Francis, Ross S., Isbel, Nicole M., Pascoe, Elaine M. and Johnson, David W. (2021). Characteristics of the gastrointestinal microbiota in paired live kidney donors and recipients. Nephrology, 26 (5), 471-478. doi: 10.1111/nep.13853 |
