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2020 Journal Article Treatment of life-threatening Pseudomonas aeruginosa infection by pheresis of inhibitory antibodiesDivithotawela, Chandima, Pham, Amy, Ledger, Emma L., Hopkins, Peter, Wells, Timothy J. and Chambers, Daniel (2020). Treatment of life-threatening Pseudomonas aeruginosa infection by pheresis of inhibitory antibodies. Journal of Heart and Lung Transplantation, 39 (1), 87-89. doi: 10.1016/j.healun.2019.10.001 |
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2019 Journal Article Bacterial flagellin promotes viral entry via an NF-kB and Toll Like Receptor 5 dependent pathwayBenedikz, Elizabeth K., Bailey, Dalan, Cook, Charlotte N. L., Gonçalves-Carneiro, Daniel, Buckner, Michelle M. C., Blair, Jessica M. A., Wells, Timothy J., Fletcher, Nicola F., Goodall, Margaret, Flores-Langarica, Adriana, Kingsley, Robert A., Madsen, Jens, Teeling, Jessica, Johnston, Sebastian L., MacLennan, Calman A., Balfe, Peter, Henderson, Ian R., Piddock, Laura J. V., Cunningham, Adam F. and McKeating, Jane A. (2019). Bacterial flagellin promotes viral entry via an NF-kB and Toll Like Receptor 5 dependent pathway. Scientific Reports, 9 (1) 7903. doi: 10.1038/s41598-019-44263-7 |
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2019 Journal Article Antibiotics and host-tailored probiotics similarly modulate effects on the developing avian microbiome, mycobiome, and host gene expressionWard, Tonya L., Weber, Bonnie P., Mendoza, Kristelle M., Danzeisen, Jessica L., Llop, Katharine, Lang, Kevin, Clayton, Jonathan B., Grace, Elicia, Brannon, Jeanine, Radovic, Igor, Beauclaire, Mai, Heisel, Timothy J., Knights, Dan, Cardona, Carol, Kogut, Mike, Johnson, Casey, Noll, Sally L., Arsenault, Ryan, Reed, Kent M. and Johnson, Timothy J. (2019). Antibiotics and host-tailored probiotics similarly modulate effects on the developing avian microbiome, mycobiome, and host gene expression. mBio, 10 (5) e02171-19, 1-17. doi: 10.1128/mBio.02171-19 |
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2019 Journal Article A cluster of carbapenemase-producing <i>Enterobacter cloacae</i> complex ST171 at a tertiary care center demonstrating an ongoing regional threatPereira, Edwin C., Anacker, Melissa, Houseman, Jeana, Horn, Mary E., Johnson, Timothy J., Lynfield, Ruth, Vagnone, Paula Snippes, Witwer, Medora and Kline, Susan (2019). A cluster of carbapenemase-producing Enterobacter cloacae complex ST171 at a tertiary care center demonstrating an ongoing regional threat. American Journal of Infection Control, 47 (7), 767-772. doi: 10.1016/j.ajic.2018.12.016 |
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2019 Journal Article Characterization of <i>Campylobacter jejuni, Campylobacter upsaliensis,</i> and a novel <i>Campylobacter sp</i>. in a captive non-human primate zoological collectionClayton, Jonathan B., Danzeisen, Jessica L., Johnson, Timothy J., Trent, Ava M., Hayer, Shivdeep S., Murphy, Tami, Wuenschmann, Arno, Elder, Megan, Shen, Zeli, Mannion, Anthony, Bryant, Erin, Knights, Dan and Fox, James G. (2019). Characterization of Campylobacter jejuni, Campylobacter upsaliensis, and a novel Campylobacter sp. in a captive non-human primate zoological collection. Journal of Medical Primatology, 48 (2), 114-122. doi: 10.1111/jmp.12393 |
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2019 Journal Article Microbial associations and spatial proximity predict North American moose (Alces alces) gastrointestinal community compositionFountain-Jones, Nicholas M., Clark, Nicholas J., Kinsley, Amy C., Carstensen, Michelle, Forester, James, Johnson, Timothy J., Miller, Elizabeth A., Moore, Seth, Wolf, Tiffany M. and Craft, Meggan E. (2019). Microbial associations and spatial proximity predict North American moose (Alces alces) gastrointestinal community composition. Journal of Animal Ecology, 89 (3) 1365-2656.13154, 1-12. doi: 10.1111/1365-2656.13154 |
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2018 Journal Article YraP Contributes to Cell Envelope Integrity and Virulence of Salmonella enterica Serovar TyphimuriumMorris, Faye C., Wells, Timothy J., Bryant, Jack A., Schager, Anna E., Sevastsyanovich, Yanina R., Squire, Derrick J. P., Marshall, Jennifer, Isom, Georgia L., Rooke, Jessica, Maderbocus, Riyaz, Knowles, Timothy J., Overduin, Michael, Rossiter, Amanda E., Cunningham, Adam F. and Henderson, Ian R. (2018). YraP Contributes to Cell Envelope Integrity and Virulence of Salmonella enterica Serovar Typhimurium. Infection and Immunity, 86 (11) e00829-17. doi: 10.1128/IAI.00829-17 |
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2018 Journal Article Escherichia coli ST131-H22 as a Foodborne UropathogenLiu, Cindy M., Stegger, Marc, Aziz, Maliha, Johnson, Timothy J., Waits, Kara, Nordstrom, Lora, Gauld, Lori, Weaver, Brett, Rolland, Diana, Statham, Sally, Horwinski, Joseph, Sariya, Sanjeev, Davis, Gregg S., Sokurenko, Evgeni, Keim, Paul, Johnson, James R. and Price, Lance B. (2018). Escherichia coli ST131-H22 as a Foodborne Uropathogen. Mbio, 9 (4) e00470-18. doi: 10.1128/mBio.00470-18 |
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2018 Journal Article A novel method of serum resistance by Escherichia coli that causes urosepsisCoggon, Carrie F., Jiang, Andrew, Goh, Kelvin G. K., Henderson, Ian R., Schembri, Mark A. and Wells, Timothy J. (2018). A novel method of serum resistance by Escherichia coli that causes urosepsis. mBio, 9 (3) e00920-18, e00920-18. doi: 10.1128/mbio.00920-18 |
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2018 Journal Article Role of a single noncoding nucleotide in the evolution of an epidemic African clade of SalmonellaHammarlof, Disa L., Kroger, Carsten, Owen, Sian V., Canals, Rocio, Lacharme-Lora, Lizeth, Wenner, Nicolas, Schager, Anna E., Wells, Timothy J., Henderson, Ian R., Wigley, Paul, Hokamp, Karsten, Feasey, Nicholas A., Gordon, Melita A. and Hinton, Jay C. D. (2018). Role of a single noncoding nucleotide in the evolution of an epidemic African clade of Salmonella. Proceedings of the National Academy of Sciences of the United States of America, 115 (11), E2614-E2623. doi: 10.1073/pnas.1714718115 |
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2017 Journal Article Antigen localization influences the magnitude and kinetics of endogenous adaptive immune response to recombinant Salmonella vaccinesSevastsyanovich, Yanina R., Withers, David R., Marriott, Claire L., Morris, Faye C., Wells, Timothy J., Browning, Douglas F., Beriotto, Irene, Ross, Ewan, Ali, Hossam Omar, Wardius, Catherine A., Cunningham, Adam F., Henderson, Ian R. and Rossiter, Amanda E. (2017). Antigen localization influences the magnitude and kinetics of endogenous adaptive immune response to recombinant Salmonella vaccines. Infection and Immunity, 85 (12) e00593-17, e00593-17. doi: 10.1128/iai.00593-17 |
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2017 Journal Article Inactivation of Transcriptional Regulators during Within-Household Evolution of Escherichia coliKisiela, Dagmara I., Radey, Matthew, Paul, Sandip, Porter, Stephen, Polukhina, Kseniya, Tchesnokova, Veronika, Shevchenko, Sofiya, Chan, Diana, Aziz, Maliha, Johnson, Timothy J., Price, Lance B., Johnson, James R. and Sokurenko, Evgeni V. (2017). Inactivation of Transcriptional Regulators during Within-Household Evolution of Escherichia coli. Journal of Bacteriology, 199 (13) e00036. doi: 10.1128/JB.00036-17 |
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2017 Conference Publication Chlamydia-Infected Macrophages: "Trojan Horses" for Dissemination of IL-23 and TNF-Mediated Inflammation in SKG Mouse Reactive ArthritisBaillet, Athan, Bhuyan, Zaied Ahmed, Douillard, Claire, Bozon, Aurelie, Armitage, Charles, Romand, Xavier, Minh Vu Chuong Nguyen,, Favier, Bertrand, Wells, Timothy, Beagley, Kenneth and Thomas, Ranjeny (2017). Chlamydia-Infected Macrophages: "Trojan Horses" for Dissemination of IL-23 and TNF-Mediated Inflammation in SKG Mouse Reactive Arthritis. 2017 ACR/ARHP Pediatric Rheumatology Symposium, San Diego, CA, United States, 3-8 November 2017. Hoboken, NJ, United States: John Wiley & Sons. |
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2016 Journal Article Captivity humanizes the primate microbiomeClayton, Jonathan B., Vangay, Pajau, Hu Huang, , Ward, Tonya, Hillmann, Benjamin M., Al-Ghalith, Gabriel A., Travis, Dominic A., Ha Thang Long, , Bui Van Tuan, , Vo Van Minh, , Cabana, Francis, Nadler, Tilo, Toddes, Barbara, Murphy, Tami, Glander, Kenneth E., Johnson, Timothy J. and Knights, Dan (2016). Captivity humanizes the primate microbiome. Proceedings of the National Academy of Sciences of the United States of America, 113 (37), 10376-10381. doi: 10.1073/pnas.1521835113 |
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2016 Journal Article Evolutionary History of the Global Emergence of the <i>Escherichia coli</i> Epidemic Clone ST131Stoesser, Nicole, Sheppard, Anna E., Pankhurst, Louise, De Maio, Nicola, Moore, Catrin E., Sebra, Robert, Turner, Paul, Anson, Luke W., Kasarskis, Andrew, Batty, Elizabeth M., Kos, Veronica, Wilson, Daniel J., Phetsouvanh, Rattanaphone, Wyllie, David, Sokurenko, Evgeni, Manges, Amee R., Johnson, Timothy J., Price, Lance B., Peto, Timothy E. A., Johnson, James R., Didelot, Xavier, Walker, A. Sarah and Crook, Derrick W. (2016). Evolutionary History of the Global Emergence of the Escherichia coli Epidemic Clone ST131. Mbio, 7 (2) e02162-15. doi: 10.1128/mBio.02162-15 |
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2015 Journal Article Cross-species chimeras reveal BamA POTRA and β-barrel domains must be fine-tuned for efficient OMP insertionBrowning, Douglas F., Bavro, Vassiliy N., Mason, Jessica L., Sevastsyanovich, Yanina R., Rossiter, Amanda E., Jeeves, Mark, Wells, Timothy J., Knowles, Timothy J., Cunningham, Adam F., Donald, James W., Palmer, Tracy, Overduin, Michael and Henderson, Ian R. (2015). Cross-species chimeras reveal BamA POTRA and β-barrel domains must be fine-tuned for efficient OMP insertion. Molecular Microbiology, 97 (4), 646-659. doi: 10.1111/mmi.13052 |
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2014 Journal Article Chaperone-usher fimbriae in a diverse selection of Gallibacterium genomesKudirkiene, Egle, Bager, Ragnhild J., Johnson, Timothy J. and Bojesen, Anders M. (2014). Chaperone-usher fimbriae in a diverse selection of Gallibacterium genomes. Bmc Genomics, 15 1093. doi: 10.1186/1471-2164-15-1093 |
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2014 Journal Article Increased severity of respiratory infections associated with elevated anti-LPS IgG2 which inhibits serum bactericidal killingWells, Timothy J., Whitters, Deborah, Sevastsyanovich, Yanina R., Heath, Jennifer N., Pravin, John, Goodall, Margaret, Browning, Douglas F., O'Shea, Matthew K., Cranston, Amy, De Soyza, Anthony, Cunningham, Adam F., MacLennan, Calman A., Henderson, Ian R. and Stockley, Robert A. (2014). Increased severity of respiratory infections associated with elevated anti-LPS IgG2 which inhibits serum bactericidal killing. Journal of Experimental Medicine, 211 (9), 1893-1904. doi: 10.1084/jem.20132444 |
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2013 Journal Article Mutational and topological analysis of the Escherichia coli BamA proteinBrowning, Douglas F., Matthews, Sophie A., Rossiter, Amanda E., Sevastsyanovich, Yanina R., Jeeves, Mark, Mason, Jessica L., Wells, Timothy J., Wardius, Catherine A., Knowles, Timothy J., Cunningham, Adam F., Bavro, Vassiliy N., Overduin, Michael and Henderson, Ian R. (2013). Mutational and topological analysis of the Escherichia coli BamA protein. PLoS ONE, 8 (12) e84512, e84512. doi: 10.1371/journal.pone.0084512 |
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2013 Journal Article Genotypic and phenotypic characterisation of enteroaggregative Escherichia coli from children in Rio de Janeiro, BrazilFranca, Fernanda L. S., Wells, Timothy J., Browning, Douglas F., Nogueira, Raquel Tayar, Sarges, Felipe Silva, Pereira, Ana Claudia, Cunningham, Adam F., Lucheze, Kely, Paula Rosa, Ana Claudia, Henderson, Ian R. and de Luna, Maria das Gracas (2013). Genotypic and phenotypic characterisation of enteroaggregative Escherichia coli from children in Rio de Janeiro, Brazil. PLoS ONE, 8 (7) e69971, e69971. doi: 10.1371/journal.pone.0069971 |
