Overview
Background
Dr Nones research program is focused in using genomics to better understand the molecular aspects of cancer development and response to treatment. Her work encompassed a series of cancer types including oesophageal, pancreatic, breast and lung cancers. Cancer genomics is impacting patient care through precision medicine. Her work is contributing to two areas: i) our understanding of tumour development and progression by identifying new genes and/or mechanisms that drive cancer progression or response to treatment; and ii) investigating steps to improve the translation of genomics into patient care to improve outcomes for cancer patients.
Availability
- Dr Katia Nones is:
- Available for supervision
Qualifications
- Master of Science, University of São Paulo
- Doctor of Agronomy, University of São Paulo
Research interests
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Research Interests
- Genomics - Transcriptomics - DNA Methylation - Cancer
Works
Search Professor Katia Nones’s works on UQ eSpace
2013
Journal Article
Clinical and molecular characterization of HER2 amplified-pancreatic cancer
Chou, Angela, Waddell, Nicola, Cowley, Mark J., Gill, Anthony J., Chang, David K., Patch, Ann-Marie, Nones, Katia, Wu, Jianmin, Pinese, Mark, Johns, Amber L., Miller, David K., Kassahn, Karin S., Nagrial, Adnan M., Wasan, Harpreet, Goldstein, David, Toon, Christopher W., Chin, Venessa, Chantrill, Lorraine, Humphris, Jeremy, Mead, R. Scott, Rooman, Ilse, Samra, Jaswinder S., Pajic, Marina, Musgrove, Elizabeth A., Pearson, John V., Morey, Adrienne L., Grimmond, Sean M. and Biankin, Andrew V. (2013). Clinical and molecular characterization of HER2 amplified-pancreatic cancer. Genome Medicine, 5 (8) 78, 78.1-78.10. doi: 10.1186/gm482
2013
Journal Article
MicroRNA-182-5-p targets a network of genes involved in DNA repair
Krishnan, Keerthana, Steptoe, Anita L., Martin, Hilary C., Wani, Shivangi, Nones, Katia, Waddell, Nic, Mariasegaram, Mythily, Simpson, Peter T., Lakhani, Sunil R., Gabrielli, Brian, Vlassov, Alexander, Cloonan, Nicole and Grimmond, Sean M. (2013). MicroRNA-182-5-p targets a network of genes involved in DNA repair. RNA, 19 (2), 230-242. doi: 10.1261/rna.034926.112
2013
Journal Article
Association of IGF1 and KDM5A polymorphisms with performance, fatness and carcass traits in chickens
Boschiero, Clarissa, Jorge, Erika C., Ninov, Kerli, Nones, Katia, do Rosario, Millor Fernandes, Coutinho, Luiz Lehmann, Ledur, Monica Correa, Burt, David W. and Moura, Ana Silvia A. M. T. (2013). Association of IGF1 and KDM5A polymorphisms with performance, fatness and carcass traits in chickens. Journal of Applied Genetics, 54 (1), 103-112. doi: 10.1007/s13353-012-0129-6
2013
Journal Article
The long non-coding RNA Gomafu is acutely regulated in response to neuronal activation and involved in schizophrenia-associated alternative splicing
Barry, Guy, Briggs, J. A., Vanichkina, D. P., Poth, E. M., Beveridge, N. J., Vikram Ratnu, Nayler, S. P., Nones, K., Hu, J., Timothy Bredy, Nakagawa, S., Rigo, F., Taft, R. J., Cairns, M. J., Blackshaw, S., Wolvetang, E. J. and Mattick, J. S. (2013). The long non-coding RNA Gomafu is acutely regulated in response to neuronal activation and involved in schizophrenia-associated alternative splicing. Molecular Psychiatry, 19 (4), 486-494. doi: 10.1038/mp.2013.45
2012
Journal Article
Pancreatic cancer genomes reveal aberrations in axon guidance pathway genes
Biankin, Andrew V., Waddell, Nicola, Kassahn, Karin S., Gingras, Marie-Claude, Muthuswamy, Lakshmi B., Johns, Amber L., Miller, David K., Wilson, Peter J., Patch, Ann-Marie, Wu, Jianmin, Chang, David K., Cowley, Mark J., Gardiner, Brooke B., Song, Sarah, Harliwong, Ivon, Idrisoglu, Senel, Nourse, Craig, Nourbakhsh, Ehsan, Manning, Suzanne, Wani, Shivangi, Gongora, Milena, Pajic, Marina, Scarlett, Christopher J., Gill, Anthony J., Pinho, Andreia V., Rooman, Ilse, Anderson, Matthew, Holmes, Oliver, Leonard, Conrad ... Grimmond, Sean M. (2012). Pancreatic cancer genomes reveal aberrations in axon guidance pathway genes. Nature, 491 (7424), 399-405. doi: 10.1038/nature11547
2012
Journal Article
Quantitative trait loci associated with chemical composition of the chicken carcass
Nones, K., Ledur, M. C., Zanella, E. L., Klein, C., Pinto, L. F. B., Moura, A. S. A. M. T., Ruy, D. C., Baron, E. E., Ambo, M., Campos, R. L. R., Boschiero, C., Burt, D. W. and Coutinho, L. L. (2012). Quantitative trait loci associated with chemical composition of the chicken carcass. Animal Genetics, 43 (5), 570-576. doi: 10.1111/j.1365-2052.2012.02321.x
2012
Journal Article
RON is not a prognostic marker for resectable pancreatic cancer
Tactacan, Carole M., Chang, David K., Cowley, Mark J., Humphrey, Emily S., Wu, Jianmin, Gill, Anthony J., Chou, Angela, Nones, Katia, Grimmond, Sean M., Sutherland, Robert L., Biankin, Andrew V., Daly, Roger J. and Australian Pancreratic Genome Initiative (2012). RON is not a prognostic marker for resectable pancreatic cancer. BMC Cancer, 12 (Article No.395) 395. doi: 10.1186/1471-2407-12-395
2012
Journal Article
qpure: a tool to estimate tumor cellularity from genome-wide single-nucleotide polymorphism profiles
Song, Sarah, Nones, Katia, Miller, David, Harliwong, Ivon, Kassahn, Karin S., Pinese, Mark, Pajic, Marina, Gill, Anthony J., Johns, Amber L., Anderson, Matthew, Holmes, Oliver, Leonard, Conrad, Taylor, Darrin, Wood, Scott, Xu, Qinying, Newell, Felicity, Cowley, Mark J., Wu, Jianmin, Wilson, Peter, Fink, Lynn, Biankin, Andrew V., Waddell, Nic, Grimmond, Sean M. and Pearson, John V. (2012). qpure: a tool to estimate tumor cellularity from genome-wide single-nucleotide polymorphism profiles. PLoS One, 7 (9) e45835, e45835.1-e45835.7. doi: 10.1371/journal.pone.0045835
2012
Journal Article
Effects of dietary broccoli fibre and corn oil on serum lipids, faecal bile acid excretion and hepatic gene expression in rats
Mandimika, Tafadzwa, Paturi, Gunaranjan, De Guzman, Cloe Erika, Butts, Christine A., Nones, Katia, Monro, John A., Butler, Ruth C., Joyce, Nigel I., Mishra, Suman and Ansell, Juliet (2012). Effects of dietary broccoli fibre and corn oil on serum lipids, faecal bile acid excretion and hepatic gene expression in rats. Food Chemistry, 131 (4), 1272-1278. doi: 10.1016/j.foodchem.2011.09.117
2012
Journal Article
Sleeping Beauty mutagenesis reveals cooperating mutations and pathways in pancreatic adenocarcinoma
Mann, Karen M., Ward, Jerrold M., Yew, Christopher Chin Kuan, Kovochich, Anne, Dawson, David W., Black, Michael A., Brett, Benjamin T., Sheetz, Benjamin T., Dupuy, Adam J., Chang, David K., Biankin, Andrew V., Waddell, Nicola, Kassahn, Karin S., Grimmond, Sean M., Rust, Alistair G., Adams, David J., Jenkins, Nancy A., Copeland, Neal G., Australian Pancreatic Cancer Genome Initiative, Miller, David K., Wilson, Peter J., Patch, Ann-Marie, Song, Sarah, Harliwong, Ivon, Idrisoglu, Senel, Nourse, Craig, Nourbakhsh, Ehsan, Manning, Suzanne, Wani, Shivangi ... Pearson, John V. (2012). Sleeping Beauty mutagenesis reveals cooperating mutations and pathways in pancreatic adenocarcinoma. Proceedings of the National Academy of Sciences of the United States of America, 109 (16), 5934-5941. doi: 10.1073/pnas.1202490109
2012
Conference Publication
Individualised Measurement of Tumour-Derived Circulating Dna in Patients with Pancreatic Cancer: a Marker of Prognosis and Therapeutic Response
Chin, V. T., Waddell, N., Nones, K., Quek, K., Mawson, A., Johns, A., Grimmond, S. and Biankin, A. (2012). Individualised Measurement of Tumour-Derived Circulating Dna in Patients with Pancreatic Cancer: a Marker of Prognosis and Therapeutic Response. Medical Oncology Group of Australia Incorporated Annual Scientific Meeting, Brisbane, QLD, Australia, 8-10 August 2012. Chichester, West Sussex, United Kingdom: Wiley-Blackwell. doi: 10.1111/j.1743-7563.2012.01578.x
2011
Journal Article
MicroRNAs and their isomiRs function cooperatively to target common biological pathways
Cloonan, Nicole, Wani, Shivangi, Xu, Qinying, Gu, Jian, Lea, Kristi, Heater, Sheila, Barbacioru, Catalin, Steptoe, Anita L., Martin, Hilary C., Nourbakhsh, Ehsan, Krishnan, Keerthana, Gardiner, Brooke, Wang, Xiaohui, Nones, Katia, Steen, Jason A., Matigan, Nicholas A., Wood, David L., Kassahn, Karin S., Waddell, Nic, Shepherd, Jill, Lee, Clarence, Ichikawa, Jeff, McKernan, Kevin, Bramlett, Kelli, Kuersten, Scott and Grimmond, Sean M. (2011). MicroRNAs and their isomiRs function cooperatively to target common biological pathways. Genome Biology: biology for the post-genomic era, 12 (12) R126, 1-20. doi: 10.1186/gb-2011-12-12-r126
2011
Journal Article
Genetic parameters for body weight, carcass chemical composition and yield in a broiler-layer cross developed for QTL mapping
Nunes, Beatriz do Nascimento, Ramos, Salvador Boccaletti, Savegnago, Rodrigo Pelicioni, Ledur, Mônica Corrêa, Nones, Kátia, Klein, Claudete Hara and Munari, Danísio Prado (2011). Genetic parameters for body weight, carcass chemical composition and yield in a broiler-layer cross developed for QTL mapping. Genetics and Molecular Biology, 34 (3), 429-434. doi: 10.1590/s1415-47572011005000019
2011
Journal Article
QTL for percentage of carcass and carcass parts in a broiler x layer cross
Baron, E. E., Moura, A. S. A. M. T., Ledur, M. C., Pinto, L. F. B., Boschiero, C., Ruy, D. C., Nones, K., Zanella, E. L., Rosário, M. F., Burt, D. W. and Coutinho, L. L. (2011). QTL for percentage of carcass and carcass parts in a broiler x layer cross. Animal Genetics, 42 (2), 117-124. doi: 10.1111/j.1365-2052.2010.02105.x
2011
Journal Article
Heritabilities and genetic correlations for reproductive traits in an F2 reciprocal cross chicken population
Savegnago, R.P., Buzanskas, M.E., Nunes, B.N., Ramos, S.B., Ledur, M.C., Nones, K. and Munari, D.P. (2011). Heritabilities and genetic correlations for reproductive traits in an F2 reciprocal cross chicken population. Genetics and Molecular Research, 10 (3), 1247-1254. doi: 10.4238/vol10-3gmr1053
2010
Journal Article
Maternal influences on the transmission of leukocyte gene expression profiles in population samples from Brisbane, Australia
Mason, E, Tronc, G, Nones, K, Matigian, N, Kim, J, Aronow, BJ, Wolfinger, RD, Wells, C and Gibson, G (2010). Maternal influences on the transmission of leukocyte gene expression profiles in population samples from Brisbane, Australia. PLoS ONE, 5 (12) e14479, e14479 -1-e14479-12. doi: 10.1371/journal.pone.0014479
2010
Journal Article
Mapping quantitative trait loci in Gallus gallus using principal components Mapeamento de locos de características quantitativas em Gallus gallus com utilização de componentes principais
Pinto, Luís Fernando Batista, Packer, Irineu Umberto, Ledur, Mônica Corrêa, Moura, Ana Silvia Alves Meira Tavares, Nones, Kátia and Coutinho, Luiz Lehmann (2010). Mapping quantitative trait loci in Gallus gallus using principal components Mapeamento de locos de características quantitativas em Gallus gallus com utilização de componentes principais. Revista Brasileira de Zootecnia, 39 (11), 2434-2441. doi: 10.1590/S1516-35982010001100016
2010
Journal Article
Diversity of cecal bacteria is altered in interleukin-10 gene-deficient mice before and after colitis onset and when fed polyunsaturated fatty acids.
Knoch, Bianca, Nones, Katia, Barnett, Matthew P. G., McNabb, Warren C. and Roy, Nicole C. (2010). Diversity of cecal bacteria is altered in interleukin-10 gene-deficient mice before and after colitis onset and when fed polyunsaturated fatty acids.. Microbiology, 156 (11), 3306-3316. doi: 10.1099/mic.0.041723-0
2010
Journal Article
Cecal and colonic responses in rats fed 5 or 30% corn oil diets containing either 7.5% broccoli dietary fiber or microcrystalline cellulose
Paturi, Gunaranjan, Butts, Christine, Monro, John, Nones, Katia, Martell, Sheridan, Butler, Ruth and Sutherland, Juliet (2010). Cecal and colonic responses in rats fed 5 or 30% corn oil diets containing either 7.5% broccoli dietary fiber or microcrystalline cellulose. Journal of Agricultural and Food Chemistry, 58 (10), 6510-6515. doi: 10.1021/jf100296m
2010
Journal Article
Changes in colon gene expression associated with increased colon inflammation in interleukin-10 gene-deficient mice inoculated with Enterococcus species
Barnett, Matthew P. G., McNabb, Warren C., Cookson, Adrian L., Zhu, Shuotun, Davy, Marcus, Knoch, Bianca, Nones, Katia, Hodgkinson, Alison J. and Roy, Nicole C. (2010). Changes in colon gene expression associated with increased colon inflammation in interleukin-10 gene-deficient mice inoculated with Enterococcus species. BMC Immunology, 11. doi: 10.1186/1471-2172-11-39
Funding
Current funding
Supervision
Availability
- Dr Katia Nones is:
- Available for supervision
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Supervision history
Completed supervision
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2021
Doctor Philosophy
Multi-omics: Leveraging omics data integration to identify dysregulated biology in breast cancer
Associate Advisor
Other advisors: Associate Professor Amy McCart Reed, Associate Professor Peter Simpson
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2015
Doctor Philosophy
Structural Variation in Cancer Genomes & the Identification of Personalized DNA-based Cancer Biomarkers
Associate Advisor
Media
Enquiries
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