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2022 Journal Article Cyanogenesis in the Sorghum Genus: From Genotype to PhenotypeCowan, Max, Møller, Birger Lindberg, Norton, Sally, Knudsen, Camilla, Crocoll, Christoph, Furtado, Agnelo, Henry, Robert, Blomstedt, Cecilia and Gleadow, Roslyn M. (2022). Cyanogenesis in the Sorghum Genus: From Genotype to Phenotype. Genes, 13 (1) 140, 1-17. doi: 10.3390/genes13010140 |
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2022 Journal Article Comparison of the root, leaf and internode transcriptomes in sugarcane (Saccharum spp. hybrids)Mason, Patrick J., Hoang, Nam V., Botha, Frederik C., Furtado, Agnelo, Marquardt, Annelie and Henry, Robert J. (2022). Comparison of the root, leaf and internode transcriptomes in sugarcane (Saccharum spp. hybrids). Current Research in Biotechnology, 4, 167-178. doi: 10.1016/j.crbiot.2022.02.005 |
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2021 Journal Article Limited allele-specific gene expression in highly polyploid sugarcaneRodrigues Alves Margarido, Gabriel, Correr, Fernando Henrique, Furtado, Agnelo, Botha, Frederik C. and Henry, Robert J. (2021). Limited allele-specific gene expression in highly polyploid sugarcane. Genome Research, 32 (2), 297-308. doi: 10.1101/gr.275904.121 |
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2021 Journal Article The genome of the endangered Macadamia jansenii displays little diversity but represents an important genetic resource for plant breedingSharma, Priyanka, Murigneux, Valentine, Haimovitz, Jasmine, Nock, Catherine J., Tian, Wei, Kharabian Masouleh, Ardashir, Topp, Bruce, Alam, Mobashwer, Furtado, Agnelo and Henry, Robert J. (2021). The genome of the endangered Macadamia jansenii displays little diversity but represents an important genetic resource for plant breeding. Plant Direct, 5 (12) e364, e364. doi: 10.1002/pld3.364 |
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2021 Journal Article Single kernel sorting of high and normal oleic acid peanuts using near infrared spectroscopyO’Connor, Daniel J., Meder, Roger, Furtado, Angelo, Henry, Robert J., Wright, Graeme C. and Rachaputi, Rao C.N. (2021). Single kernel sorting of high and normal oleic acid peanuts using near infrared spectroscopy. Journal of Near Infrared Spectroscopy, 29 (6), 366-370. doi: 10.1177/09670335211053502 |
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2021 Journal Article Denovo chromosome level assembly of a plant genome from long read sequence dataSharma, Priyanka, Kharabian Masouleh, Ardashir, Topp, Bruce, Furtado, Agnelo and Henry, Robert J. (2021). Denovo chromosome level assembly of a plant genome from long read sequence data. The Plant Journal, 109 (3), 727-736. doi: 10.1111/tpj.15583 |
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2021 Journal Article Secondary genepool of Australian Cajanus species contains sources of resistance to Helicoverpa armigera (Hübner)Vanambathina, Prameela, Henry, Robert J., Rachaputi, Rao C. N. and Furtado, Agnelo (2021). Secondary genepool of Australian Cajanus species contains sources of resistance to Helicoverpa armigera (Hübner). Annals of Applied Biology, 180 (2), 259-272. doi: 10.1111/aab.12730 |
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2021 Journal Article The jojoba genome reveals wide divergence of the sex chromosomes in a dioecious plantAl‐Dossary, Othman, Alsubaie, Bader, Kharabian‐Masouleh, Ardashir, Al‐Mssallem, Ibrahim, Furtado, Agnelo and Henry, Robert J (2021). The jojoba genome reveals wide divergence of the sex chromosomes in a dioecious plant. The Plant Journal, 108 (5), 1283-1294. doi: 10.1111/tpj.15509 |
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2021 Journal Article Identification of genes associated with chapatti quality using transcriptome analysisSurvase, Abhijeet, Furtado, Agnelo, Thengane, Ratnakar and Henry, Robert (2021). Identification of genes associated with chapatti quality using transcriptome analysis. Journal of Cereal Science, 101 103276, 1-11. doi: 10.1016/j.jcs.2021.103276 |
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2021 Journal Article Phylogenetic relationships in the Sorghum genus based on sequencing of the chloroplast and nuclear genesAnanda, Galaihalage, Norton, Sally, Blomstedt, Cecilia, Furtado, Agnelo, Møller, Birger, Gleadow, Roslyn and Henry, Robert (2021). Phylogenetic relationships in the Sorghum genus based on sequencing of the chloroplast and nuclear genes. The Plant Genome, 14 (3) e20123, e20123. doi: 10.1002/tpg2.20123 |
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2021 Journal Article Fragrance in Pandanus amaryllifolius Roxb. Despite the presence of a betaine aldehyde dehydrogenase 2Bhatt, Vacha, Barvkar, Vitthal T., Furtado, Agnelo, Henry, Robert J. and Nadaf, Altafhusain (2021). Fragrance in Pandanus amaryllifolius Roxb. Despite the presence of a betaine aldehyde dehydrogenase 2. International Journal of Molecular Sciences, 22 (13) 6968, 1-18. doi: 10.3390/ijms22136968 |
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2021 Journal Article Improvements in the sequencing and assembly of plant genomesSharma, Priyanka, Al-Dossary, Othman, Alsubaie, Bader, Al-Mssallem, Ibrahim, Nath, Onkar, Mitter, Neena, Rodrigues Alves Margarido, Gabriel, Topp, Bruce, Murigneux, Valentine, Kharabian Masouleh, Ardashir, Furtado, Agnelo and Henry, Robert J. (2021). Improvements in the sequencing and assembly of plant genomes. Gigabyte, 2021, 1-10. doi: 10.46471/gigabyte.24 |
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2021 Journal Article Pests, diseases, and aridity have shaped the genome of Corymbia citriodoraHealey, Adam L., Shepherd, Mervyn, King, Graham J., Butler, Jakob B., Freeman, Jules S., Lee, David J., Potts, Brad M., Silva-Junior, Orzenil B., Baten, Abdul, Jenkins, Jerry, Shu, Shengqiang, Lovell, John T., Sreedasyam, Avinash, Grimwood, Jane, Furtado, Agnelo, Grattapaglia, Dario, Barry, Kerrie W., Hundley, Hope, Simmons, Blake A., Schmutz, Jeremy, Vaillancourt, René E. and Henry, Robert J. (2021). Pests, diseases, and aridity have shaped the genome of Corymbia citriodora. Communications Biology, 4 (1) 537, 1-13. doi: 10.1038/s42003-021-02009-0 |
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2021 Journal Article Association of gene expression with syringyl to guaiacyl ratio in sugarcane ligninHodgson-Kratky, K., Perlo, V., Furtado, A., Choudhary, H., Gladden, J. M., Simmons, B. A., Botha, F. and Henry, R. J. (2021). Association of gene expression with syringyl to guaiacyl ratio in sugarcane lignin. Plant Molecular Biology, 106 (1-2), 173-192. doi: 10.1007/s11103-021-01136-w |
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2020 Journal Article Comparison of long-read methods for sequencing and assembly of a plant genomeMurigneux, Valentine, Rai, Subash Kumar, Furtado, Agnelo, Bruxner, Timothy J. C., Tian, Wei, Harliwong, Ivon, Wei, Hanmin, Yang, Bicheng, Ye, Qianyu, Anderson, Ellis, Mao, Qing, Drmanac, Radoje, Wang, Ou, Peters, Brock A, Xu, Mengyang, Wu, Pei, Topp, Bruce, Coin, Lachlan J. M. and Henry, Robert J. (2020). Comparison of long-read methods for sequencing and assembly of a plant genome. GigaScience, 9 (12) giaa146. doi: 10.1093/gigascience/giaa146 |
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2020 Journal Article Variation in sugarcane biomass composition and enzymatic saccharification of leaves, internodes and rootsMason, Patrick J., Furtado, Agnelo, Marquardt, Annelie, Hodgson-Kratky, Katrina, Hoang, Nam V., Botha, Frederik C., Papa, Gabriella, Mortimer, Jenny C., Simmons, Blake and Henry, Robert J. (2020). Variation in sugarcane biomass composition and enzymatic saccharification of leaves, internodes and roots. Biotechnology for Biofuels, 13 (1) 201, 1-19. doi: 10.1186/s13068-020-01837-2 |
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2020 Journal Article Pathways of photosynthesis in non-leaf tissuesHenry, Robert J., Furtado, Agnelo and Rangan, Parimalan (2020). Pathways of photosynthesis in non-leaf tissues. Biology, 9 (12) 438, 1-13. doi: 10.3390/biology9120438 |
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2020 Journal Article Sequence variants linked to key traits in interspecific crosses between African and Asian riceBadro, Hayba, Ndjiondjop, Marie-Noelle, Furtado, Agnelo and Henry, Robert (2020). Sequence variants linked to key traits in interspecific crosses between African and Asian rice. Plants, 9 (12) 1653, 1-21. doi: 10.3390/plants9121653 |
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2020 Journal Article Metabolic changes in the developing sugarcane culm associated with high yield and early high sugar contentPerlo, Virginie, Botha, Frederik C., Furtado, Agnelo, Hodgson‐Kratky, Katrina and Henry, Robert J. (2020). Metabolic changes in the developing sugarcane culm associated with high yield and early high sugar content. Plant Direct, 4 (11) e00276, e00276. doi: 10.1002/pld3.276 |
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2020 Journal Article Two divergent chloroplast genome sequence clades captured in the domesticated rice gene pool may have significance for rice productionMoner, Ali Mohammad, Furtado, Agnelo and Henry, Robert J. (2020). Two divergent chloroplast genome sequence clades captured in the domesticated rice gene pool may have significance for rice production. BMC Plant Biology, 20 (1) 472, 1-9. doi: 10.1186/s12870-020-02689-6 |
