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2021 Journal Article Towards efficient immunotherapy for bacterial infectionMcCulloch, Timothy R., Wells, Timothy J. and Souza-Fonseca-Guimaraes, Fernando (2021). Towards efficient immunotherapy for bacterial infection. Trends in Microbiology, 30 (2), 158-169. doi: 10.1016/j.tim.2021.05.005 |
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2021 Journal Article Effect of lemongrass essential oil against multidrug-resistant Salmonella Heidelberg and its attachment to chicken skin and meatDewi, Grace, Nair, Divek V. T., Peichel, Claire, Johnson, Timothy J., Noll, Sally and Johny, Anup Kollanoor (2021). Effect of lemongrass essential oil against multidrug-resistant Salmonella Heidelberg and its attachment to chicken skin and meat. Poultry Science, 100 (7) 101116, 1-13. doi: 10.1016/j.psj.2021.101116 |
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2021 Journal Article Mediation of interleukin-23 and tumor necrosis factor–driven reactive arthritis by Chlamydia-infected macrophages in SKG miceRomand, Xavier, Liu, Xiao, Rahman, M. Arifur, Bhuyan, Zaied Ahmed, Douillard, Claire, Arora Kedia, Reena, Stone, Nathan, Roest, Dominique, Chew, Zi Huai, Cameron, Amy J., Rehaume, Linda M., Bozon, Aurélie, Habib, Mohammed, Armitage, Charles W., Nguyen, Minh Vu Chuong, Favier, Bertrand, Beagley, Kenneth, Maurin, Max, Gaudin, Philippe, Thomas, Ranjeny, Wells, Timothy J. and Baillet, Athan (2021). Mediation of interleukin-23 and tumor necrosis factor–driven reactive arthritis by Chlamydia-infected macrophages in SKG mice. Arthritis and Rheumatology, 73 (7) art.41653, 1200-1210. doi: 10.1002/art.41653 |
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2021 Journal Article Determination of antimicrobial resistance patterns in salmonella from commercial poultry as influenced by microbiological culture and antimicrobial susceptibility testing methodsWang, Xi, Chaney, W. Evan, Pavlidis, Hilary O., McGinnis, James P., Byrd, J. Allen, Farnell, Yuhua Z., Johnson, Timothy J., McElroy, Audrey P. and Farnell, Morgan B. (2021). Determination of antimicrobial resistance patterns in salmonella from commercial poultry as influenced by microbiological culture and antimicrobial susceptibility testing methods. Microorganisms, 9 (6) 1319, 1-13. doi: 10.3390/microorganisms9061319 |
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2021 Journal Article Convergence of the turkey gut microbiota following cohabitation under commercial settingsMiller, Elizabeth A., Winfield, Brittanie, Weber, Bonnie P., Flores-Figueroa, Cristian, Munoz-Aguayo, Jeannette, Huisinga, Jared and Johnson, Timothy J. (2021). Convergence of the turkey gut microbiota following cohabitation under commercial settings. Journal of Animal Science and Biotechnology, 12 (1) 59, 1-10. doi: 10.1186/s40104-021-00580-4 |
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2021 Journal Article BamA and BamD are essential for the secretion of trimeric autotransporter adhesinsRooke, Jessica L., Icke, Christopher, Wells, Timothy J, Rossiter, Amanda E., Browning, Douglas F., Morris, Faye C., Leo, Jack C., Schütz, Monika S., Autenrieth, Ingo B., Cunningham, Adam F., Linke, Dirk and Henderson, Ian R. (2021). BamA and BamD are essential for the secretion of trimeric autotransporter adhesins. Frontiers in Microbiology, 12 628879, 1-10. doi: 10.3389/fmicb.2021.628879 |
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2021 Journal Article Environmental spread of extended spectrum beta-lactamase (ESBL) producing Escherichia coli and ESBL genes among children and domestic animals in EcuadorSalinas, Liseth, Loayza, Fernanda, Cardenas, Paul, Saraiva, Carlos, Johnson, Timothy J., Amato, Heather, Graham, Jay P. and Trueba, Gabriel (2021). Environmental spread of extended spectrum beta-lactamase (ESBL) producing Escherichia coli and ESBL genes among children and domestic animals in Ecuador. Environmental Health Perspectives, 129 (2) 027007, 1-10. doi: 10.1289/EHP7729 |
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2021 Journal Article Antibody-dependent enhancement of bacterial disease: prevalence, mechanisms and treatmentTorres, Von Vergel L., Coggon, Carrie F. and Wells, Timothy J. (2021). Antibody-dependent enhancement of bacterial disease: prevalence, mechanisms and treatment. Infection and Immunity, 89 (4) e00054-21, 1-15. doi: 10.1128/IAI.00054-21 |
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2021 Journal Article Streptococcus species enriched in the oral cavity of patients with RA are a source of peptidoglycan-polysaccharide polymers that can induce arthritis in miceMoentadj, Rabia, Wang, Yiwen, Bowerman, Kate, Rehaume, Linda, Nel, Hendrik, O Cuiv, Paraic, Stephens, Juliette, Baharom, Amalina, Maradana, Muralidhara, Lakis, Vanessa, Morrison, Mark, Wells, Timothy, Hugenholtz, Philip, Benham, Helen, Le Cao, Kim-Anh and Thomas, Ranjeny (2021). Streptococcus species enriched in the oral cavity of patients with RA are a source of peptidoglycan-polysaccharide polymers that can induce arthritis in mice. Annals of the Rheumatic Diseases, 80 (5) annrheumdis-2020-219009, annrheumdis-2020. doi: 10.1136/annrheumdis-2020-219009 |
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2020 Journal Article Structure of dual-BON domain protein DolP identifies phospholipid binding as a new mechanism for protein localizationBryant, Jack Alfred, Morris, Faye C., Knowles, Timothy J., Maderbocus, Riyaz, Heinz, Eva, Boelter, Gabriela, Alodaini, Dema, Colyer, Adam, Wotherspoon, Peter J., Staunton, Kara A., Jeeves, Mark, Browning, Douglas F., Sevastsyanovich, Yanina R., Wells, Timothy J., Rossiter, Amanda E., Bavro, Vassiliy N., Sridhar, Pooja, Ward, Douglas G., Chong, Zhi-Soon, Goodall, Emily C. A., Icke, Christopher, Teo, Alvin, Chng, Shu-Sin, Roper, David I., Lithgow, Trevor, Cunningham, Adam F., Banzhaf, Manuel, Overduin, Michael and Henderson, Ian R. (2020). Structure of dual-BON domain protein DolP identifies phospholipid binding as a new mechanism for protein localization. eLife, 9 e62614, 1-61. doi: 10.7554/elife.62614 |
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2020 Journal Article Merging metagenomics and spatial epidemiology to understand the distribution of antimicrobial resistance genes from Enterobacteriaceae in wild owlsMiller, Elizabeth A., Ponder, Julia B., Willette, Michelle, Johnson, Timothy J. and VanderWaal, Kimberly L. (2020). Merging metagenomics and spatial epidemiology to understand the distribution of antimicrobial resistance genes from Enterobacteriaceae in wild owls. Applied and Environmental Microbiology, 86 (20) e00571-20, 1-16. doi: 10.1128/AEM.00571-20 |
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2020 Journal Article Evaluation of sampling methods for the study of avian respiratory microbiotaAbundo, Michael Edward C., Ngunjiri, John M., Taylor, Kara J. M., Ji, Hana, Ghorbani, Amir, Mahesh, K. C., Elaish, Mohamed, Jang, Hyesun, Weber, Bonnie, Johnson, Timothy J. and Lee, Chang-Won (2020). Evaluation of sampling methods for the study of avian respiratory microbiota. Avian Diseases, 64 (3), 277-285. |
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2020 Journal Article Genomic landscape of multi-drug resistant avian pathogenic Escherichia coli recovered from broilersAzam, Mariya, Mohsin, Mashkoor, Johnson, Timothy J., Smith, Emily A., Johnson, Abigail, Umair, Muhammad, Saleemi, Muhammad Kashif and Sajjad-ur-Rahman, (2020). Genomic landscape of multi-drug resistant avian pathogenic Escherichia coli recovered from broilers. Veterinary Microbiology, 247 108766, 1-7. doi: 10.1016/j.vetmic.2020.108766 |
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2020 Journal Article Genomic landscape of Ornithobacterium rhinotracheale in commercial turkey production in the United StatesSmith, Emily A., Miller, Elizabeth A., Weber, Bonnie P., Aguayo, Jeannette Munoz, Figueroa, Cristian Flores, Huisinga, Jared, Nezworski, Jill, Kromm, Michelle, Wileman, Ben and Johnson, Timothy J. (2020). Genomic landscape of Ornithobacterium rhinotracheale in commercial turkey production in the United States. Applied and Environmental Microbiology, 86 (11) e02874-19, 1-9. doi: 10.1128/AEM.02874-19 |
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2020 Conference Publication A Novel Pseudomonas aeruginosa Virulence Factor Predicts CLAD and Death after Lung TransplantationDivithotawela, C., Pham, A., Ledger, E. L., Hopkins, P., Tan, M., Yerkovich, S., Wells, T. J. and Chambers, D. C. (2020). A Novel Pseudomonas aeruginosa Virulence Factor Predicts CLAD and Death after Lung Transplantation. 40th Annual Meeting and Scientific Sessions of the International Society for Heart and Lung Transplantation (ISHLT), Montreal, Canada, 22-25 April 2020. New York, NY United States: Elsevier. |
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2020 Conference Publication A Novel Pseudomonas aeruginosa Virulence Factor Predicts CLAD and Death after Lung TransplantationDivithotawela, C., Pham, A., Ledger, E. L., Hopkins, P., Tan, M., Yerkovich, S., Wells, T. J. and Chambers, D. C. (2020). A Novel Pseudomonas aeruginosa Virulence Factor Predicts CLAD and Death after Lung Transplantation. International Society for Heart and Lung Transplantation 40th Annual Meeting and Scientific Sessions, Online, 22 - 25 April 2020. Philadelphia, PA United States: Elsevier. doi: 10.1016/j.healun.2020.01.1265 |
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2020 Journal Article Emergence of a Novel <i>Salmonella enterica</i> Serotype Reading Clonal Group Is Linked to Its Expansion in Commercial Turkey Production, Resulting in Unanticipated Human Illness in North AmericaMiller, Elizabeth A., Elnekave, Ehud, Flores-Figueroa, Cristian, Johnson, Abigail, Kearney, Ashley, Munoz-Aguayo, Jeannette, Tagg, Kaitlin A., Tschetter, Lorelee, Weber, Bonnie P., Nadon, Celine A., Boxrud, Dave, Singer, Randall S., Folster, Jason P. and Johnson, Timothy J. (2020). Emergence of a Novel Salmonella enterica Serotype Reading Clonal Group Is Linked to Its Expansion in Commercial Turkey Production, Resulting in Unanticipated Human Illness in North America. Msphere, 5 (2) e00056-20. doi: 10.1128/mSphere.00056-20 |
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2020 Journal Article Treatment of life-threatening Pseudomonas aeruginosa infection by pheresis of inhibitory antibodiesDivithotawela, Chandima, Pham, Amy, Ledger, Emma L., Hopkins, Peter, Wells, Timothy J. and Chambers, Daniel (2020). Treatment of life-threatening Pseudomonas aeruginosa infection by pheresis of inhibitory antibodies. Journal of Heart and Lung Transplantation, 39 (1), 87-89. doi: 10.1016/j.healun.2019.10.001 |
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2019 Journal Article Bacterial flagellin promotes viral entry via an NF-kB and Toll Like Receptor 5 dependent pathwayBenedikz, Elizabeth K., Bailey, Dalan, Cook, Charlotte N. L., Gonçalves-Carneiro, Daniel, Buckner, Michelle M. C., Blair, Jessica M. A., Wells, Timothy J., Fletcher, Nicola F., Goodall, Margaret, Flores-Langarica, Adriana, Kingsley, Robert A., Madsen, Jens, Teeling, Jessica, Johnston, Sebastian L., MacLennan, Calman A., Balfe, Peter, Henderson, Ian R., Piddock, Laura J. V., Cunningham, Adam F. and McKeating, Jane A. (2019). Bacterial flagellin promotes viral entry via an NF-kB and Toll Like Receptor 5 dependent pathway. Scientific Reports, 9 (1) 7903. doi: 10.1038/s41598-019-44263-7 |
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2019 Journal Article Antibiotics and host-tailored probiotics similarly modulate effects on the developing avian microbiome, mycobiome, and host gene expressionWard, Tonya L., Weber, Bonnie P., Mendoza, Kristelle M., Danzeisen, Jessica L., Llop, Katharine, Lang, Kevin, Clayton, Jonathan B., Grace, Elicia, Brannon, Jeanine, Radovic, Igor, Beauclaire, Mai, Heisel, Timothy J., Knights, Dan, Cardona, Carol, Kogut, Mike, Johnson, Casey, Noll, Sally L., Arsenault, Ryan, Reed, Kent M. and Johnson, Timothy J. (2019). Antibiotics and host-tailored probiotics similarly modulate effects on the developing avian microbiome, mycobiome, and host gene expression. mBio, 10 (5) e02171-19, 1-17. doi: 10.1128/mBio.02171-19 |
