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2024 Journal Article A proteome‐wide analysis unveils a core Epstein–Barr virus antibody signature of classic Hodgkin lymphoma across ethnically diverse populationsSarathkumara, Yomani D., Xian, Rena R., Liu, Zhiwei, Yu, Kelly J., Chan, John K. C., Kwong, Yok‐Lam, Lam, Tai Hing, Liang, Raymond, Chiu, Brian, Xu, Jun, Hu, Wei, Ji, Bu‐Tian, Coghill, Anna E., Kelly, Ashton M., Pfeiffer, Ruth M., Rothman, Nathaniel, Ambinder, Richard F., Hildesheim, Allan, Lan, Qing, Proietti, Carla and Doolan, Denise L. (2024). A proteome‐wide analysis unveils a core Epstein–Barr virus antibody signature of classic Hodgkin lymphoma across ethnically diverse populations. International Journal of Cancer, 155 (8), 1476-1486. doi: 10.1002/ijc.35072 |
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2024 Journal Article Optimization and application of bacterial environmental DNA and RNA isolation for qualitative and quantitative studiesBrowne, Daniel J., Miller, Catherine M., O'Hara, Emily P., Courtney, Robert, Seymour, Jamie, Doolan, Denise L. and Orr, Ryan (2024). Optimization and application of bacterial environmental DNA and RNA isolation for qualitative and quantitative studies. Environmental DNA, 6 (4) e589. doi: 10.1002/edn3.589 |
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2024 Journal Article Technical pitfalls when collecting, cryopreserving, thawing, and stimulating human T-cellsBrowne, Daniel J., Miller, Catherine M. and Doolan, Denise L. (2024). Technical pitfalls when collecting, cryopreserving, thawing, and stimulating human T-cells. Frontiers in Immunology, 15 1382192. doi: 10.3389/fimmu.2024.1382192 |
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2023 Journal Article Evaluating the stability of host-reference gene expression and simultaneously quantifying parasite burden and host immune responses in murine malariaBrowne, Daniel J., Kelly, Ashton M., Brady, Jamie, Proietti, Carla, Sarathkumara, Yomani D., Pattinson, David J. and Doolan, Denise L. (2023). Evaluating the stability of host-reference gene expression and simultaneously quantifying parasite burden and host immune responses in murine malaria. Scientific Reports, 13 (1) 21071, 1-11. doi: 10.1038/s41598-023-48066-9 |
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2023 Journal Article Association of serum microRNAs with abdominal aortic aneurysm diagnosis and growthThanigaimani, Shivshankar, Iyer, Vikram, Bingley, John, Browne, Daniel, Phie, James, Doolan, Denise and Golledge, Jonathan (2023). Association of serum microRNAs with abdominal aortic aneurysm diagnosis and growth. European Journal of Vascular and Endovascular Surgery, 65 (4), 573-581. doi: 10.1016/j.ejvs.2022.12.028 |
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2023 Journal Article Comparative analysis of the humoral immune response to the EBV proteome across EBV-related malignanciesArgirion, Ilona, Pfeiffer, Ruth M., Proietti, Carla, Coghill, Anna E., Yu, Kelly J., Middeldorp, Jaap M., Sarathkumara, Yomani D., Hsu, Wan-Lun, Chien, Yin-Chu, Lou, Pei-Jen, Wang, Cheng-Ping, Rothman, Nathaniel, Lan, Qing, Chen, Chien-Jen, Mbulaiteye, Sam M., Jarrett, Ruth F., Glimelius, Ingrid, Smedby, Karin E., Hjalgrim, Henrik, Hildesheim, Allan, Doolan, Denise L. and Liu, Zhiwei (2023). Comparative analysis of the humoral immune response to the EBV proteome across EBV-related malignancies. Cancer Epidemiology, Biomarkers and Prevention, 32 (5), OF1-OF10. doi: 10.1158/1055-9965.epi-22-0452 |
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2023 Journal Article Recommendations for Epstein-Barr virus-based screening for nasopharyngeal cancer in high- and intermediate-risk regionsLam, W K Jacky, King, Ann D, Miller, Jacob A, Liu, Zhiwei, Yu, Kelly J, Chua, Melvin L K, Ma, Brigette B Y, Chen, Ming Yuan, Pinsky, Benjamin A, Lou, Pei-Jen, Woo, John K S, Hsu, Wan-Lun, Simon, Julia, Doolan, Denise L, Waterboer, Tim, Hui, Edwin P, Li, Hui, Tsang, Raymond K, Wong, Kenneth C W, Goh, Julian P, Vlantis, Alexander C, Ai, Qi Yong, Wong, Lun M, Abdullah, Victor, Lin, Jin Ching, Chen, Chien-Jen, Pfeiffer, Ruth M, Le, Quynh-Thu, Lee, Anne W M ... Hildesheim, Allan (2023). Recommendations for Epstein-Barr virus-based screening for nasopharyngeal cancer in high- and intermediate-risk regions. JNCI: Journal of the National Cancer Institute, 115 (4), 355-364. doi: 10.1093/jnci/djad012 |
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2022 Journal Article Characterizing and correcting immune dysfunction in non-tuberculous mycobacterial diseaseRatnatunga, Champa N., Tungatt, Katie, Proietti, Carla, Halstrom, Sam, Holt, Michael R., Lutzky, Viviana P., Price, Patricia, Doolan, Denise L., Bell, Scott C., Field, Matt A., Kupz, Andreas, Thomson, Rachel M. and Miles, John J. (2022). Characterizing and correcting immune dysfunction in non-tuberculous mycobacterial disease. Frontiers in Immunology, 13 1047781, 1-20. doi: 10.3389/fimmu.2022.1047781 |
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2022 Journal Article Novel antiinflammatory biologics shaped by parasite-host coevolutionRyan, Stephanie M., Ruscher, Roland, Johnston, Wayne A., Pickering, Darren A., Kennedy, Malcolm W., Smith, Brian O., Jones, Linda, Buitrago, Geraldine, Field, Matt A., Esterman, Adrian J., McHugh, Connor P., Browne, Daniel J., Cooper, Martha M., Ryan, Rachael Y M, Doolan, Denise L., Engwerda, Christian R., Miles, Kim, Mitreva, Makedonka, Croese, John, Rahman, Tony, Alexandrov, Kirill, Giacomin, Paul R. and Loukas, Alex (2022). Novel antiinflammatory biologics shaped by parasite-host coevolution. Proceedings of the National Academy of Sciences of the United States of America, 119 (36) 2202795119, 1-9. doi: 10.1073/pnas.2202795119 |
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2022 Journal Article The effect of tropical temperatures on the quality of RNA extracted from stabilized whole-blood samplesSarathkumara, Yomani D., Browne, Daniel J., Kelly, Ashton M., Pattinson, David J., Rush, Catherine M., Warner, Jeffrey, Proietti, Carla and Doolan, Denise L. (2022). The effect of tropical temperatures on the quality of RNA extracted from stabilized whole-blood samples. International Journal of Molecular Sciences, 23 (18) 10609, 1-15. doi: 10.3390/ijms231810609 |
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2022 Journal Article A high-throughput screening RT-qPCR assay for quantifying surrogate markers of immunity from PBMCsBrowne, Daniel J., Kelly, Ashton M., Brady, Jamie L. and Doolan, Denise L. (2022). A high-throughput screening RT-qPCR assay for quantifying surrogate markers of immunity from PBMCs. Frontiers in Immunology, 13 962220, 1-12. doi: 10.3389/fimmu.2022.962220 |
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2022 Journal Article CD161 expression defines new human γδ T cell subsetsKarunathilaka, Amali, Halstrom, Samuel, Price, Patricia, Holt, Michael, Lutzky, Viviana P., Doolan, Denise L., Kupz, Andreas, Bell, Scott C., Thomson, Rachel M., Miles, John J. and Ratnatunga, Champa N. (2022). CD161 expression defines new human γδ T cell subsets. Immunity and Ageing, 19 (1) 11, 1-8. doi: 10.1186/s12979-022-00269-w |
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2022 Journal Article Proteomic identification of the contents of small extracellular vesicles from in vivo Plasmodium yoelii infectionDe Sousa, Karina P., Potriquet, Jeremy, Mulvenna, Jason, Sotillo, Javier, Groves, Penny L., Loukas, Alex, Apte, Simon H. and Doolan, Denise L. (2022). Proteomic identification of the contents of small extracellular vesicles from in vivo Plasmodium yoelii infection. International Journal for Parasitology, 52 (1), 35-45. doi: 10.1016/j.ijpara.2021.06.001 |
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2022 Journal Article Identifying Epstein-Barr virus peptide sequences associated with differential IgG antibody responseCoghill, Anna E., Fang, Jianwen, Liu, Zhiwei, Chen, Chien-Jen, Jarrett, Ruth F., Hjalgrim, Henrik, Proietti, Carla, Yu, Kelly J., Hsu, Wan-Lun, Lou, Pei-Jen, Wang, Chen-Ping, Zhao, Yingdong, Doolan, Denise L. and Hildesheim, Allan (2022). Identifying Epstein-Barr virus peptide sequences associated with differential IgG antibody response. International Journal of Infectious Diseases, 114, 65-71. doi: 10.1016/j.ijid.2021.10.054 |
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2022 Journal Article Meet the fellows: Everything about ISVDoolan, Denise, Lu, Shan, Ross, Ted and Cox, Manon (2022). Meet the fellows: Everything about ISV. Human Vaccines and Immunotherapeutics, 18 (4) 2096964. doi: 10.1080/21645515.2022.2096964 |
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2021 Journal Article Malaria research in Australia: looking through the lens of the past towards the futureDoolan, Denise L. (2021). Malaria research in Australia: looking through the lens of the past towards the future. International Journal for Parasitology, 51 (13-14), 1255-1263. doi: 10.1016/j.ijpara.2021.11.005 |
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2021 Journal Article Characterization of the humoral immune response to the EBV proteome in extranodal NK/T-cell lymphomaLiu, Zhiwei, Sarathkumara, Yomani D., Chan, John K. C., Kwong, Yok-Lam, Lam, Tai Hing, Ip, Dennis Kai Ming, Chiu, Brian C. -H., Xu, Jun, Su, Yu-Chieh, Proietti, Carla, Cooper, Martha M., Yu, Kelly J., Bassig, Bryan, Liang, Raymond, Hu, Wei, Ji, Bu-Tian, Coghill, Anna E., Pfeiffer, Ruth M., Hildesheim, Allan, Rothman, Nathaniel, Doolan, Denise L. and Lan, Qing (2021). Characterization of the humoral immune response to the EBV proteome in extranodal NK/T-cell lymphoma. Scientific Reports, 11 (1) 23664, 1-8. doi: 10.1038/s41598-021-02788-w |
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2021 Journal Article Systems serology detects functionally distinct coronavirus antibody features in children and elderlySelva, Kevin J., van de Sandt, Carolien E., Lemke, Melissa M., Lee, Christina Y., Shoffner, Suzanne K., Chua, Brendon Y., Davis, Samantha K., Nguyen, Thi H. O., Rowntree, Louise C., Hensen, Luca, Koutsakos, Marios, Wong, Chinn Yi, Mordant, Francesca, Jackson, David C., Flanagan, Katie L., Crowe, Jane, Tosif, Shidan, Neeland, Melanie R., Sutton, Philip, Licciardi, Paul V., Crawford, Nigel W., Cheng, Allen C., Doolan, Denise L., Amanat, Fatima, Krammer, Florian, Chappell, Keith, Modhiran, Naphak, Watterson, Daniel, Young, Paul ... Chung, Amy W. (2021). Systems serology detects functionally distinct coronavirus antibody features in children and elderly. Nature Communications, 12 (1) 2037, 2037. doi: 10.1038/s41467-021-22236-7 |
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2021 Journal Article A point-of-care lateral flow assay for neutralising antibodies against SARS-CoV-2Fulford, Thomas S., Van, Huy, Gherardin, Nicholas A., Zheng, Shuning, Ciula, Marcin, Drummer, Heidi E., Redmond, Samuel, Tan, Hyon-Xhi, Boo, Irene, Center, Rob J., Li, Fan, Grimley, Samantha L., Wines, Bruce D., Nguyen, Thi H. O., Mordant, Francesca L., Ellenberg, Paula, Rowntree, Louise C., Kedzierski, Lukasz, Cheng, Allen C., Doolan, Denise L., Matthews, Gail, Bond, Katherine, Hogarth, P. Mark, McQuilten, Zoe, Subbarao, Kanta, Kedzierska, Katherine, Juno, Jennifer A., Wheatley, Adam K., Kent, Stephen J. ... Godfrey, Dale (2021). A point-of-care lateral flow assay for neutralising antibodies against SARS-CoV-2. EBioMedicine, 74 103729, 1-16. doi: 10.1016/j.ebiom.2021.103729 |
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2021 Journal Article Coronavirus Disease (COVID-19): Pathophysiology, epidemiology, clinical management and public health responseDoolan, Denise L., Kozlakidis, Zisis, Zhang, Zhongheng, Paessler, Slobodan, Su, Longxiang, Yokota, Yasuko Tsunetsugu, Shioda, Tatsuo, Rodriguez-Palacios, Alexander, Kaynar, Ata Murat, Ahmed, Rukhsana, Samy, Abdallah, Bradby, Hannah, Kalergis, Alexis M., Dutta, Mohan Jyoti, Kogut, Michael and Zhang, Shen-Ying (2021). Coronavirus Disease (COVID-19): Pathophysiology, epidemiology, clinical management and public health response. Frontiers in Public Health, 9 807159, 1-2. doi: 10.3389/fpubh.2021.807159 |
