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2017

Conference Publication

Equivalence of LD-score regression and individual-level-data methods

de Vlaming, Ronald, Johannesson, Magnus, Magnusson, Patrik K. E., Ikram, M. Arfan and Visscher, Peter M. (2017). Equivalence of LD-score regression and individual-level-data methods. 47th Behavior Genetics Annual Meeting, Oslo, Norway, 28 June - 29 September 2017. New York, NY, United States: Springer . doi: 10.1007/s10519-017-9879-6

Equivalence of LD-score regression and individual-level-data methods

2017

Conference Publication

Fifty Years of Twin Studies On Psychiatric Traits Show That for the Majority of Traits Genetic Variation Is Mostly Additive

Posthuma, Danielle, Benyamin, Beben, de Leeuw, Christiaan, Sullivan, Patrick, van Bochoven, Arjen, Polderman, Tinca and Visscher, Peter (2017). Fifty Years of Twin Studies On Psychiatric Traits Show That for the Majority of Traits Genetic Variation Is Mostly Additive. 23rd Annual World Congress of Psychiatric Genetics (WCPG), Toronto Canada, 16-20 October 2015. Amsterdam, Netherlands: Elsevier.

Fifty Years of Twin Studies On Psychiatric Traits Show That for the Majority of Traits Genetic Variation Is Mostly Additive

2016

Journal Article

DNA methylation signatures of chronic low-grade inflammation are associated with complex diseases

Ligthart, Symen, Marzi, Carola, Aslibekyan, Stella, Mendelson, Michael M., Conneely, Karen N., Tanaka, Toshiko, Colicino, Elena, Waite, Lindsay L., Joehanes, Roby, Guan, Weihua, Brody, Jennifer A., Elks, Cathy, Marioni, Riccardo, Jhun, Min A., Agha, Golareh, Bressler, Jan, Ward-Caviness, Cavin K., Chen, Brian H., Huan, Tianxiao, Bakulski, Kelly, Salfati, Elias L., Fiorito, Giovanni, Wahl, Simone, Schramm, Katharina, Sha, Jin, Hernandez, Dena G., Just, Allan C., Smith, Jennifer A., Sotoodehnia, Nona ... Dehghan, Abbas (2016). DNA methylation signatures of chronic low-grade inflammation are associated with complex diseases. Genome Biology, 17 (1) 255, 255-255. doi: 10.1186/s13059-016-1119-5

DNA methylation signatures of chronic low-grade inflammation are associated with complex diseases

2016

Journal Article

Autosomal genetic control of human gene expression does not differ across the sexes

Kassam, Irfahan, Lloyd-Jones, Luke, Holloway, Alexander, Small, Kerrin S., Zeng, Biao, Bakshi, Andrew, Metspalu, Andres, Gibson, Greg, Spector, Tim D., Esko, Tonu, Montgomery, Grant W., Powell, Joseph E., Yang, Jian, Visscher, Peter M. and McRae, Allan F. (2016). Autosomal genetic control of human gene expression does not differ across the sexes. Genome Biology, 17 (1) 248, 248.1-248.10. doi: 10.1186/s13059-016-1111-0

Autosomal genetic control of human gene expression does not differ across the sexes

2016

Journal Article

Genetic variants associated with subjective well-being, depressive symptoms, and neuroticism identified through genome-wide analyses (vol 48, pg 624, 2016)

Okbay, Aysu, Baselmans, Bart M. L., De Neve, Jan-Emmanuel, Turley, Patrick, Nivard, Michel G., Fontana, Mark Alan, Meddens, S. Fleur W., Linner, Richard Karlsson, Rietveld, Cornelius A., Derringer, Jaime, Gratten, Jacob, Lee, James J., Liu, Jimmy Z., de Vlaming, Ronald, Ahluwalia, Tarunveer S., Buchwald, Jadwiga, Cavadino, Alana, Frazier-Wood, Alexis C., Furlotte, Nicholas A., Garfield, Victoria, Geisel, Marie Henrike, Gonzalez, Juan R., Haitjema, Saskia, Karlsson, Robert, van der Laan, Sander W., Ladwig, Karl-Heinz, Lahti, Jari, van der Lee, Sven J., Lind, Penelope A. ... Cesarini, David (2016). Genetic variants associated with subjective well-being, depressive symptoms, and neuroticism identified through genome-wide analyses (vol 48, pg 624, 2016). Nature Genetics, 48 (12), 1591-1591. doi: 10.1038/ng1216-1587b

Genetic variants associated with subjective well-being, depressive symptoms, and neuroticism identified through genome-wide analyses (vol 48, pg 624, 2016)

2016

Journal Article

A DNA methylation biomarker of alcohol consumption

Liu, C., Marioni, R. E., Hedman, K., Pfeiffer, L., Tsai, P. -C., Reynolds, L. M., Just, A. C., Duan, Q., Boer, C. G., Tanaka, T., Elks, C. E., Aslibekyan, S., Brody, J. A., Kuhnel, B., Herder, C., Almli, L. M., Zhi, D., Wang, Y., Huan, T., Yao, C., Mendelson, M. M., Joehanes, R., Liang, L., Love, S. -A., Guan, W., Shah, S., McRae, A. F., Kretschmer, A., Prokisch, H. ... Levy, D. (2016). A DNA methylation biomarker of alcohol consumption. Molecular Psychiatry, 23 (2), 422-433. doi: 10.1038/mp.2016.192

A DNA methylation biomarker of alcohol consumption

2016

Journal Article

Lack of direct evidence for natural selection at the candidate thrifty gene locus, PPARGC1A

Cadzow, Murray, Merriman, Tony R., Boocock, James, Dalbeth, Nicola, Stamp, Lisa K., Black, Michael A., Visscher, Peter M. and Wilcox, Phillip L. (2016). Lack of direct evidence for natural selection at the candidate thrifty gene locus, PPARGC1A. BMC Medical Genetics, 17 (1) 80, 80. doi: 10.1186/s12881-016-0341-z

Lack of direct evidence for natural selection at the candidate thrifty gene locus, PPARGC1A

2016

Journal Article

Endometriosis risk alleles at 1p36.12 act through inverse regulation of CDC42 and LINC00339

Powell, Joseph E., Fung, Jenny N., Shakhbazov, Konstantin, Sapkota, Yadav, Cloonan, Nicole, Hemani, Gibran, Hillman, Kristine M., Kaufmann, Susanne, Luong, Hien T., Bowdler, Lisa, Painter, Jodie N., Holdsworth-Carson, Sarah J., Visscher, Peter M., Dinger, Marcel E., Healey, Martin, Nyholt, Dale R., French, Juliet D., Edwards, Stacey L., Rogers, Peter A. W. and Montgomery, Grant W. (2016). Endometriosis risk alleles at 1p36.12 act through inverse regulation of CDC42 and LINC00339. Human Molecular Genetics, 25 (22), 5046-5058. doi: 10.1093/hmg/ddw320

Endometriosis risk alleles at 1p36.12 act through inverse regulation of CDC42 and LINC00339

2016

Journal Article

Leveraging genetically simple traits to identify small-effect variants for complex phenotypes

Kemper, K. E., Littlejohn, M. D., Lopdell, T., Hayes, B. J., Bennett, L. E., Williams, R. P., Xu, X. Q., Visscher, P. M., Carrick, M. J. and Goddard, M. E. (2016). Leveraging genetically simple traits to identify small-effect variants for complex phenotypes. BMC Genomics, 17 (1) 858, 858. doi: 10.1186/s12864-016-3175-3

Leveraging genetically simple traits to identify small-effect variants for complex phenotypes

2016

Journal Article

No reliable association between runs of homozygosity and schizophrenia in a well-powered replication study

Johnson, Emma C., Bjelland, Douglas W., Howrigan, Daniel P., Abdellaoui, Abdel, Breen, Gerome, Borglum, Anders, Cichon, Sven, Degenhardt, Franziska, Forstner, Andreas J., Frank, Josef, Genovese, Giulio, Heilmann-Heimbach, Stefanie, Herms, Stefan, Hoffman, Per, Maier, Wolfgang, Mattheisen, Manuel, Morris, Derek, Mowry, Bryan, Muller-Mhysok, Betram, Neale, Benjamin, Nenadic, Igor, Nothen, Markus M., O'Dushlaine, Colm, Rietschel, Marcella, Ruderfer, Douglas M., Rujescu, Dan, Schulze, Thomas G., Simonson, Matthew A., Stahl, Eli ... Keller, Matthew C. (2016). No reliable association between runs of homozygosity and schizophrenia in a well-powered replication study. PLoS Genetics, 12 (10) e1006343, e1006343. doi: 10.1371/journal.pgen.1006343

No reliable association between runs of homozygosity and schizophrenia in a well-powered replication study

2016

Journal Article

Evidence for mitochondrial genetic control of autosomal gene expression

Kassam, Irfahan, Qi, Tuan, Lloyd-Jones, Luke, Holloway, Alexander, Bonder, Marc Jan, Henders, Anjali K., Martin, Nicholas G., Powell, Joseph E., Franke, Lude, Montgomery, Grant W., Visscher, Peter M. and McRae, Allan F. (2016). Evidence for mitochondrial genetic control of autosomal gene expression. Human Molecular Genetics, 25 (24), 5332-5338. doi: 10.1093/hmg/ddw347

Evidence for mitochondrial genetic control of autosomal gene expression

2016

Journal Article

Linking the distribution of microbial deposits from the Great Salt Lake (Utah, USA) to tectonic and climatic processes

Bouton, Anthony, Vennin, Emmanuelle, Boulle, Julien, Pace, Aurelie, Bourillot, Raphael, Thomazo, Christophe, Brayard, Arnaud, Desaubliaux, Guy, Goslar, Tomasz, Yokoyama, Yusuke, Dupraz, Christophe and Visscher, Pieter T. (2016). Linking the distribution of microbial deposits from the Great Salt Lake (Utah, USA) to tectonic and climatic processes. Biogeosciences, 13 (19), 5511-5526. doi: 10.5194/bg-13-5511-2016

Linking the distribution of microbial deposits from the Great Salt Lake (Utah, USA) to tectonic and climatic processes

2016

Journal Article

Assessing the genetic overlap between BMI and cognitive function

Marioni, R. E., Yang, J., Dykiert, D., Mottus, R., Campbell, A., Davies, G., Hayward, C., Porteous, D. J., Visscher, P. M. and Deary, I. J. (2016). Assessing the genetic overlap between BMI and cognitive function. Molecular Psychiatry, 21 (10), 1477-1482. doi: 10.1038/mp.2015.205

Assessing the genetic overlap between BMI and cognitive function

2016

Journal Article

Epigenetic signatures of cigarette smoking

Joehanes, Roby, Just, Allan C., Marioni, Riccardo E., Pilling, Luke C., Reynolds, Lindsay M., Mandaviya, Pooja R., Guan, Weihua, Xu, Tao, Elks, Cathy E., Aslibekyan, Stella, Moreno-Macias, Hortensia, Smith, Jennifer A., Brody, Jennifer A., Dhingra, Radhika, Yousefi, Paul, Pankow, James S., Kunze, Sonja, Shah, Sonia H., McRae, Allan F., Lohman, Kurt, Sha, Jin, Absher, Devin M., Ferrucci, Luigi, Zhao, Wei, Demerath, Ellen W., Bressler, Jan, Grove, Megan L., Huan, Tianxiao, Liu, Chunyu ... London, Stephanie J. (2016). Epigenetic signatures of cigarette smoking. Circulation: Cardiovascular Genetics, 9 (5), 436-447. doi: 10.1161/CIRCGENETICS.116.001506

Epigenetic signatures of cigarette smoking

2016

Journal Article

52 genetic loci influencing myocardial mass

van der Harst, Pim, van Setten, Jessica, Verweij, Niek, Vogler, Georg, Franke, Lude, Maurano, Matthew T., Wang, Xinchen, Mateo Leach, Irene, Eijgelsheim, Mark, Sotoodehnia, Nona, Hayward, Caroline, Sorice, Rossella, Meirelles, Osorio, Lyytikainen, Leo-Pekka, Polasek, Ozren, Tanaka, Toshiko, Arking, Dan E., Ulivi, Sheila, Trompet, Stella, Muller-Nurasyid, Martina, Smith, Albert V., Dorr, Marcus, Kerr, Kathleen F., Magnani, Jared W., Del Greco, Fabiola, Zhang, Weihua, Nolte, Ilja M., Silva, Claudia T., Padmanabhan, Sandosh ... de Bakker, Paul I. W. (2016). 52 genetic loci influencing myocardial mass. Journal of the American College of Cardiology, 68 (13), 1435-1448. doi: 10.1016/j.jacc.2016.07.729

52 genetic loci influencing myocardial mass

2016

Journal Article

Fast set-based association analysis using summary data from GWAS identifies novel gene loci for human complex traits

Bakshi, Andrew, Zhu, Zhihong, Vinkhuyzen, Anna A. E., Hill, W. David, Mcrae, Allan F., Visscher, Peter M. and Yang, Jian (2016). Fast set-based association analysis using summary data from GWAS identifies novel gene loci for human complex traits. Scientific Reports, 6 (1) 32894, 32894. doi: 10.1038/srep32894

Fast set-based association analysis using summary data from GWAS identifies novel gene loci for human complex traits

2016

Journal Article

Concepts and misconceptions about the polygenic additive model applied to disease

Visscher, Peter M. and Wray, Naomi R. (2016). Concepts and misconceptions about the polygenic additive model applied to disease. Human Heredity, 80 (4), 165-170. doi: 10.1159/000446931

Concepts and misconceptions about the polygenic additive model applied to disease

2016

Journal Article

Genome-wide association analyses identify new risk variants and the genetic architecture of amyotrophic lateral sclerosis

van Rheenen, Wouter, Shatunov, Aleksey, Dekker, Annelot M., McLaughlin, Russell L., Diekstra, Frank P., Pulit, Sara L., van der Spek, Rick A. A., Vosa, Urmo, de Jong, Simone, Robinson, Matthew R., Yang, Jian, Fogh, Isabella, van Doormaal, Perry T. C., Tazelaar, Gijs H. P., Koppers, Max, Blokhuis, Anna M., Sproviero, William, Jones, Ashley R., Kenna, Kevin P., van Eijk, Kristel R., Harschnitz, Oliver, Schellevis, Raymond D., Brands, William J., Medic, Jelena, Menelaou, Androniki, Vajda, Alice, Ticozzi, Nicola, Lin, Kuang, Rogelj, Boris ... Veldink, Jan H. (2016). Genome-wide association analyses identify new risk variants and the genetic architecture of amyotrophic lateral sclerosis. Nature Genetics, 48 (9) 611, 1043-1048. doi: 10.1038/ng.3622

Genome-wide association analyses identify new risk variants and the genetic architecture of amyotrophic lateral sclerosis

2016

Journal Article

Across-cohort QC analyses of GWAS summary statistics from complex traits

Chen, Guo-Bo, Lee, Sang Hong, Robinson, Matthew R., Trzaskowski, Maciej, Zhu, Zhi-Xiang, Winkler, Thomas W., Day, Felix R., Croteau-Chonka, Damien C., Wood, Andrew R., Locke, Adam E., Kutalik, Zoltán, Loos, Ruth J. F., Frayling, Timothy M., Hirschhorn, Joel N., Yang, Jian, Wray, Naomi R. and Visscher, Peter M. (2016). Across-cohort QC analyses of GWAS summary statistics from complex traits. European Journal of Human Genetics, 25 (1), 137-146. doi: 10.1038/ejhg.2016.106

Across-cohort QC analyses of GWAS summary statistics from complex traits

2016

Journal Article

Microbial and diagenetic steps leading to the mineralisation of Great Salt Lake microbialites

Pace, Aurelie, Bourillot, Raphael, Bouton, Anthony, Vennin, Emmanuelle, Galaup, Serge, Bundeleva, Irina, Patrier, Patricia, Dupraz, Christophe, Thomazo, Christophe, Sansjofre, Pierre, Yokoyama, Yusuke, Franceschi, Michel, Anguy, Yannick, Pigot, Lea, Virgone, Aurelien and Visscher, Pieter T. (2016). Microbial and diagenetic steps leading to the mineralisation of Great Salt Lake microbialites. Scientific Reports, 6 31495. doi: 10.1038/srep31495

Microbial and diagenetic steps leading to the mineralisation of Great Salt Lake microbialites