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2018 Journal Article SNP in the Coffea arabica genome associated with coffee qualityTran, Hue T. M., Furtado, Agnelo, Vargas, Carlos Alberto Cordero, Smyth, Heather, Lee, L. Slade and Henry, Robert (2018). SNP in the Coffea arabica genome associated with coffee quality. Tree Genetics & Genomes, 14 (5) 72. doi: 10.1007/s11295-018-1282-9 |
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2018 Journal Article Transcriptome analysis highlights key differentially expressed genes involved in cellulose and lignin biosynthesis of sugarcane genotypes varying in fiber contentKasirajan, Lakshmi, Hoang, Nam V., Furtado, Agnelo, Botha, Frederik C. and Henry, Robert J. (2018). Transcriptome analysis highlights key differentially expressed genes involved in cellulose and lignin biosynthesis of sugarcane genotypes varying in fiber content. Scientific Reports, 8 (1) 11612, 11612. doi: 10.1038/s41598-018-30033-4 |
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2018 Journal Article The coffee bean transcriptome explains the accumulation of the major bean components through ripeningCheng, Bing, Furtado, Agnelo and Henry, Robert J. (2018). The coffee bean transcriptome explains the accumulation of the major bean components through ripening. Scientific Reports, 8 (1) 11414, 11414. doi: 10.1038/s41598-018-29842-4 |
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2018 Journal Article A mosaic monoploid reference sequence for the highly complex genome of sugarcaneGarsmeur, Olivier, Droc, Gaetan, Antonise, Rudie, Grimwood, Jane, Potier, Bernard, Aitken, Karen, Jenkins, Jerry, Martin, Guillaume, Charron, Carine, Hervouet, Catherine, Costet, Laurent, Yahiaoui, Nabila, Healey, Adam, Sims, David, Cherukuri, Yesesri, Sreedasyam, Avinash, Kilian, Andrzej, Chan, Agnes, Van Sluys, Marie-Anne, Swaminathan, Kankshita, Town, Christopher, Bergès, Hélène, Simmons, Blake, Glaszmann, Jean Christophe, van der Vossen, Edwin, Henry, Robert, Schmutz, Jeremy and D'Hont, Angélique (2018). A mosaic monoploid reference sequence for the highly complex genome of sugarcane. Nature Communications, 9 (1) 2638, 1-10. doi: 10.1038/s41467-018-05051-5 |
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2018 Journal Article Wheat seed transcriptome reveals genes controlling key traits for human preference and crop adaptationHenry, Robert J., Furtado, Agnelo and Rangan, Parimalan (2018). Wheat seed transcriptome reveals genes controlling key traits for human preference and crop adaptation. Current Opinion in Plant Biology, 45 (Pt B), 231-236. doi: 10.1016/j.pbi.2018.05.002 |
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2018 Journal Article The challenge of analyzing the sugarcane genomeThirugnanasambandam, Prathima P., Hoang, Nam V. and Henry, Robert J. (2018). The challenge of analyzing the sugarcane genome. Frontiers in Plant Science, 9 616, 616. doi: 10.3389/fpls.2018.00616 |
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2018 Journal Article Chloroplast phylogeny of AA genome rice speciesMohammad Moner, Ali, Furtado, Agnelo and Henry, Robert J (2018). Chloroplast phylogeny of AA genome rice species. Molecular Phylogenetics and Evolution, 127, 475-487. doi: 10.1016/j.ympev.2018.05.002 |
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2018 Journal Article Role of genomics in promoting the utilization of plant genetic resources in genebanksWambugu, Peterson W., Ndjiondjop, Marie-Noelle and Henry, Robert J. (2018). Role of genomics in promoting the utilization of plant genetic resources in genebanks. Briefings in Functional Genomics, 17 (3), 198-206. doi: 10.1093/bfgp/ely014 |
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2018 Journal Article Diversity and evolution of rice progenitors in AustraliaMoner, Ali M., Furtado, Agnelo, Chivers, Ian, Fox, Glen, Crayn, Darren and Henry, Robert J. (2018). Diversity and evolution of rice progenitors in Australia. Ecology and Evolution, 8 (8), 4360-4366. doi: 10.1002/ece3.3989 |
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2018 Journal Article There's yellow, and then there's yellow-which one is YCS?Marquardt, Annelie, Wathen-Dunn, Kate, Henry, Robert J. and Botha, Frederik C. (2018). There's yellow, and then there's yellow-which one is YCS?. International Sugar Journal, 120 (1432), 304-310. |
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2018 Journal Article De novo assembly and characterizing of the culm-derived meta-transcriptome from the polyploid sugarcane genome based on coding transcriptsHoang, Nam V., Furtado, Agnelo, Thirugnanasambandam, Prathima P., Botha, Frederik C. and Henry, Robert J. (2018). De novo assembly and characterizing of the culm-derived meta-transcriptome from the polyploid sugarcane genome based on coding transcripts. Heliyon, 4 (3) e00583, e00583. doi: 10.1016/j.heliyon.2018.e00583 |
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2018 Journal Article Annotation of the Corymbia terpene synthase gene family shows broad conservation but dynamic evolution of physical clusters relative to EucalyptusButler, Jakob B., Freeman, Jules S., Potts, Brad M., Vaillancourt, René E., Grattapaglia, Dario, Silva-Junior, Orzenil B., Simmons, Blake A., Healey, Adam L., Schmutz, Jeremy, Barry, Kerrie W., Lee, David J., Henry, Robert J., King, Graham J., Baten, Abdul and Shepherd, Mervyn (2018). Annotation of the Corymbia terpene synthase gene family shows broad conservation but dynamic evolution of physical clusters relative to Eucalyptus. Heredity, 121 (1), 1-18. doi: 10.1038/s41437-018-0058-1 |
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2018 Journal Article Use of a draft genome of coffee (Coffea arabica) to identify SNPs associated with caffeine contentTran, Hue T. M., Ramaraj, Thiruvarangan, Furtado, Agnelo, Lee, L. Slade and Henry, Robert J. (2018). Use of a draft genome of coffee (Coffea arabica) to identify SNPs associated with caffeine content. Plant Biotechnology Journal, 16 (10), 1756-1766. doi: 10.1111/pbi.12912 |
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2018 Journal Article Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus OryzaStein, Joshua C., Yu, Yeisoo, Copetti, Dario, Zwickl, Derrick J., Zhang, Li, Zhang, Chengjun, Chougule, Kapeel, Gao, Dongying, Iwata, Aiko, Goicoechea, Jose Luis, Wei, Sharon, Wang, Jun, Liao, Yi, Wang, Muhua, Jacquemin, Julie, Becker, Claude, Kudrna, Dave, Zhang, Jianwei, Londono, Carlos E. M., Song, Xiang, Lee, Seunghee, Sanchez, Paul, Zuccolo, Andrea, Ammiraju, Jetty S. S., Talag, Jayson, Danowitz, Ann, Rivera, Luis F., Gschwend, Andrea R., Noutsos, Christos ... Wing, Rod A. (2018). Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza. Nature Genetics, 50 (2), 285-296. doi: 10.1038/s41588-018-0040-0 |
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2018 Journal Article Filters of floristic exchange: How traits and climate shape the rain forest invasion of Sahul from SundaYap, Jia-Yee S., Rossetto, Maurizio, Costion, Craig, Crayn, Darren, Kooyman, Robert M., Richardson, James and Henry, Robert (2018). Filters of floristic exchange: How traits and climate shape the rain forest invasion of Sahul from Sunda. Journal of Biogeography, 45 (4), 838-847. doi: 10.1111/jbi.13143 |
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2018 Book Chapter The wild Oryza genomes prefaceMondal, Tapan K. and Henry, Robert J. (2018). The wild Oryza genomes preface. The wild Oryza genomes. (pp. XIII-XV) edited by Tapan K. Mondal and Robert J. Henry. Cham, Switzerland: Springer. |
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2018 Journal Article Towards a genetic road map of wheat-processing qualityHenry, R. J. and Wrigley, C. W. (2018). Towards a genetic road map of wheat-processing quality. Journal of Cereal Science, 79, 516-517. doi: 10.1016/j.jcs.2017.12.010 |
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2018 Book Chapter A highly efficient and reproducible Fusarium spp. inoculation method for Brachypodium distachyonRana, Anuj, Karunakaran, Aneesh, Fitzgerald, Timothy L., Sabburg, Rosalie, Aitken, Elizabeth A. B., Henry, Robert J., Powell, Jonathan J. and Kazan, Kemal (2018). A highly efficient and reproducible Fusarium spp. inoculation method for Brachypodium distachyon. Brachypodium genomics: methods and protocols. (pp. 43-55) edited by Gaurav Sablok, Hikmet Budak and Peter J. Ralph. New York, NY, United States: Humana Press. doi: 10.1007/978-1-4939-7278-4_4 |
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2018 Journal Article Evidence of inter-sectional chloroplast capture in Corymbia among sections Torellianae and MaculataeHealey, Adam, Lee, David J., Furtado, Agnelo and Henry, Robert J. (2018). Evidence of inter-sectional chloroplast capture in Corymbia among sections Torellianae and Maculatae. Australian Journal of Botany, 66 (5), 369-378. doi: 10.1071/BT18028 |
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2018 Book Wild Oryza GenomesT. K. Mondal and R. J. Henry eds. (2018). Wild Oryza Genomes. Compendium of Plant Genomes, Berlin, Germany: Springer. doi: 10.1007/978-3-319-71997-9 |
