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2024 Journal Article Isolation of a Methanobrevibacter gottschalkii strain from an Eastern Gray KangarooVolmer, James G., Evans, Paul N., Soo, Rochelle M., Hugenholtz, Philip, Tyson, Gene W. and Morrison, Mark (2024). Isolation of a Methanobrevibacter gottschalkii strain from an Eastern Gray Kangaroo. Frontiers in Microbiology, 15 1483533, 1-11. doi: 10.3389/fmicb.2024.1483533 |
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2024 Journal Article Exploring the Origins and Evolution of Oxygenic and Anoxygenic Photosynthesis in Deeply Branched <i>Cyanobacteriota</i>Tan, Sha, Liu, Lan, Jiao, Jian-Yu, Li, Meng-Meng, Hu, Chao-Jian, Lv, Ai-Ping, Qi, Yan-Ling, Li, Yu-Xian, Rao, Yang-Zhi, Qu, Yan-Ni, Jiang, Hong-Chen, Soo, Rochelle M, Evans, Paul N, Hua, Zheng-Shuang and Li, Wen-Jun (2024). Exploring the Origins and Evolution of Oxygenic and Anoxygenic Photosynthesis in Deeply Branched Cyanobacteriota. Molecular Biology and Evolution, 41 (8) msae151. doi: 10.1093/molbev/msae151 |
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2024 Journal Article Nitrate-dependent anaerobic methane oxidation coupled to Fe(III) reduction as a source of ammonium and nitrous oxideTan, Xin, Lu, Yang, Nie, Wen-Bo, Evans, Paul, Wang, Xiao-Wei, Dang, Cheng-Cheng, Wang, Xuan, Liu, Bing-Feng, Xing, De-Feng, Ren, Nan-Qi and Xie, Guo-Jun (2024). Nitrate-dependent anaerobic methane oxidation coupled to Fe(III) reduction as a source of ammonium and nitrous oxide. Water Research, 256 121571, 1-11. doi: 10.1016/j.watres.2024.121571 |
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2024 Journal Article Kinetic, electrochemical and spectral characterization of bacterial and archaeal rusticyanins; unexpected stability issues and consequences for applications in biotechnologyWilson, Liam A., Melville, Jamie N., Pedroso, Marcelo M., Krco, Stefan, Hoelzl, Robert, Zaugg, Julian, Southam, Gordon, Virdis, Bernardino, Evans, Paul, Supper, Jenna, Harmer, Jeffrey R., Tyson, Gene, Clark, Alice, Schenk, Gerhard and Bernhardt, Paul V. (2024). Kinetic, electrochemical and spectral characterization of bacterial and archaeal rusticyanins; unexpected stability issues and consequences for applications in biotechnology. Journal of Inorganic Biochemistry, 256 112539, 1-10. doi: 10.1016/j.jinorgbio.2024.112539 |
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2024 Journal Article Temperature, pH, and oxygen availability contributed to the functional differentiation of ancient NitrososphaeriaLuo, Zhen-Hao, Li, Qi, Xie, Yuan-Guo, Lv, Ai-Ping, Qi, Yan-Ling, Li, Meng-Meng, Qu, Yan-Ni, Liu, Ze-Tao, Li, Yu-Xian, Rao, Yang-Zhi, Jiao, Jian-Yu, Liu, Lan, Rao, Manik Prabhu Narsing, Hedlund, Brian P., Evans, Paul N., Fang, Yuan, Shu, Wen-Sheng, Huang, Li-Nan, Li, Wen-Jun and Hua, Zheng-Shuang (2024). Temperature, pH, and oxygen availability contributed to the functional differentiation of ancient Nitrososphaeria. The ISME Journal, 18 (1) wrad031. doi: 10.1093/ismejo/wrad031 |
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2023 Journal Article Evidence for nitrous oxide emissions by nitrite-dependent anaerobic methane oxidizing bacteriaTan, Xin, Lu, Yang, Nie, Wen-Bo, Xie, Guo-Jun, Evans, Paul, Wang, Xiao-Wei, Dang, Cheng-Cheng, Zhao, Zhi-Cheng, Fan, Sheng-Qiang and Ren, Nanqi (2023). Evidence for nitrous oxide emissions by nitrite-dependent anaerobic methane oxidizing bacteria. Environmental Science and Technology, 57 (44), 16862-16872. doi: 10.1021/acs.est.3c02805 |
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2023 Journal Article Anthropedogenesis in coal mine overburden; the need for a comprehensive, fundamental biogeochemical approachGunathunga, Samadhi U., Gagen, Emma J., Evans, Paul N., Erskine, Peter D. and Southam, Gordon (2023). Anthropedogenesis in coal mine overburden; the need for a comprehensive, fundamental biogeochemical approach. Science of The Total Environment, 892 164515, 1-17. doi: 10.1016/j.scitotenv.2023.164515 |
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2023 Journal Article Evidence for nontraditional mcr -containing archaea contributing to biological methanogenesis in geothermal springsWang, Jiajia, Qu, Yan-Ni, Evans, Paul N., Guo, Qinghai, Zhou, Fengwu, Nie, Ming, Jin, Qusheng, Zhang, Yan, Zhai, Xiangmei, Zhou, Ming, Yu, Zhiguo, Fu, Qing-Long, Xie, Yuan-Guo, Hedlund, Brian P., Li, Wen-Jun, Hua, Zheng-Shuang, Wang, Zimeng and Wang, Yanxin (2023). Evidence for nontraditional mcr -containing archaea contributing to biological methanogenesis in geothermal springs. Science Advances, 9 (26) adg6004, 1-15. doi: 10.1126/sciadv.adg6004 |
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2023 Journal Article Hot spring distribution and survival mechanisms of thermophilic comammox NitrospiraZhang, Yan, Liu, Tao, Li, Meng-Meng, Hua, Zheng-Shuang, Evans, Paul, Qu, Yanni, Tan, Sha, Zheng, Min, Lu, Hui, Jiao, Jian-Yu, Lücker, Sebastian, Daims, Holger, Li, Wen-Jun and Guo, Jianhua (2023). Hot spring distribution and survival mechanisms of thermophilic comammox Nitrospira. The ISME Journal, 17 (7), 993-1003. doi: 10.1038/s41396-023-01409-w |
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2023 Journal Article Panguiarchaeum symbiosum, a potential hyperthermophilic symbiont in the TACK superphylumQu, Yan-Ni, Rao, Yang-Zhi, Qi, Yan-Ling, Li, Yu-Xian, Li, Andrew, Palmer, Marike, Hedlund, Brian P., Shu, Wen-Sheng, Evans, Paul N., Nie, Guo-Xing, Hua, Zheng-Shuang and Li, Wen-Jun (2023). Panguiarchaeum symbiosum, a potential hyperthermophilic symbiont in the TACK superphylum. Cell Reports, 42 (3) 112158, 1-21. doi: 10.1016/j.celrep.2023.112158 |
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2023 Journal Article Isolation and characterisation of novel Methanocorpusculum species indicates the genus is ancestrally host-associatedVolmer, James G., Soo, Rochelle M., Evans, Paul N., Hoedt, Emily C., Astorga Alsina, Ana L., Woodcroft, Benjamin J., Tyson, Gene W., Hugenholtz, Philip and Morrison, Mark (2023). Isolation and characterisation of novel Methanocorpusculum species indicates the genus is ancestrally host-associated. BMC Biology, 21 (1) 59, 1-17. doi: 10.1186/s12915-023-01524-2 |
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2022 Journal Article Correction: Recoding of stop codons expands the metabolic potential of two novel AsgardarchaeotaSun, Jiarui, Evans, Paul N., Gagen, Emma J., Woodcroft, Ben J., Hedlund, Brian P., Woyke, Tanja, Hugenholtz, Philip and Rinke, Christian (2022). Correction: Recoding of stop codons expands the metabolic potential of two novel Asgardarchaeota. ISME Communications, 2 (1) 6, 6. doi: 10.1038/s43705-021-00048-6 |
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2021 Journal Article Comparative genomics reveals thermal adaptation and a high metabolic diversity in "Candidatus Bathyarchaeia"Qi, Yan-Ling, Evans, Paul N., Li, Yu-Xian, Rao, Yang-Zhi, Qu, Yan-Ni, Tan, Sha, Jiao, Jian-Yu, Chen, Ya-Ting, Hedlund, Brian P., Shu, Wen-Sheng, Hua, Zheng-Shuang and Li, Wen-Jun (2021). Comparative genomics reveals thermal adaptation and a high metabolic diversity in "Candidatus Bathyarchaeia". mSystems, 6 (4) e00252-21. doi: 10.1128/mSystems.00252-21 |
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2021 Journal Article Recoding of stop codons expands the metabolic potential of two novel Asgardarchaeota lineagesSun, Jiarui, Evans, Paul N., Gagen, Emma J., Woodcroft, Ben J., Hedlund, Brian P., Woyke, Tanja, Hugenholtz, Philip and Rinke, Christian (2021). Recoding of stop codons expands the metabolic potential of two novel Asgardarchaeota lineages. ISME Communications, 1 (1) 30, 1-14. doi: 10.1038/s43705-021-00032-0 |
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2021 Journal Article Evidence for non-methanogenic metabolisms in globally distributed archaeal clades basal to the MethanomassiliicoccalesZinke, Laura A., Evans, Paul N., Santos-Medellín, Christian, Schroeder, Alena L., Parks, Donovan H., Varner, Ruth K., Rich, Virginia I., Tyson, Gene W. and Emerson, Joanne B. (2021). Evidence for non-methanogenic metabolisms in globally distributed archaeal clades basal to the Methanomassiliicoccales. Environmental Microbiology, 23 (1), 340-357. doi: 10.1111/1462-2920.15316 |
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2020 Journal Article Integration of absolute multi-omics reveals dynamic protein-to-RNA ratios and metabolic interplay within mixed-domain microbiomesDelogu, F., Kunath, B. J., Evans, P. N., Arntzen, M., Hvidsten, T. R. and Pope, P. B. (2020). Integration of absolute multi-omics reveals dynamic protein-to-RNA ratios and metabolic interplay within mixed-domain microbiomes. Nature Communications, 11 (1) 4708, 4708. doi: 10.1038/s41467-020-18543-0 |
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2020 Journal Article The IsoGenie database: an interdisciplinary data management solution for ecosystems biology and environmental researchBolduc, Benjamin, Hodgkins, Suzanne B., Varner, Ruth K., Crill, Patrick M., McCalley, Carmody K., Chanton, Jeffrey P., Tyson, Gene W., Riley, William J., Palace, Michael, Duhaime, Melissa B., Hough, Moira A., Saleska, Scott R., Sullivan, Matthew B., Rich, Virginia I., IsoGenie Project Coordinators, IsoGenie Project Team, A2A Project Team, Hoelzle, Robert and Evans, Paul (2020). The IsoGenie database: an interdisciplinary data management solution for ecosystems biology and environmental research. PeerJ, 8 e9467, e9467. doi: 10.7717/peerj.9467 |
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2019 Journal Article The effect of methane and odd-chain fatty acids on 3-hydroxybutyrate (3HB) and 3-hydroxyvalerate (3HV) synthesis by a Methylosinus-dominated mixed cultureLuangthongkam, Pawarisa, Strong, Peter James, Syed Mahamud, Syarifah Nuraqmar, Evans, Paul, Jensen, Paul, Tyson, Gene, Laycock, Bronwyn, Lant, Paul Andrew and Pratt, Steven (2019). The effect of methane and odd-chain fatty acids on 3-hydroxybutyrate (3HB) and 3-hydroxyvalerate (3HV) synthesis by a Methylosinus-dominated mixed culture. Bioresources and Bioprocessing, 6 (1) 50. doi: 10.1186/s40643-019-0285-1 |
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2019 Journal Article Thermophilic production of poly(3-hydroxybutyrate-co-3-hydrovalerate) by a mixed methane-utilizing cultureLuangthongkam, Pawarisa, Laycock, Bronwyn, Evans, Paul, Lant, Paul and Pratt, Steven (2019). Thermophilic production of poly(3-hydroxybutyrate-co-3-hydrovalerate) by a mixed methane-utilizing culture. New Biotechnology, 53, 49-56. doi: 10.1016/j.nbt.2019.06.008 |
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2019 Journal Article Insights into the ecological roles and evolution of methyl-coenzyme M reductase-containing hot spring ArchaeaHua, Zheng-Shuang, Wang, Yu-Lin, Evans, Paul N., Qu, Yan-Ni, Goh, Kian Mau, Rao, Yang-Zhi, Qi, Yan-Ling, Li, Yu-Xian, Huang, Min-Jun, Jiao, Jian-Yu, Chen, Ya-Ting, Mao, Yan-Ping, Shu, Wen-Sheng, Hozzein, Wael, Hedlund, Brian P., Tyson, Gene W., Zhang, Tong and Li, Wen-Jun (2019). Insights into the ecological roles and evolution of methyl-coenzyme M reductase-containing hot spring Archaea. Nature Communications, 10 (1) 4574, 4574. doi: 10.1038/s41467-019-12574-y |
