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2024

Conference Publication

An unsupervised deep learning-based method for in vivo high resolution Kidney MRI motion correction

Moinian, Shahrzad, Kurniawan, Nyoman, Chandra, Shekhar, Vegh, Viktor and Reutens, David (2024). An unsupervised deep learning-based method for in vivo high resolution Kidney MRI motion correction. 2023 ISMRM & ISMRT Annual Meeting & Exhibition, Toronto, ON, Canada, 3-8 June 2023. Berkeley, CA, United States: International Society for Magnetic Resonance in Medicine. doi: 10.58530/2023/4915

An unsupervised deep learning-based method for in vivo high resolution Kidney MRI motion correction

2024

Journal Article

AliasNet: Alias artefact suppression network for accelerated phase-encode MRI

Bran Lorenzana, Marlon, Chandra, Shekhar S. and Liu, Feng (2024). AliasNet: Alias artefact suppression network for accelerated phase-encode MRI. Magnetic Resonance Imaging, 105, 17-28. doi: 10.1016/j.mri.2023.10.001

AliasNet: Alias artefact suppression network for accelerated phase-encode MRI

2024

Journal Article

Multi-modal traumatic brain injury prognosis via structure-aware field-wise learning

Zhang, Lu, Li, Zhibin, Chandra, Shekhar S. and Nasrallah, Fatima (2024). Multi-modal traumatic brain injury prognosis via structure-aware field-wise learning. IEEE Transactions on Knowledge and Data Engineering, 36 (8), 1-12. doi: 10.1109/tkde.2024.3364385

Multi-modal traumatic brain injury prognosis via structure-aware field-wise learning

2023

Journal Article

Efficient block contrastive learning via parameter-free meta-node approximation

Kulatilleke, Gayan K., Portmann, Marius and Chandra, Shekhar S. (2023). Efficient block contrastive learning via parameter-free meta-node approximation. Neurocomputing, 561 126850, 126850. doi: 10.1016/j.neucom.2023.126850

Efficient block contrastive learning via parameter-free meta-node approximation

2023

Conference Publication

Suspicious naevi classification using auxiliary classifier generative adversarial network

Zegair, Fatima Al, Rutjes, Chantal, Betz-Stablein, Brigid, Ge, Zongyuan, Soyer, H. Peter and Chandra, Shekhar S. (2023). Suspicious naevi classification using auxiliary classifier generative adversarial network. 2023 International Conference on Digital Image Computing: Techniques and Applications (DICTA), Port Macquarie, NSW, Australia, 28 November - 1 December 2023. Piscataway, NJ, United States: IEEE. doi: 10.1109/dicta60407.2023.00041

Suspicious naevi classification using auxiliary classifier generative adversarial network

2023

Conference Publication

Manipulating medical image translation with manifold disentanglement

Liu, Siyu, Dowling, Jason A., Engstrom, Craig, Greer, Peter B., Crozier, Stuart and Chandra, Shekhar S. (2023). Manipulating medical image translation with manifold disentanglement. 2023 International Conference on Digital Image Computing: Techniques and Applications (DICTA), Port Macquarie, Australia, 28 November-1 December 2023. Piscataway, NJ, United States: Institute of Electrical and Electronics Engineers. doi: 10.1109/dicta60407.2023.00053

Manipulating medical image translation with manifold disentanglement

2023

Journal Article

Non-separable two-dimensional Hadamard transform via a discrete Hadamard slice theorem

Lorenzana, Marlon Bran and Chandra, Shekhar S. (2023). Non-separable two-dimensional Hadamard transform via a discrete Hadamard slice theorem. IEEE Signal Processing Letters, 30 (99), 1237-1241. doi: 10.1109/lsp.2023.3311349

Non-separable two-dimensional Hadamard transform via a discrete Hadamard slice theorem

2023

Conference Publication

Medical shape pattern analysis with MeshCNN

Leung, Sze-Nung, Dowling, Jason A., Fripp, Jurgen, Shen, Kai-Kai and Chandra, Shekhar S. (2023). Medical shape pattern analysis with MeshCNN. 20th IEEE International Symposium on Biomedical Imaging (ISBI), Cartagena, Colombia, 18-21 April 2023. Piscataway, NJ United States: Institute of Electrical and Electronics Engineers. doi: 10.1109/isbi53787.2023.10230427

Medical shape pattern analysis with MeshCNN

2023

Conference Publication

TriFormer: A multi-modal transformer framework for mild cognitive impairment conversion prediction

Liu, Linfeng, Lyu, Junyan, Liu, Siyu, Tang, Xiaoying, Chandra, Shekhar S. and Nasrallah, Fatima A. (2023). TriFormer: A multi-modal transformer framework for mild cognitive impairment conversion prediction. 20th IEEE International Symposium on Biomedical Imaging (ISBI), Cartagena, Colombia, 18-21 April 2023. Piscataway, NJ United States: Institute of Electrical and Electronics Engineers. doi: 10.1109/isbi53787.2023.10230709

TriFormer: A multi-modal transformer framework for mild cognitive impairment conversion prediction

2023

Journal Article

An unsupervised deep learning-based image translation method for retrospective motion correction of high resolution kidney MRI

Moinian, Shahrzad, Kurniawan, Nyoman D., Chandra, Shekhar S., Vegh, Viktor and Reutens, David C. (2023). An unsupervised deep learning-based image translation method for retrospective motion correction of high resolution kidney MRI. Intelligence-Based Medicine, 8 100108, 1-15. doi: 10.1016/j.ibmed.2023.100108

An unsupervised deep learning-based image translation method for retrospective motion correction of high resolution kidney MRI

2023

Journal Article

Cascaded multi-modal mixing transformers for Alzheimer’s disease classification with incomplete data

Liu, Linfeng, Liu, Siyu, Zhang, Lu, To, Xuan Vinh, Nasrallah, Fatima and Chandra, Shekhar S. (2023). Cascaded multi-modal mixing transformers for Alzheimer’s disease classification with incomplete data. NeuroImage, 277 120267, 120267. doi: 10.1016/j.neuroimage.2023.120267

Cascaded multi-modal mixing transformers for Alzheimer’s disease classification with incomplete data

2023

Conference Publication

Towards trustable skin cancer diagnosis via rewriting model's decision

Yan, Siyuan, Yu, Zhen, Zhang, Xuelin, Mahapatra, Dwarikanath, Chandra, Shekhar S., Janda, Monika, Soyer, Peter and Ge, Zongyuan (2023). Towards trustable skin cancer diagnosis via rewriting model's decision. 2023 IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR), Vancouver, BC, Canada, 17-24 June 2023. Piscataway, NJ, United States: IEEE. doi: 10.1109/cvpr52729.2023.01113

Towards trustable skin cancer diagnosis via rewriting model's decision

2023

Journal Article

PREdiction and Diagnosis using Imaging and Clinical biomarkers Trial in Traumatic Brain Injury (PREDICT-TBI) study protocol: an observational, prospective, multicentre cohort study for the prediction of outcome in moderate-to-severe TBI

Nasrallah, Fatima, Bellapart, Judith, Walsham, James, Jacobson, Esther, To, Xuan Vinh, Manzanero, Silvia, Brown, Nathan, Meyer, Jason, Stuart, Janine, Evans, Tracey, Chandra, Shekhar S., Ross, Jason, Campbell, Lewis, Senthuran, Siva, Newcombe, Virginia, McCullough, James, Fleming, Jennifer, Pollard, Clifford and Reade, Michael (2023). PREdiction and Diagnosis using Imaging and Clinical biomarkers Trial in Traumatic Brain Injury (PREDICT-TBI) study protocol: an observational, prospective, multicentre cohort study for the prediction of outcome in moderate-to-severe TBI. BMJ Open, 13 (4) e067740, 1-9. doi: 10.1136/bmjopen-2022-067740

PREdiction and Diagnosis using Imaging and Clinical biomarkers Trial in Traumatic Brain Injury (PREDICT-TBI) study protocol: an observational, prospective, multicentre cohort study for the prediction of outcome in moderate-to-severe TBI

2023

Conference Publication

Semantic segmentation of 3D medical images through a kaleidoscope: data from the Osteoarthritis Initiative

Woo, Boyeong, Bran Lorenzana, Marlon, Engstrom, Craig, Baresic, William, Fripp, Jurgen, Crozier, Stuart and Chandra, Shekhar S. (2023). Semantic segmentation of 3D medical images through a kaleidoscope: data from the Osteoarthritis Initiative. Medical Imaging with Deep Learning, Nashville, TN, United States, 10-12 July 2023. Cambridge, MA, United States: ML Research Press.

Semantic segmentation of 3D medical images through a kaleidoscope: data from the Osteoarthritis Initiative

2023

Conference Publication

Semantic segmentation of 3D medical images through a kaleidoscope: data from the Osteoarthritis Initiative

Woo, Boyeong, Bran Lorenzanal, Marlon, Engstrom, Craig, Baresic, William, Fripp, Jurgen, Crozier, Stuart and Chandra, Shekhar S. (2023). Semantic segmentation of 3D medical images through a kaleidoscope: data from the Osteoarthritis Initiative. 6th International Conference on Medical Imaging with Deep Learning (MIDL), Nashville, TN, United States, 10-12 July 2023. San Diego, CA, United States: JMLR-Journal of Machine Learning Research.

Semantic segmentation of 3D medical images through a kaleidoscope: data from the Osteoarthritis Initiative

2023

Conference Publication

Style-based manifold for weakly-supervised disease characteristic discovery

Liu, Siyu, Liu, Linfeng, Engstrom, Craig, To, Xuan Vinh, Ge, Zongyuan, Crozier, Stuart, Nasrallah, Fatima and Chandra, Shekhar S. (2023). Style-based manifold for weakly-supervised disease characteristic discovery. MICCAI 2023: 26th International Conference, Vancouver, BC, Canada, 8-12 October 2023. Heidelberg, Germany: Springer. doi: 10.1007/978-3-031-43904-9_36

Style-based manifold for weakly-supervised disease characteristic discovery

2022

Other Outputs

Osteoarthritis Initiative (OAI) - UQ

Woo, Boyeong , Chandra, Shekhar S. , Engstrom, Craig and Crozier, Stuart (2022). Osteoarthritis Initiative (OAI) - UQ. The University of Queensland. (Dataset) doi: 10.48610/d8e13fb

Osteoarthritis Initiative (OAI) - UQ

2022

Conference Publication

Transformer compressed sensing via global image tokens

Bran Lorenzana, Marlon, Engstrom, Craig and Chandra, Shekhar S. (2022). Transformer compressed sensing via global image tokens. 2022 IEEE International Conference on Image Processing (ICIP), Bordeaux, France, 16-19 October 2022. Piscataway, NJ, United States: IEEE. doi: 10.1109/icip46576.2022.9897630

Transformer compressed sensing via global image tokens

2022

Conference Publication

Skin lesion recognition with class-hierarchy regularized hyperbolic embeddings

Yu, Zhen, Nguyen, Toan, Gal, Yaniv, Ju, Lie, Chandra, Shekhar S., Zhang, Lei, Bonnington, Paul, Mar, Victoria, Wang, Zhiyong and Ge, Zongyuan (2022). Skin lesion recognition with class-hierarchy regularized hyperbolic embeddings. 25th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), Singapore, Singapore, 18-22 September 2022. Heidelberg, Germany: Springer. doi: 10.1007/978-3-031-16437-8_57

Skin lesion recognition with class-hierarchy regularized hyperbolic embeddings

2022

Journal Article

CAN3D: Fast 3D medical image segmentation via compact context aggregation

Dai, Wei, Woo, Boyeong, Liu, Siyu, Marques, Matthew, Engstrom, Craig, Greer, Peter B., Crozier, Stuart, Dowling, Jason A. and Chandra, Shekhar S. (2022). CAN3D: Fast 3D medical image segmentation via compact context aggregation. Medical Image Analysis, 82 102562, 1-17. doi: 10.1016/j.media.2022.102562

CAN3D: Fast 3D medical image segmentation via compact context aggregation