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2014

Journal Article

Microscopic diffusion properties of fixed breast tissue: Preliminary findings

Norddin, Narina, Power, Carl, Watson, Geoffrey, Cowin, Gary, Kurniawan, Nyoman D., Gluch, Laurence and Bourne, Roger M. (2014). Microscopic diffusion properties of fixed breast tissue: Preliminary findings. Magnetic Resonance in Medicine, 74 (6), 1733-1739. doi: 10.1002/mrm.25555

Microscopic diffusion properties of fixed breast tissue: Preliminary findings

2014

Conference Publication

A segmentation guide and probabilistic atlas of the C57BL/6J mouse brain from magnetic resonance imaging

Ullmann, Jeremy , Watson, Charles , Janke, Andrew , Keller, Marianne, Kurniawan, Nyoman , Yang, Zhengyi , Richards, Kay, Paxinos, George, Egan, Gary, Petrou, Steven, Bartlett, Perry, Galloway, Graham and Reutens, David (2014). A segmentation guide and probabilistic atlas of the C57BL/6J mouse brain from magnetic resonance imaging. 5th INCF Congress of Neuroinformatics, Munich, Germany, 10-12 September 2012. Lausanne, Switzerland: Frontiers Research Foundation. doi: 10.3389/conf.fninf.2014.08.00035

A segmentation guide and probabilistic atlas of the C57BL/6J mouse brain from magnetic resonance imaging

2014

Journal Article

Current developments in MRI for assessing rodent models of multiple sclerosis

Alomair, Othman I., Smith, Maree T., Brereton, Ian M., Galloway, Graham J. and Kurniawan, Nyoman D. (2014). Current developments in MRI for assessing rodent models of multiple sclerosis. Future Neurology, 9 (4), 487-511. doi: 10.2217/FNL.14.33

Current developments in MRI for assessing rodent models of multiple sclerosis

2014

Journal Article

Visualization of mouse barrel cortex using ex-vivo track density imaging

Kurniawan, Nyoman D., Richards, Kay L., Yang, Zhengyi, She, David, Ullmann, Jeremy F. P., Moldrich, Randal X., Liu, Sha, Yaksic, Javier Urriola, Leanage, Gayeshika, Kharatishvilia, Irina, Wimmer, Verena, Calamante, Fernando, Galloway, Graham J., Petrou, Steven and Reutens, David C. (2014). Visualization of mouse barrel cortex using ex-vivo track density imaging. NeuroImage, 87, 465-475. doi: 10.1016/j.neuroimage.2013.09.030

Visualization of mouse barrel cortex using ex-vivo track density imaging

2014

Conference Publication

Distinctive Water Diffusion Properties of Epithelia May Be the Key to Better Cancer Imaging Techniques

Bourne, Roger, Power, Carl, Chatterjee, Aritrick, Cowin, Gary, Kurniawan, Nyoman and Watson, Geoffrey (2014). Distinctive Water Diffusion Properties of Epithelia May Be the Key to Better Cancer Imaging Techniques. Sydney Cancer Conference 2014, University of Sydney, NSW Australia, 26 November 2014. Chichester, West Sussex, United Kingdom: Wiley-Blackwell Publishing. doi: 10.1111/ajco.12282

Distinctive Water Diffusion Properties of Epithelia May Be the Key to Better Cancer Imaging Techniques

2014

Journal Article

Mapping somatosensory connectivity in adult mice using diffusion MRI tractography and super-resolution track density imaging

Richards, Kay, Calamante, Fernando, Tournier, Jacques-Donald, Kurniawan, Nyoman D., Sadeghian, Farnoosh, Retchford, Alexander R., Jones, Gabriel Davis, Reid, Christopher A., Reutens, David C., Ordidge, Roger, Connelly, Alan and Petrou, Steven (2014). Mapping somatosensory connectivity in adult mice using diffusion MRI tractography and super-resolution track density imaging. Neuroimage, 102 (2), 381-392. doi: 10.1016/j.neuroimage.2014.07.048

Mapping somatosensory connectivity in adult mice using diffusion MRI tractography and super-resolution track density imaging

2013

Journal Article

X-linked microtubule-associated protein, Mid1, regulates axon development

Lu, Tingjia, Chen, Renchao, Cox, Timothy C., Moldrich, Randal X., Kurniawan, Nyoman, Tan, Guohe, Perry, Jo K., Ashworth, Alan, Bartlett, Perry F., Xu, Li, Zhang, Jing, Lu, Bin, Wu, Mingyue, Shen, Qi, Liu, Yuanyuan, Richards, Linda J. and Xiong, Zhiqi (2013). X-linked microtubule-associated protein, Mid1, regulates axon development. Proceedings of the National Academy of Sciences of the United States of America, 110 (47), 19131-19136. doi: 10.1073/pnas.1303687110

X-linked microtubule-associated protein, Mid1, regulates axon development

2013

Journal Article

Longitudinal assessment of white matter pathology in the injured mouse spinal cord through ultra-high field (16.4T) in vivo diffusion tensor imaging

Brennan, Faith H., Cowin, Gary J., Kurniawan, Nyoman D. and Ruitenberg, Marc J. (2013). Longitudinal assessment of white matter pathology in the injured mouse spinal cord through ultra-high field (16.4T) in vivo diffusion tensor imaging. NeuroImage, 82, 574-585. doi: 10.1016/j.neuroimage.2013.06.019

Longitudinal assessment of white matter pathology in the injured mouse spinal cord through ultra-high field (16.4T) in vivo diffusion tensor imaging

2013

Journal Article

Enhanced characterization of the zebrafish brain as revealed by super-resolution track-density imaging

Ullmann, Jeremy F. P., Calamante, Fernando, Collin, Shaun P., Reutens, David C. and Kurniawan, Nyoman D. (2013). Enhanced characterization of the zebrafish brain as revealed by super-resolution track-density imaging. Brain Structure and Function, 220 (1), 457-468. doi: 10.1007/s00429-013-0667-7

Enhanced characterization of the zebrafish brain as revealed by super-resolution track-density imaging

2013

Journal Article

A segmentation protocol and MRI atlas of the C57BL/6J mouse neocortex

Ullmann, Jeremy F. P., Watson, Charles, Janke, Andrew L., Kurniawan, Nyoman D. and Reutens, David C. (2013). A segmentation protocol and MRI atlas of the C57BL/6J mouse neocortex. NeuroImage, 78, 196-203. doi: 10.1016/j.neuroimage.2013.04.008

A segmentation protocol and MRI atlas of the C57BL/6J mouse neocortex

2013

Journal Article

Heterozygosity for Nuclear Factor One X Affects Hippocampal-Dependent Behaviour in Mice

Harris, Lachlan, Dixon, Chantelle, Cato, Kathleen, Heng, Yee Hsieh Evelyn, Kurniawan, Nyoman D., Ullmann, Jeremy F. P., Janke, Andrew L., Gronostajski, Richard M., Richards, Linda J., Burne, Thomas H. J. and Piper, Michael (2013). Heterozygosity for Nuclear Factor One X Affects Hippocampal-Dependent Behaviour in Mice. PLoS ONE, 8 (6) e65478, e65478. doi: 10.1371/journal.pone.0065478

Heterozygosity for Nuclear Factor One X Affects Hippocampal-Dependent Behaviour in Mice

2013

Journal Article

An MRI atlas of the mouse basal ganglia

Ullmann, Jeremy F. P., Watson, Charles, Janke, Andrew L., Kurniawan, Nyoman D., Paxinos, George and Reutens, David C. (2013). An MRI atlas of the mouse basal ganglia. Brain Structure and Function, 219 (4), 1343-1353. doi: 10.1007/s00429-013-0572-0

An MRI atlas of the mouse basal ganglia

2013

Journal Article

Acute delivery of EphA4-Fc improves functional recovery after contusive spinal cord injury in rats

Spanevello, Mark Damien, Tajouri, Sophie Ines, Mirciov, Cornel, Kurniawan, Nyoman, Pearse, Martin John, Fabri, Louis Jerry, Owczarek, Catherine Mary, Hardy, Matthew Philip, Bradford, Rebecca Anne, Ramunno, Melanie Louise, Turnley, Ann Maree, Ruitenberg, Marc Jan, Boyd, Andrew Wallace and Bartlett, Perry Francis (2013). Acute delivery of EphA4-Fc improves functional recovery after contusive spinal cord injury in rats. Journal of Neurotrauma, 30 (12), 1023-1034. doi: 10.1089/neu.2012.2729

Acute delivery of EphA4-Fc improves functional recovery after contusive spinal cord injury in rats

2013

Journal Article

Non-invasive monitoring of sucrose mobilization from culm storage parenchyma by magnetic resonance spectroscopy

O'Neill, Brian P., Purnell, Matthew P., Kurniawan, Nyoman D., Cowin, Gary J., Galloway, Graham J., Nielsen, Lars K. and Brumbley, Stevens M. (2013). Non-invasive monitoring of sucrose mobilization from culm storage parenchyma by magnetic resonance spectroscopy. Bioscience, Biotechnology, and Biochemistry, 77 (3), 487-496. doi: 10.1271/bbb.120682

Non-invasive monitoring of sucrose mobilization from culm storage parenchyma by magnetic resonance spectroscopy

2013

Journal Article

Hippocampal volume and cell density changes in a mouse model of human genetic epilepsy

Richards, Kay L., Kurniawan, Nyoman D., Yang, Zhengyi, Kim, Tae Hwan, Keller, Marianne D., Low, Jun, Ullmann, Jeremy F. P., Cole, Stacey, Foong, Samuel, Galloway, Graham J., Reid, Christopher A., Paxinos, George, Reutens, David C. and Petrou, Steven (2013). Hippocampal volume and cell density changes in a mouse model of human genetic epilepsy. Neurology, 80 (13), 1240-1246. doi: 10.1212/WNL.0b013e31828970ec

Hippocampal volume and cell density changes in a mouse model of human genetic epilepsy

2013

Journal Article

A proteomics and transcriptomics investigation of the venom from the Barychelid spider Trittame loki (brush-foot trapdoor)

Undheim, Eivind A. B., Sunagar, Kartik, Herzig, Volker, Kely, Laurence, Low, Dolyce H. W., Jackson, Timothy N. W., Jones, Alun, Kurniawan, Nyoman, King, Glenn F., Ali, Syed A., Antunes, Agostino, Ruder, Tim and Fry, Bryan G. (2013). A proteomics and transcriptomics investigation of the venom from the Barychelid spider Trittame loki (brush-foot trapdoor). Toxins, 5 (12), 2488-2503. doi: 10.3390/toxins5122488

A proteomics and transcriptomics investigation of the venom from the Barychelid spider Trittame loki (brush-foot trapdoor)

2013

Journal Article

Detection of endogenous iron deposits in the injured mouse spinal cord through high-resolution ex vivo and in vivo MRI

Blomster, Linda V., Cowin, Gary J., Kurniawan, Nyoman D. and Ruitenberg, Marc J. (2013). Detection of endogenous iron deposits in the injured mouse spinal cord through high-resolution ex vivo and in vivo MRI. NMR in Biomedicine, 26 (2), 141-150. doi: 10.1002/nbm.2829

Detection of endogenous iron deposits in the injured mouse spinal cord through high-resolution ex vivo and in vivo MRI

2013

Other Outputs

Average wild-type C57BL/6J mouse 3D MRI hippocampus labels

Janke, Andrew, Kurniawan, Nyoman D., Ullmann, Jeremy F., Reutens, David, Galloway, Graham J. and Watson, Charles (2013). Average wild-type C57BL/6J mouse 3D MRI hippocampus labels. The University of Queensland. (Dataset) doi: 10.14264/uql.2015.868

Average wild-type C57BL/6J mouse 3D MRI hippocampus labels

2012

Journal Article

MRI-guided volume reconstruction of mouse brain from histological sections

Yang, Zhengyi, Richards, Kay, Kurniawan, Nyoman D., Petrou, Steven and Reutens, David C. (2012). MRI-guided volume reconstruction of mouse brain from histological sections. Journal of Neuroscience Methods, 211 (2), 2010-2017. doi: 10.1016/j.jneumeth.2012.08.021

MRI-guided volume reconstruction of mouse brain from histological sections

2012

Journal Article

Diffusion-weighted magnetic resonance imaging detection of basal forebrain cholinergic degeneration in a mouse model

Kerbler, Georg M., Hamlin, Adam S., Pannek, Kerstin, Kurniawan, Nyoman D., Keller, Marianne D., Rose, Stephen E. and Coulson, Elizabeth J. (2012). Diffusion-weighted magnetic resonance imaging detection of basal forebrain cholinergic degeneration in a mouse model. NeuroImage, 66, 133-141. doi: 10.1016/j.neuroimage.2012.10.075

Diffusion-weighted magnetic resonance imaging detection of basal forebrain cholinergic degeneration in a mouse model