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2023 Journal Article A reverse transcription loop-mediated isothermal amplification assay for the detection of citrus exocortis viroid in Australian citrusChambers, Grant A., Geering, Andrew D. W., Holford, Paul, Kehoe, Monica A., Vidalakis, Georgios and Donovan, Nerida J. (2023). A reverse transcription loop-mediated isothermal amplification assay for the detection of citrus exocortis viroid in Australian citrus. Australasian Plant Pathology, 52 (2), 121-132. doi: 10.1007/s13313-023-00903-1 |
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2023 Journal Article Extreme resilience of avocado sunblotch viroid RNA in sampled avocado leaves and fruitPretorius, Lara-Simone and Geering, Andrew D. W. (2023). Extreme resilience of avocado sunblotch viroid RNA in sampled avocado leaves and fruit. Australasian Plant Pathology, 52 (1), 1-4. doi: 10.1007/s13313-022-00898-1 |
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2022 Journal Article CAULIFINDER: a pipeline for the automated detection and annotation of caulimovirid endogenous viral elements in plant genomesVassilieff, Héléna, Haddad, Sana, Jamilloux, Véronique, Choisne, Nathalie, Sharma, Vikas, Giraud, Delphine, Wan, Mariène, Serfraz, Saad, Geering, Andrew D. W., Teycheney, Pierre-Yves and Maumus, Florian (2022). CAULIFINDER: a pipeline for the automated detection and annotation of caulimovirid endogenous viral elements in plant genomes. Mobile DNA, 13 (1) 31, 1-12. doi: 10.1186/s13100-022-00288-w |
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2022 Journal Article Presence and distribution of banana bunchy top virus in LaosChittarath, Khonesavanh, Crew, Kathleen S., Geering, Andrew D. W., Rungsawang, Wasana, Kong, Gary, Pongsapich, Preyapan and Thomas, John E. (2022). Presence and distribution of banana bunchy top virus in Laos. Australasian Plant Disease Notes, 17 (1) 36. doi: 10.1007/s13314-022-00482-y |
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2022 Journal Article Genome sequence of pineapple secovirus B, a second sadwavirus reported infecting Ananas comosusLarrea-Sarmiento, Adriana, Geering, Andrew D. W., Olmedo-Velarde, Alejandro, Wang, Xupeng, Borth, Wayne, Matsumoto, Tracie K., Suzuki, Jon Y., Wall, Marisa M., Melzer, Michael, Moyle, Richard, Sharman, Murray, Hu, John and Thomas, John E. (2022). Genome sequence of pineapple secovirus B, a second sadwavirus reported infecting Ananas comosus. Archives of Virology, 167 (12), 1-4. doi: 10.1007/s00705-022-05590-9 |
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2022 Journal Article Untangling the taxonomy of dahlia mosaic virusGeering, Andrew D. W., McTaggart, Alistair R. and Teycheney, Pierre-Yves (2022). Untangling the taxonomy of dahlia mosaic virus. Archives of Virology, 167 (11), 2325-2329. doi: 10.1007/s00705-022-05567-8 |
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2022 Journal Article Detection of two poleroviruses infecting garlic (Allium sativum) in AustraliaNurulita, Sari, Geering, Andrew D. W., Crew, Kathleen S., Harper, Stephen M. and Thomas, John E. (2022). Detection of two poleroviruses infecting garlic (Allium sativum) in Australia. Australasian Plant Pathology, 51 (4), 461-465. doi: 10.1007/s13313-022-00870-z |
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2022 Journal Article Bermuda grass latent virus in Australia: genome sequence, sequence variation, and new hostsTran, Nga T., Teo, Ai Chin, Crew, Kathleen S., Thomas, John E., Campbell, Paul R. and Geering, Andrew D. W. (2022). Bermuda grass latent virus in Australia: genome sequence, sequence variation, and new hosts. Archives of Virology, 167 (5), 1317-1323. doi: 10.1007/s00705-022-05434-6 |
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2022 Journal Article Adaptation of a filter paper method for RNA template preparation for the detection of avocado sunblotch viroid by reverse transcription qPCRPretorius, Lara-Simone, Chandra, Kerri A., Jooste, Anna E.C., Motaung, Lebogang C., Parkinson, Louisamarie E. and Geering, Andrew D.W. (2022). Adaptation of a filter paper method for RNA template preparation for the detection of avocado sunblotch viroid by reverse transcription qPCR. Journal of Virological Methods, 301 114455, 114455. doi: 10.1016/j.jviromet.2022.114455 |
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2022 Journal Article An updated register of viruses and viroids that infect ornamental, turf and native plant species in AustraliaGeering, Andrew D.W. and Thomas, John E (2022). An updated register of viruses and viroids that infect ornamental, turf and native plant species in Australia. Australasian Plant Pathology, 51 (2), 135-139. doi: 10.1007/s13313-021-00849-2 |
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2022 Journal Article Viruses infecting greenhood orchids (Pterostylidinae) in Eastern AustraliaChao, Hsu-Yao, Clements, Mark A., Mackenzie, Anne M., Dietzgen, Ralf G., Thomas, John E. and Geering, Andrew D. W. (2022). Viruses infecting greenhood orchids (Pterostylidinae) in Eastern Australia. Viruses, 14 (2) 365, 365. doi: 10.3390/v14020365 |
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2022 Journal Article Development of a one-step RT-qPCR detection assay for the newly described citrus viroid VIIChambers, Grant A., Geering, Andrew D.W., Holford, Paul, Vidalakis, Georgios and Donovan, Nerida J. (2022). Development of a one-step RT-qPCR detection assay for the newly described citrus viroid VII. Journal of Virological Methods, 299 114330, 114330. doi: 10.1016/j.jviromet.2021.114330 |
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2021 Journal Article Discovery of Single Nucleotide Polymorphisms for Resistance to Abnormal Vertical Growth in MacadamiaZakeel, Mohamed Cassim Mohamed, Alam, Mobashwer, Geering, Andrew D. W., Topp, Bruce and Akinsanmi, Olufemi A. (2021). Discovery of Single Nucleotide Polymorphisms for Resistance to Abnormal Vertical Growth in Macadamia. Frontiers in Plant Science, 12 756815, 756815. doi: 10.3389/fpls.2021.756815 |
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2021 Journal Article Fungal Planet description sheets: 1284-1382Crous, P. W., Osieck, E. R., Jurjevi, Z., Boers, J., Van Iperen, A. L., Starink-Willemse, M., Dima, B., Balashov, S., Bulgakov, T. S., Johnston, P. R., Morozova, O., Pinruan, U., Sommai, S., Alvarado, P., Decock, C. A., Lebel, T., McMullan-Fisher, S., Moreno, G., Shivas, R. G., Zhao, L., Abdollahzadeh, J., Abrinbana, M., Ageev, D., Akhmetova, G., Alexandrova, A., Altes, A., Amaral, A. G. G., Angelini, C., Antonin, ... Groenewald, J. Z. (2021). Fungal Planet description sheets: 1284-1382. Persoonia, 47 (1), 178-374. doi: 10.3767/persoonia.2021.47.06 |
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2021 Journal Article Characterisation of novel endogenous geminiviral elements in macadamiaZakeel, Mohamed C. M., Geering, Andrew D. W., Thomas, John E. and Akinsanmi, Olufemi A. (2021). Characterisation of novel endogenous geminiviral elements in macadamia. BMC Genomics, 22 (1) 858, 858. doi: 10.1186/s12864-021-08174-0 |
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2021 Journal Article Genome sequence and geographic distribution of a new nepovirus infecting Stenotaphrum secundatum in AustraliaTran, Nga T., Teo, Ai Chin, Crew, Kathleen S., Campbell, Paul R., Thomas, John E. and Geering, Andrew D.W. (2021). Genome sequence and geographic distribution of a new nepovirus infecting Stenotaphrum secundatum in Australia. Virus Research, 305 198554, 198554. doi: 10.1016/j.virusres.2021.198554 |
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2021 Journal Article Insertion of badnaviral DNA in the late blight resistance gene (R1a) of brinjal eggplant (Solanum melongena)Serfraz, Saad, Sharma, Vikas, Maumus, Florian, Aubriot, Xavier, Geering, Andrew D. W. and Teycheney, Pierre-Yves (2021). Insertion of badnaviral DNA in the late blight resistance gene (R1a) of brinjal eggplant (Solanum melongena). Frontiers in Plant Science, 12 683681, 683681. doi: 10.3389/fpls.2021.683681 |
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2021 Journal Article Molecular detection of putative pathogens to determine any role in a causal relationship with abnormal vertical growth syndrome of macadamiaZakeel, Mohamed C. M., Akinsanmi, Olufemi A. and Geering, Andrew D. W. (2021). Molecular detection of putative pathogens to determine any role in a causal relationship with abnormal vertical growth syndrome of macadamia. European Journal of Plant Pathology, 161 (2), 427-437. doi: 10.1007/s10658-021-02333-5 |
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2021 Journal Article Complete genome sequences and properties of Spartina mottle virus isolates from hybrid Bermuda grass (Cynodon dactylon × Cynodon transvaalensis)Thomas, John E., Raymond, Myriam, Tran, Nga T., Crew, Kathleen S., Teo, Ai Chin and Geering, Andrew D. W. (2021). Complete genome sequences and properties of Spartina mottle virus isolates from hybrid Bermuda grass (Cynodon dactylon × Cynodon transvaalensis). Plant Pathology, 70 (5), 1062-1071. doi: 10.1111/ppa.13357 |
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2021 Journal Article Complete genome sequence of aucuba ringspot virusUke, Ayaka, Pinili, Marita S., Natsuaki, Keiko T. and Geering, Andrew D. W. (2021). Complete genome sequence of aucuba ringspot virus. Archives of Virology, 166 (4), 1227-1230. doi: 10.1007/s00705-021-04977-4 |
