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2021

Book Chapter

Avocado transcriptomic resources

Shaw, Lindsay, Nath, Onkar, Fletcher, Stephen, Henry, Robert, Mitter, Neena and Hayward, Alice (2021). Avocado transcriptomic resources. Comprehensive foodomics. (pp. 544-557) edited by Alejandro Cifuentes. Amsterdam, Netherlands: Elsevier BV. doi: 10.1016/b978-0-08-100596-5.22733-9

Avocado transcriptomic resources

2021

Book Chapter

Transcriptome of sugarcane, a highly complex polyploid

Thirugnanasambandam, Prathima P., Mason, Patrick J., Pazhany, Adhini S., Shanmugavel, SenthilKumar, Hoang, Nam V. and Henry, Robert J. (2021). Transcriptome of sugarcane, a highly complex polyploid. Comprehensive foodomics. (pp. 614-626) edited by Alejandro Cifuentes. Amsterdam, Netherlands: Elsevier. doi: 10.1016/b978-0-08-100596-5.22734-0

Transcriptome of sugarcane, a highly complex polyploid

2021

Book Chapter

Introduction to Transcriptomics

Henry, Robert J. (2021). Introduction to Transcriptomics. Comprehensive Foodomics. (pp. 439-439) Amsterdam, Netherlands: Elsevier. doi: 10.1016/b978-0-12-816395-5.00002-2

Introduction to Transcriptomics

2021

Book Chapter

RNA extraction for transcriptome analysis

Furtado, Agnelo and Henry, Robert J. (2021). RNA extraction for transcriptome analysis. Comprehensive foodomics. (pp. 440-450) edited by Alejandro Cifuentes. Amsterdam, Netherlands: Elsevier. doi: 10.1016/b978-0-08-100596-5.22727-3

RNA extraction for transcriptome analysis

2021

Book Chapter

Development of Transcriptome Analysis Methods

Rangan, Parimalan, Furtado, Agnelo, Henry, Robert and Gaikwad, Ambika (2021). Development of Transcriptome Analysis Methods. Comprehensive Foodomics. (pp. 462-471) Amsterdam, Netherlands: Elsevier. doi: 10.1016/b978-0-08-100596-5.22752-2

Development of Transcriptome Analysis Methods

2020

Journal Article

Comparison of long-read methods for sequencing and assembly of a plant genome

Murigneux, Valentine, Rai, Subash Kumar, Furtado, Agnelo, Bruxner, Timothy J. C., Tian, Wei, Harliwong, Ivon, Wei, Hanmin, Yang, Bicheng, Ye, Qianyu, Anderson, Ellis, Mao, Qing, Drmanac, Radoje, Wang, Ou, Peters, Brock A, Xu, Mengyang, Wu, Pei, Topp, Bruce, Coin, Lachlan J. M. and Henry, Robert J. (2020). Comparison of long-read methods for sequencing and assembly of a plant genome. GigaScience, 9 (12) giaa146. doi: 10.1093/gigascience/giaa146

Comparison of long-read methods for sequencing and assembly of a plant genome

2020

Journal Article

Variation in sugarcane biomass composition and enzymatic saccharification of leaves, internodes and roots

Mason, Patrick J., Furtado, Agnelo, Marquardt, Annelie, Hodgson-Kratky, Katrina, Hoang, Nam V., Botha, Frederik C., Papa, Gabriella, Mortimer, Jenny C., Simmons, Blake and Henry, Robert J. (2020). Variation in sugarcane biomass composition and enzymatic saccharification of leaves, internodes and roots. Biotechnology for Biofuels, 13 (1) 201, 1-19. doi: 10.1186/s13068-020-01837-2

Variation in sugarcane biomass composition and enzymatic saccharification of leaves, internodes and roots

2020

Journal Article

Pathways of photosynthesis in non-leaf tissues

Henry, Robert J., Furtado, Agnelo and Rangan, Parimalan (2020). Pathways of photosynthesis in non-leaf tissues. Biology, 9 (12) 438, 1-13. doi: 10.3390/biology9120438

Pathways of photosynthesis in non-leaf tissues

2020

Journal Article

Sequence variants linked to key traits in interspecific crosses between African and Asian rice

Badro, Hayba, Ndjiondjop, Marie-Noelle, Furtado, Agnelo and Henry, Robert (2020). Sequence variants linked to key traits in interspecific crosses between African and Asian rice. Plants, 9 (12) 1653, 1-21. doi: 10.3390/plants9121653

Sequence variants linked to key traits in interspecific crosses between African and Asian rice

2020

Book Chapter

Coffee bean transcriptome

Cheng, Bing and Henry, Robert J. (2020). Coffee bean transcriptome. Reference Module in Food Science. (pp. 627-639) Amsterdam, Netherlands: Elsevier. doi: 10.1016/b978-0-08-100596-5.22736-4

Coffee bean transcriptome

2020

Journal Article

Metabolic changes in the developing sugarcane culm associated with high yield and early high sugar content

Perlo, Virginie, Botha, Frederik C., Furtado, Agnelo, Hodgson‐Kratky, Katrina and Henry, Robert J. (2020). Metabolic changes in the developing sugarcane culm associated with high yield and early high sugar content. Plant Direct, 4 (11) e00276, e00276. doi: 10.1002/pld3.276

Metabolic changes in the developing sugarcane culm associated with high yield and early high sugar content

2020

Journal Article

Two divergent chloroplast genome sequence clades captured in the domesticated rice gene pool may have significance for rice production

Moner, Ali Mohammad, Furtado, Agnelo and Henry, Robert J. (2020). Two divergent chloroplast genome sequence clades captured in the domesticated rice gene pool may have significance for rice production. BMC Plant Biology, 20 (1) 472, 1-9. doi: 10.1186/s12870-020-02689-6

Two divergent chloroplast genome sequence clades captured in the domesticated rice gene pool may have significance for rice production

2020

Journal Article

Mobilizing crop biodiversity

McCouch, Susan, Navabi, Zahra Katy, Abberton, Michael, Anglin, Noelle L., Barbieri, Rosa Lia, Baum, Michael, Bett, Kirstin, Booker, Helen, Brown, Gerald L., Bryan, Glenn J., Cattivelli, Luigi, Charest, David, Eversole, Kellye, Freitas, Marcelo, Ghamkhar, Kioumars, Grattipaglia, Dario, Henry, Robert, Valadares Inglis, Maria Cleria, Islam, Tofazzal, Kehel, Zakaria, Kersey, Paul J., King, Graham J., Kresovich, Stephen, Marden, Emily, Mayes, Sean, Ndjiondjiop, Marie Noelle, Nguyen, Henry T., Paiva, Samuel Rezende, Papa, Roberto ... Rieseberg, Loren H. (2020). Mobilizing crop biodiversity. Molecular Plant, 13 (10), 1341-1344. doi: 10.1016/j.molp.2020.08.011

Mobilizing crop biodiversity

2020

Journal Article

Chromosome-scale assembly and annotation of the macadamia genome (Macadamia integrifolia HAES 741)

Nock, Catherine J., Baten, Abdul, Mauleon, Ramil, Langdon, Kirsty S., Topp, Bruce, Hardner, Craig, Furtado, Agnelo, Henry, Robert J. and King, Graham J. (2020). Chromosome-scale assembly and annotation of the macadamia genome (Macadamia integrifolia HAES 741). G3: Genes, Genomes, Genetics, 10 (10), 3497-3504. doi: 10.1534/g3.120.401326

Chromosome-scale assembly and annotation of the macadamia genome (Macadamia integrifolia HAES 741)

2020

Journal Article

Differential expression in leaves of Saccharum genotypes contrasting in biomass production provides evidence of genes involved in carbon partitioning

Correr, Fernando Henrique, Hosaka, Guilherme Kenichi, Barreto, Fernanda Zatti, Valadão, Isabella Barros, Balsalobre, Thiago Willian Almeida, Furtado, Agnelo, Henry, Robert James, Carneiro, Monalisa Sampaio and Margarido, Gabriel Rodrigues Alves (2020). Differential expression in leaves of Saccharum genotypes contrasting in biomass production provides evidence of genes involved in carbon partitioning. BMC Genomics, 21 (1) 673, 673. doi: 10.1186/s12864-020-07091-y

Differential expression in leaves of Saccharum genotypes contrasting in biomass production provides evidence of genes involved in carbon partitioning

2020

Other Outputs

Evaluation of the potential to expand horticultural industries in northern Australia

Cao, Shoufeng, Hine, Damian, Henry, Robert, Shaw, Lindsay and Mitter, Neena (2020). Evaluation of the potential to expand horticultural industries in northern Australia. Hermit Park, QLD, Australia: CRC for Developing Northern Australia (CRCNA).

Evaluation of the potential to expand horticultural industries in northern Australia

2020

Journal Article

Wild sorghum as a promising resource for crop improvement

Ananda, Galaihalage K. S., Myrans, Harry, Norton, Sally L., Gleadow, Roslyn, Furtado, Agnelo and Henry, Robert J. (2020). Wild sorghum as a promising resource for crop improvement. Frontiers in Plant Science, 11 1108, 1108. doi: 10.3389/fpls.2020.01108

Wild sorghum as a promising resource for crop improvement

2020

Journal Article

Innovations in Agriculture and Food Supply in Response to the COVID-19 Pandemic

Henry, Robert (2020). Innovations in Agriculture and Food Supply in Response to the COVID-19 Pandemic. Molecular Plant, 13 (8), 1095-1097. doi: 10.1016/j.molp.2020.07.011

Innovations in Agriculture and Food Supply in Response to the COVID-19 Pandemic

2020

Journal Article

Genetic structure of wild germplasm of macadamia: species assignment, diversity and phylogeographic relationships

Mai, Thuy, Alam, Mobashwer, Hardner, Craig, Henry, Robert and Topp, Bruce (2020). Genetic structure of wild germplasm of macadamia: species assignment, diversity and phylogeographic relationships. Plants, 9 (6) 714, 1-16. doi: 10.3390/plants9060714

Genetic structure of wild germplasm of macadamia: species assignment, diversity and phylogeographic relationships

2020

Journal Article

The Nagoya Protocol and historical collections of plants

Sherman, Brad and Henry, Robert James (2020). The Nagoya Protocol and historical collections of plants. Nature Plants, 6 (5), 430-432. doi: 10.1038/s41477-020-0657-8

The Nagoya Protocol and historical collections of plants