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2011 Journal Article Draft genome sequence of Bacteroides vulgatus PC510, a strain isolated from human fecesÓ Cuív, Páraic, Klaassens, Eline S., Durkin, A. Scott, Harkins, Derek M., Foster, Les, McCorrison, Jamison, Torralba, Manolito, Nelson, Karen E. and Morrison, Mark (2011). Draft genome sequence of Bacteroides vulgatus PC510, a strain isolated from human feces. Journal of Bacteriology, 193 (15), 4025-4026. doi: 10.1128/JB.05256-11 |
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2011 Journal Article A meta-analysis of the microbial diversity observed in anaerobic digestersNelson, Michael C., Morrison, Mark and Yu, Zhongtang (2011). A meta-analysis of the microbial diversity observed in anaerobic digesters. Bioresource Technology, 102 (4), 3730-3739. doi: 10.1016/j.biortech.2010.11.119 |
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2011 Journal Article Evaluation of different partial 16S rRNA gene sequence regions for phylogenetic analysis of microbiomesKim, Minseok, Morrison, Mark and Yu, Zhongtang (2011). Evaluation of different partial 16S rRNA gene sequence regions for phylogenetic analysis of microbiomes. Journal of Microbiological Methods, 84 (1), 81-87. doi: 10.1016/j.mimet.2010.10.020 |
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2011 Journal Article Phylogenetic diversity of bacterial communities in bovine rumen as affected by diets and microenvironmentsKim, Minseok, Morrison, Mark and Yu, Zhongtang (2011). Phylogenetic diversity of bacterial communities in bovine rumen as affected by diets and microenvironments. Folia Microbiologica, 56 (5), 453-458. doi: 10.1007/s12223-011-0066-5 |
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2011 Journal Article Highlighting new phylogenetic specificities of Crohn's disease microbiotaMondot, S., Kang, S., Furet, J.P., Aguirre De Carcer, D., McSweeney, C., Morrison, M., Marteau, P., Dore, J. and Leclerc, M. (2011). Highlighting new phylogenetic specificities of Crohn's disease microbiota. Inflammatory Bowel Diseases, 17 (1), 185-192. doi: 10.1002/ibd.21436 |
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2010 Journal Article Functional gene analysis suggests different acetogen populations in the Bovine Rumen and Tammar Wallaby ForestomachGagen, Emma J., Denman, Stuart E., Padmanabha, Jagadish, Zadbuke, Someshwar, Al Jassim, Rafat, Morrison, Mark and McSweeney, Christopher S. (2010). Functional gene analysis suggests different acetogen populations in the Bovine Rumen and Tammar Wallaby Forestomach. Applied and Environmental Microbiology, 76 (23), 7785-7795. doi: 10.1128/AEM.01679-10 |
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2010 Journal Article Adaptation to herbivory by the Tammar wallaby includes bacterial and glycoside hydrolase profiles different from other herbivoresPope, P. B., Denman, S. E., Jones, M., Tringe, S. G., Barry, K., Malfatti, S. A., McHardy, A. C., Cheng, J. F., Hugenholtz, P., McSweeney, C. S. and Morrison, M. (2010). Adaptation to herbivory by the Tammar wallaby includes bacterial and glycoside hydrolase profiles different from other herbivores. Proceedings of the National Academy of Sciences of the United States of America, 107 (33), 14793-1-14798-6. doi: 10.1073/pnas.1005297107 |
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2010 Journal Article The FibRumBa database: a resource for biologists with interests in gastrointestinal microbial ecology, plant biomass degradation, and anaerobic microbiologyMorrison, Mark, Daugherty, Sean C., Nelson, William C., Davidsen, Tanja, Nelson, Karen E. and The North American Consortium for Fibrolytic Ruminal Bacteria (2010). The FibRumBa database: a resource for biologists with interests in gastrointestinal microbial ecology, plant biomass degradation, and anaerobic microbiology. Microbial Ecology, 59 (2), 212-213. doi: 10.1007/s00248-009-9562-4 |
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2010 Journal Article Dysbiosis of fecal microbiota in Crohn's disease patients as revealed by a custom phylogenetic microarrayKang, Seungha, Denman, Stuart E., Morrison, Mark, Yu, Zhongtang, Dore, Joel, Leclerc, Marion and McSweeney, Chris S. (2010). Dysbiosis of fecal microbiota in Crohn's disease patients as revealed by a custom phylogenetic microarray. Inflammatory Bowel Diseases, 16 (12), 2034-2042. doi: 10.1002/ibd.21319 |
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2010 Journal Article Comparative Genome Analysis of Prevotella ruminicola and Prevotella bryantii: Insights into Their Environmental NichePurushe, Janaki, Fouts, Derrick E., Morrison, Mark, White, Bryan A., Mackie, Roderick I., North American Consortium for Rumen Bacteria, Coutinho, Pedro M., Henrissat, Bernard and Nelson, Karen E. (2010). Comparative Genome Analysis of Prevotella ruminicola and Prevotella bryantii: Insights into Their Environmental Niche. Microbial Ecology, 60 (4), 721-729. doi: 10.1007/s00248-010-9692-8 |
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2010 Journal Article Occurrence and Persistence of Erythromycin Resistance Genes (erm) and Tetracycline Resistance Genes (tet) in Waste Treatment Systems on Swine FarmsChen, Jing, Michel Jr., Frederick C., Sreevatsan, Srinand, Morrison, Mark and Yu, Zhongtang (2010). Occurrence and Persistence of Erythromycin Resistance Genes (erm) and Tetracycline Resistance Genes (tet) in Waste Treatment Systems on Swine Farms. Microbial Ecology, 60 (3), 479-486. doi: 10.1007/s00248-010-9634-5 |
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2009 Journal Article Recent developments in nucleic acid based techniques for use in rumen manipulationMcSweeney, Christopher, Kang, Seungha, Gagen, Emma, Davis, Carl, Morrison, Mark and Denman, Stuart (2009). Recent developments in nucleic acid based techniques for use in rumen manipulation. Revista Brasileira De Zootecnia-Brazilian Journal of Animal Science, 38 (spe), 341-351. doi: 10.1590/S1516-35982009001300034 |
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2009 Journal Article Plant biomass degradation by gut microbiomes: More of the same or something new?Morrison, Mark, Pope, Phillip B., Denman, Stuart E. and McSweeney, Christopher S. (2009). Plant biomass degradation by gut microbiomes: More of the same or something new?. Current Opinion in Biotechnology, 20 (3), 358-363. doi: 10.1016/j.copbio.2009.05.004 |
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2009 Journal Article An efficient RNA extraction method for estimating gut microbial diversity by polymerase chain reactionKang, Seungha, Denham, Stuart E., Morrison, Mark, Zhongtang, Yu and McSweeney, Chris S. (2009). An efficient RNA extraction method for estimating gut microbial diversity by polymerase chain reaction. Current Microbiology, 58 (5), 464-471. doi: 10.1007/s00284-008-9345-z |
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2009 Journal Article Selected antimicrobial resistance during composting of manure from cattle administered sub-therapeutic antimicrobialsSharma, Ranjana, Larney, Francis J., Chen, Jing, Yanke, L. Jay, Morrison, Mark, Topp, Edward, McAllister, Tim A. and Yu, Zhongtang (2009). Selected antimicrobial resistance during composting of manure from cattle administered sub-therapeutic antimicrobials. Journal of Environmental Quality, 38 (2), 567-575. doi: 10.2134/jeq2007.0638 |
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2009 Journal Article Community composition and density of methanogens in the foregut of the Tammar wallaby (Macropus eugenii)Evans, Paul N., Hinds, Lyn A., Sly, Lindsay I., McSweeney, Christopher S., Morrison, Mark and Wright, Andre-Denis G. (2009). Community composition and density of methanogens in the foregut of the Tammar wallaby (Macropus eugenii). Applied and Environmental Microbiology, 75 (8), 2598-2602. doi: 10.1128/AEM.02436-08 |
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2009 Journal Article Rumen ciliated protozoa decrease generation time and adjust 18S ribosomal DNA copies to adapt to decreased transfer interval, starvation, and monensinSylvester, J.T., Karnati, S.K.R., Dehority, B.A., Morrison, M., Smith, G.L., St-Pierre, N.R. and Firkins, J.L. (2009). Rumen ciliated protozoa decrease generation time and adjust 18S ribosomal DNA copies to adapt to decreased transfer interval, starvation, and monensin. Journal of Dairy Science, 92 (1), 256-269. doi: 10.3168/jds.2008-1417 |
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2008 Journal Article Cell surface enzyme attachment is mediated by family 37 carbohydrate-binding modules, unique to Ruminococcus albusEzer, Anat, Matalon, Erez, Jindou, Sadanari, Borovok, Ilya, Atamna, Nof, Zhongtang, Yu, Morrison, Mark, Bayer, Edward A. and Lamed, Raphael (2008). Cell surface enzyme attachment is mediated by family 37 carbohydrate-binding modules, unique to Ruminococcus albus. Journal of Bacteriology, 190 (24), 8220-8222. doi: 10.1128/JB.00609-08 |
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2008 Journal Article Technical note: Occurrence in fecal microbiota of genes conferring resistance to both macrolide-lincosamide-streptogramin B and tetracyclines concomitant with feeding of beef cattle with tylosinChen, J., Fluharty, F.L., St-Pierre, N., Morrison, M. and Yu, Z. (2008). Technical note: Occurrence in fecal microbiota of genes conferring resistance to both macrolide-lincosamide-streptogramin B and tetracyclines concomitant with feeding of beef cattle with tylosin. Journal of Animal Science, 86 (9), 2385-2391. doi: 10.2527/jas.2007-0705 |
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2008 Journal Article Evaluations of different hypervariable regions of archaeal 16S rRNA Genes in profiling of methanogens by archaea-specific PCR and denaturing gradient gel electrophoresisZhongtang, Yu, García-González, Rubén, Schanbacher, Floyd L. and Morrison, Mark (2008). Evaluations of different hypervariable regions of archaeal 16S rRNA Genes in profiling of methanogens by archaea-specific PCR and denaturing gradient gel electrophoresis. Applied and Environmental Microbiology, 74 (3), 889-893. doi: 10.1128/AEM.00684-07 |
