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2018

Conference Publication

Systematic review of the use of oral antibiotic therapy in primary sclerosing cholangitis and inflammatory bowel disease

Shah, Ayesha, Burger, Daniel, Stuart, Katherine, Martin, Neal, Walker, Marjorie, Tallis, Caroline, Jones, Mike, Macdonald, Graeme, Talley, Nicholas, Morrison, Mark and Holtmann, Gerald (2018). Systematic review of the use of oral antibiotic therapy in primary sclerosing cholangitis and inflammatory bowel disease. Asian Pacific Digestive Week (APDW). Connecting Excellence on Gastroenterology and Hepatology in Asia-Pacific, Seoul, Korea, 15–18 November 2018. Richmond, VIC, Australia: Wiley-Blackwell.

Systematic review of the use of oral antibiotic therapy in primary sclerosing cholangitis and inflammatory bowel disease

2018

Conference Publication

Quantitative PCR as a novel approach to determine influence of density of bacterial colonization on health and disease

Shah, Ayesha, Shanahan, Erin, Berendsen, Erwin, Macdonald, Graeme, Rich, Justin, Ghasemi, Pegah, Hansen, Teressa, Koloski, Natasha, Burger, Daniel, Keeley, Simon, Walker, Marjorie, Talley, Nicholas, Morrison, Mark and Holtmann, Gerald (2018). Quantitative PCR as a novel approach to determine influence of density of bacterial colonization on health and disease. Asian Pacific Digestive Week (APDW). Connecting Excellence on Gastroenterology and Hepatology in Asia-Pacific, Seoul, Korea, 15–18 November 2018. Richmond, VIC, Australia: Wiley-Blackwell.

Quantitative PCR as a novel approach to determine influence of density of bacterial colonization on health and disease

2018

Journal Article

Vitamin D and the gut microbiome: a systematic review of in vivo studies

Waterhouse, Mary, Hope, Bronwyn, Krause, Lutz, Morrison, Mark, Protani, Melinda M., Zakrzewski, Martha and Neale, Rachel E. (2018). Vitamin D and the gut microbiome: a systematic review of in vivo studies. European Journal of Nutrition, 58 (7), 2895-2910. doi: 10.1007/s00394-018-1842-7

Vitamin D and the gut microbiome: a systematic review of in vivo studies

2018

Journal Article

A natural history of actinic keratosis and cutaneous squamous cell carcinoma microbiomes

Wood, David L. A., Lachner, Nancy, Tan, Jean-Marie, Tang, Stephanie, Angel, Nicola, Laino, Antonia, Linedale, Richard, Lê Cao, Kim-Anh, Morrison, Mark, Frazer, Ian H., Soyer, H. Peter and Hugenholtz, Philip (2018). A natural history of actinic keratosis and cutaneous squamous cell carcinoma microbiomes. MBio, 9 (5) e01432-18. doi: 10.1128/mBio.01432-18

A natural history of actinic keratosis and cutaneous squamous cell carcinoma microbiomes

2018

Conference Publication

Bile Acids, Hepatic Steatosis and Gut Microbiome in Patients Undergoing Dietary Intervention for Non-Alcoholic Fatty Liver Disease

Wang, Zhenayi, Properzi, Catherine, Liddle, Christopher, Melton, Phillip, Ariff, Amir, O'Sullivan, Therese, Sherriff, Jill, Coulter, Sally, Christophersen, Claus, Morrison, Mark, Jeffrey, Gary P. and Adams, Leon A. (2018). Bile Acids, Hepatic Steatosis and Gut Microbiome in Patients Undergoing Dietary Intervention for Non-Alcoholic Fatty Liver Disease. Annual Meeting of the American-Association-for-the-Study-of-Liver-Diseases (AASLD) / Liver Meeting, San Francisco Ca, Nov 09-13, 2018. HOBOKEN: WILEY. doi: 10.1002/hep.30076

Bile Acids, Hepatic Steatosis and Gut Microbiome in Patients Undergoing Dietary Intervention for Non-Alcoholic Fatty Liver Disease

2018

Conference Publication

Small intestinal bacterial overgrowth in patients with irritable bowel syndrome-type symptoms and use of proton pump inhibitors: Systematic review and meta-analysis

Shah, A., Talley, N. J., Rich, J., Ghasemi, P., Jones, M., Kendall, B. J., Burger, D., Koloski, N., Walker, M., Morrison, M. and Holtmann, G. (2018). Small intestinal bacterial overgrowth in patients with irritable bowel syndrome-type symptoms and use of proton pump inhibitors: Systematic review and meta-analysis. HOBOKEN: WILEY.

Small intestinal bacterial overgrowth in patients with irritable bowel syndrome-type symptoms and use of proton pump inhibitors: Systematic review and meta-analysis

2018

Conference Publication

Non-celiac wheat sensitivity and small intestinal mucosal immune activation are associated with specific alterations in small intestinal mucosa-associated microbiome

Holtmann, G., Do, A., Walker, M. M., Shah, A., Shanahan, E., Morrison, M., Koloski, N., Potter, M., Keely, S., Jones, M. and Talley, N. (2018). Non-celiac wheat sensitivity and small intestinal mucosal immune activation are associated with specific alterations in small intestinal mucosa-associated microbiome. HOBOKEN: WILEY.

Non-celiac wheat sensitivity and small intestinal mucosal immune activation are associated with specific alterations in small intestinal mucosa-associated microbiome

2018

Journal Article

A novel treatment for patients with constipation: dawn of a new age for translational microbiome research?

Shah, Ayesha, Morrison, Mark and Holtmann, Gerald (2018). A novel treatment for patients with constipation: dawn of a new age for translational microbiome research?. Indian Journal of Gastroenterology, 37 (5), 388-391. doi: 10.1007/s12664-018-0912-3

A novel treatment for patients with constipation: dawn of a new age for translational microbiome research?

2018

Conference Publication

Quantitative polymerase chain reaction as a novel approach to determine influence of density of bacterial colonization on health and disease

Shah, A., Shanahan, E., Berendsen, E., Macdonald, G., Rich, J., Ghasemi, P., Hansen, T., Koloski, N., Burger, D., Keely, S., Walker, M., Talley, N. J., Morrison, M. and Holtmann, G. (2018). Quantitative polymerase chain reaction as a novel approach to determine influence of density of bacterial colonization on health and disease. Gastroenterological Society of Australia (GESA) Australian Gastroenterology Week (AGW) “Gut Matters”, Brisbane, QLD Australia, 8-10 September 2018. Richmond, VIC Australia: John Wiley & Sons.

Quantitative polymerase chain reaction as a novel approach to determine influence of density of bacterial colonization on health and disease

2018

Conference Publication

Perturbation of the gut-brain axis as the mechanism of action for weight reduction in patients treated with a duodenal-jejunal bypass sleeve

Mcmaster, J. J., Rich, G. G., Shanahan, E. R., Do, A. T., Fletcher, L. M., Kutyla, M. J., Tallis, C., Macdonald, G. A., Chachay, V. S., Morrison, M. and Holtmann, G. J. (2018). Perturbation of the gut-brain axis as the mechanism of action for weight reduction in patients treated with a duodenal-jejunal bypass sleeve. Gastroenterological Society of Australia (GESA) Australian Gastroenterology Week (AGW) “Gut Matters”, Brisbane, QLD Australia, 8-10 September 2018. Richmond, VIC Australia: John Wiley & Sons.

Perturbation of the gut-brain axis as the mechanism of action for weight reduction in patients treated with a duodenal-jejunal bypass sleeve

2018

Journal Article

Influence of cigarette smoking on the human duodenal mucosa-associated microbiota

Shanahan, Erin R., Shah, Ayesha, Koloski, Natasha, Walker, Marjorie M., Talley, Nicholas J., Morrison, Mark and Holtmann, Gerald J. (2018). Influence of cigarette smoking on the human duodenal mucosa-associated microbiota. Microbiome, 6 (1) 150, 150. doi: 10.1186/s40168-018-0531-3

Influence of cigarette smoking on the human duodenal mucosa-associated microbiota

2018

Journal Article

The performance of an oral microbiome biomarker panel in predicting oral cavity and oropharyngeal cancers

Lim, Yenkai, Fukuma, Naoki, Totsika, Makrina, Kenny, Liz, Morrison, Mark and Punyadeera, Chamindie (2018). The performance of an oral microbiome biomarker panel in predicting oral cavity and oropharyngeal cancers. Frontiers in Cellular and Infection Microbiology, 8 (AUG) 267, 267. doi: 10.3389/fcimb.2018.00267

The performance of an oral microbiome biomarker panel in predicting oral cavity and oropharyngeal cancers

2018

Journal Article

Culture- and metagenomics-enabled analyses of the Methanosphaera genus reveals their monophyletic origin and differentiation according to genome size

Hoedt, Emily C., Parks, Donovan H., Volmer, James G., Rosewarne, Carly P., Denman, Stuart E., McSweeney, Christopher S., Muir, Jane G., Gibson, Peter R., Cuív, Páraic Ó, Hugenholtz, Philip, Tyson, Gene W. and Morrison, Mark (2018). Culture- and metagenomics-enabled analyses of the Methanosphaera genus reveals their monophyletic origin and differentiation according to genome size. ISME Journal, 12 (12), 2942-2953. doi: 10.1038/s41396-018-0225-7

Culture- and metagenomics-enabled analyses of the Methanosphaera genus reveals their monophyletic origin and differentiation according to genome size

2018

Journal Article

A vegetarian diet is a major determinant of gut microbiota composition in early pregnancy

Barrett, Helen L., Gomez-Arango, Luisa F., Wilkinson, Shelley A., McIntyre, H. David, Callaway, Leonie K., Morrison, Mark and Dekker Nitert, Marloes (2018). A vegetarian diet is a major determinant of gut microbiota composition in early pregnancy. Nutrients, 10 (7) 890, 890. doi: 10.3390/nu10070890

A vegetarian diet is a major determinant of gut microbiota composition in early pregnancy

2018

Journal Article

Growth and protein-rich food intake in infancy is associated with fat-free mass index at 2-3 years of age

Smith-Brown, Paula, Morrison, Mark, Krause, Lutz, Newby, Ruth and Davies, Peter Sw (2018). Growth and protein-rich food intake in infancy is associated with fat-free mass index at 2-3 years of age. Journal of Paediatrics and Child Health, 54 (7), 770-775. doi: 10.1111/jpc.13863

Growth and protein-rich food intake in infancy is associated with fat-free mass index at 2-3 years of age

2018

Journal Article

Proteus spp. as putative gastrointestinal pathogens

Hamilton, Amy L., Kamm, Michael A., Ng, Siew C. and Morrison, Mark (2018). Proteus spp. as putative gastrointestinal pathogens. Clinical Microbiology Reviews, 31 (3) e00085-17. doi: 10.1128/CMR.00085-17

Proteus spp. as putative gastrointestinal pathogens

2018

Journal Article

Dietary fiber intervention on gut microbiota composition in healthy adults: a systematic review and meta-analysis

So, Daniel, Whelan, Kevin, Rossi, Megan, Morrison, Mark, Holtmann, Gerald, Kelly, Jaimon T., Shanahan, Erin R., Staudacher, Heidi M. and Campbell, Katrina L. (2018). Dietary fiber intervention on gut microbiota composition in healthy adults: a systematic review and meta-analysis. The American Journal of Clinical Nutrition, 107 (6), 965-983. doi: 10.1093/ajcn/nqy041

Dietary fiber intervention on gut microbiota composition in healthy adults: a systematic review and meta-analysis

2018

Journal Article

Food starch structure impacts gut microbiome composition

Warren, Frederick J., Fukuma, Naoki M., Mikkelsen, Deirdre, Flanagan, Bernadine M., Williams, Barbara A., Lisle, Allan T., Ó Cuív, Páraic, Morrison, Mark and Gidley, Michael J. (2018). Food starch structure impacts gut microbiome composition. mSphere, 3 (3) e00086-18. doi: 10.1128/mSphere.00086-18

Food starch structure impacts gut microbiome composition

2018

Conference Publication

Not all fibres created equal: a systematic review and meta-analysis of dietary fibre and the gastrointestinal microbiota

So, Daniel, Whelan, Kevin, Rossi, Megan, Morrison, Mark, Holtmann, Gerald, Kelly, Jaimon, Shanahan, Erin, Staudacher, Heidi and Campbell, Katrina (2018). Not all fibres created equal: a systematic review and meta-analysis of dietary fibre and the gastrointestinal microbiota. Dietitians Association of Australia, 35th National Conference “Think Big”, Sydney, NSW, Australia, 17–19 May 2018. Richmond, VIC, Australia: John Wiley & Sons.

Not all fibres created equal: a systematic review and meta-analysis of dietary fibre and the gastrointestinal microbiota

2018

Conference Publication

Natural history of bacterial composition in skin wounds and its relationship to healing

Khosrotehrani, K., Matigian, N., Baz, B., Legrand, J., Muller, N., Morrison, M. and Walker, G. (2018). Natural history of bacterial composition in skin wounds and its relationship to healing. International Investigative Dermatology (IID) Meeting, Orlando, FL United States, 16-19 May 2018. New York, NY United States: Elsevier.

Natural history of bacterial composition in skin wounds and its relationship to healing