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2020 Journal Article Differential expression in leaves of Saccharum genotypes contrasting in biomass production provides evidence of genes involved in carbon partitioningCorrer, Fernando Henrique, Hosaka, Guilherme Kenichi, Barreto, Fernanda Zatti, Valadão, Isabella Barros, Balsalobre, Thiago Willian Almeida, Furtado, Agnelo, Henry, Robert James, Carneiro, Monalisa Sampaio and Margarido, Gabriel Rodrigues Alves (2020). Differential expression in leaves of Saccharum genotypes contrasting in biomass production provides evidence of genes involved in carbon partitioning. BMC Genomics, 21 (1) 673, 673. doi: 10.1186/s12864-020-07091-y |
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2020 Journal Article Wild sorghum as a promising resource for crop improvementAnanda, Galaihalage K. S., Myrans, Harry, Norton, Sally L., Gleadow, Roslyn, Furtado, Agnelo and Henry, Robert J. (2020). Wild sorghum as a promising resource for crop improvement. Frontiers in Plant Science, 11 1108, 1108. doi: 10.3389/fpls.2020.01108 |
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2020 Journal Article Slower development of lower canopy beans produces better coffeeCheng, Bing, Smyth, Heather E., Furtado, Agnelo and Henry, Robert J. (2020). Slower development of lower canopy beans produces better coffee. Journal of Experimental Botany, 71 (14), 4201-4214. doi: 10.1093/jxb/eraa151 |
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2020 Journal Article Structural elements that modulate the substrate specificity of plant purple acid phosphatases: avenues for improved phosphorus acquisition in cropsFeder, Daniel, McGeary, Ross P., Mitić, Natasa, Lonhienne, Thierry, Furtado, Agnelo, Schulz, Benjamin L., Henry, Robert J., Schmidt, Susanne, Guddat, Luke W. and Schenk, Gerhard (2020). Structural elements that modulate the substrate specificity of plant purple acid phosphatases: avenues for improved phosphorus acquisition in crops. Plant Science, 294 110445, 110445. doi: 10.1016/j.plantsci.2020.110445 |
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2020 Journal Article Transcriptome profiling of wheat genotypes under heat stress during grain-fillingRangan, Parimalan, Furtado, Agnelo and Henry, Robert (2020). Transcriptome profiling of wheat genotypes under heat stress during grain-filling. Journal of Cereal Science, 91 102895, 102895. doi: 10.1016/j.jcs.2019.102895 |
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2019 Journal Article Relationships between Iraqi rice varieties at the nuclear and plastid genome levelsBadro, Hayba, Furtado, Agnelo and Henry, Robert (2019). Relationships between Iraqi rice varieties at the nuclear and plastid genome levels. Plants, 8 (11) 481, 481. doi: 10.3390/plants8110481 |
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2019 Journal Article Relationship between sugarcane culm and leaf biomass composition and saccharification efficiencyHodgson-Kratky, K., Papa, G., Rodriguez, A., Stavila, V., Simmons, B., Botha, F., Furtado, A. and Henry, R. (2019). Relationship between sugarcane culm and leaf biomass composition and saccharification efficiency. Biotechnology for Biofuels, 12 (1) 247, 247. doi: 10.1186/s13068-019-1588-3 |
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2019 Journal Article Evaluation of chloroplast genome annotation tools and application to analysis of the evolution of coffee speciesGuyeux, Christophe, Charr, Jean-Claude, Tran, Hue T. M., Furtado, Agnelo, Henry, Robert J., Crouzillat, Dominique, Guyot, Romain and Hamon, Perla (2019). Evaluation of chloroplast genome annotation tools and application to analysis of the evolution of coffee species. PLoS One, 14 (6) e0216347, e0216347. doi: 10.1371/journal.pone.0216347 |
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2019 Journal Article Analysis of the diversity and tissue specificity of sucrose synthase genes in the long read transcriptome of sugarcaneThirugnanasambandam, Prathima P., Mason, Patrick J., Hoang, Nam V., Furtado, Agnelo, Botha, Frederik C. and Henry, Robert J. (2019). Analysis of the diversity and tissue specificity of sucrose synthase genes in the long read transcriptome of sugarcane. BMC Plant Biology, 19 (1) 160, 160. doi: 10.1186/s12870-019-1733-y |
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2019 Journal Article Analysis of the expression of transcription factors and other genes associated with aleurone layer development in wheat endospermNirmal, Ravi C., Singh, Amit Kumar, Furtado, Agnelo and Henry, Robert J. (2019). Analysis of the expression of transcription factors and other genes associated with aleurone layer development in wheat endosperm. Journal of Cereal Science, 85, 62-69. doi: 10.1016/j.jcs.2018.11.010 |
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2019 Journal Article The impact of cDNA normalization on long-read sequencing of a complex transcriptomeHoang, Nam V., Furtado, Agnelo, Perlo, Virginie, Botha, Frederik C. and Henry, Robert (2019). The impact of cDNA normalization on long-read sequencing of a complex transcriptome. Frontiers in Genetics, 10 (JUN) 654, 654. doi: 10.3389/fgene.2019.00654 |
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2018 Journal Article Differential response of wheat genotypes to heat stress during grain fillingRangan, Parimalan, Furtado, Agnelo and Henry, Robert (2018). Differential response of wheat genotypes to heat stress during grain filling. Experimental Agriculture, 55 (5), 818-827. doi: 10.1017/s0014479718000406 |
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2018 Journal Article Breeding for improved blanchability in peanut: phenotyping, genotype × environment interaction and selectionWright, G. C., Borgognone, M. G., Connor, D. J.O., Rachaputi, R. C.N., Henry, R. J., Furtado, A., Anglin, N. L. and Freischfresser, D. B. (2018). Breeding for improved blanchability in peanut: phenotyping, genotype × environment interaction and selection. Crop & Pasture Science, 69 (12), 1237-1250. doi: 10.1071/CP18156 |
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2018 Journal Article SNP in the Coffea arabica genome associated with coffee qualityTran, Hue T. M., Furtado, Agnelo, Vargas, Carlos Alberto Cordero, Smyth, Heather, Lee, L. Slade and Henry, Robert (2018). SNP in the Coffea arabica genome associated with coffee quality. Tree Genetics & Genomes, 14 (5) 72. doi: 10.1007/s11295-018-1282-9 |
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2018 Journal Article Transcriptome analysis highlights key differentially expressed genes involved in cellulose and lignin biosynthesis of sugarcane genotypes varying in fiber contentKasirajan, Lakshmi, Hoang, Nam V., Furtado, Agnelo, Botha, Frederik C. and Henry, Robert J. (2018). Transcriptome analysis highlights key differentially expressed genes involved in cellulose and lignin biosynthesis of sugarcane genotypes varying in fiber content. Scientific Reports, 8 (1) 11612, 11612. doi: 10.1038/s41598-018-30033-4 |
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2018 Journal Article The coffee bean transcriptome explains the accumulation of the major bean components through ripeningCheng, Bing, Furtado, Agnelo and Henry, Robert J. (2018). The coffee bean transcriptome explains the accumulation of the major bean components through ripening. Scientific Reports, 8 (1) 11414, 11414. doi: 10.1038/s41598-018-29842-4 |
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2018 Journal Article Wheat seed transcriptome reveals genes controlling key traits for human preference and crop adaptationHenry, Robert J., Furtado, Agnelo and Rangan, Parimalan (2018). Wheat seed transcriptome reveals genes controlling key traits for human preference and crop adaptation. Current Opinion in Plant Biology, 45 (Pt B), 231-236. doi: 10.1016/j.pbi.2018.05.002 |
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2018 Journal Article Chloroplast phylogeny of AA genome rice speciesMohammad Moner, Ali, Furtado, Agnelo and Henry, Robert J (2018). Chloroplast phylogeny of AA genome rice species. Molecular Phylogenetics and Evolution, 127, 475-487. doi: 10.1016/j.ympev.2018.05.002 |
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2018 Journal Article Diversity and evolution of rice progenitors in AustraliaMoner, Ali M., Furtado, Agnelo, Chivers, Ian, Fox, Glen, Crayn, Darren and Henry, Robert J. (2018). Diversity and evolution of rice progenitors in Australia. Ecology and Evolution, 8 (8), 4360-4366. doi: 10.1002/ece3.3989 |
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2018 Journal Article De novo assembly and characterizing of the culm-derived meta-transcriptome from the polyploid sugarcane genome based on coding transcriptsHoang, Nam V., Furtado, Agnelo, Thirugnanasambandam, Prathima P., Botha, Frederik C. and Henry, Robert J. (2018). De novo assembly and characterizing of the culm-derived meta-transcriptome from the polyploid sugarcane genome based on coding transcripts. Heliyon, 4 (3) e00583, e00583. doi: 10.1016/j.heliyon.2018.e00583 |